prot_M-pyrifera_M_contig125321.5124.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125321.5124.1
Unique Nameprot_M-pyrifera_M_contig125321.5124.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length159
Homology
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A523NZ64_9PROT (Glycine--tRNA ligase alpha subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NZ64_9PROT)

HSP 1 Score: 242 bits (617), Expect = 1.220e-77
Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVT 149
            QVGG+DC PVSGEITYGLERIAMYLQGVDS+YDL+WS+SG   V+YGDIYRQNEVEMSA+NF+HA+ +ILF RF  CE EA R+I L LPLPAYEMMVQASHTFNLLDAR AISVTERQRYI RVR +ARAIAE+YYAAREALGFPL T
Sbjct:  152 QVGGIDCCPVSGEITYGLERIAMYLQGVDSIYDLIWSNSGTRPVSYGDIYRQNEVEMSAYNFEHANVDILFERFTHCETEAHRMIALQLPLPAYEMMVQASHTFNLLDARQAISVTERQRYIGRVRAVARAIAESYYAAREALGFPLNT 300          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A8J6QNT6_9GAMM (Glycine--tRNA ligase alpha subunit n=3 Tax=Neiella TaxID=1434025 RepID=A0A8J6QNT6_9GAMM)

HSP 1 Score: 236 bits (602), Expect = 1.960e-75
Identity = 111/156 (71.15%), Postives = 137/156 (87.82%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTGAAAAGA 156
            QVGGL+C+PV+GEITYGLERIAMYLQGVDS+YDLVW+D    +VTYGD++ QNEVE SA+NF+HA+T++LF++F+ CEAE+ +LIE GLPLPAYE +++ASH FN+LDARHAISVTERQRYILRVR LA+A+AEAYYAARE LGFP+    +  GA
Sbjct:  151 QVGGLECKPVTGEITYGLERIAMYLQGVDSIYDLVWTDGPLGKVTYGDVFHQNEVEQSAYNFEHANTDVLFKQFDQCEAESNKLIEAGLPLPAYEQVMKASHAFNMLDARHAISVTERQRYILRVRALAKAVAEAYYAAREELGFPMCNNQSQQGA 306          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: D5BUM2_NITHN (Glycine--tRNA ligase alpha subunit n=9 Tax=Nitrosococcus TaxID=1227 RepID=D5BUM2_NITHN)

HSP 1 Score: 236 bits (601), Expect = 3.560e-75
Identity = 115/150 (76.67%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTG 150
            QVGGL+CRPV+GEITYGLERIAMYLQGV SVYDL+W+D    R+TYGD++ QNEVEMS +NF+ ADTE LF  FN CEAE+ RLIE GLPLPAYEM+++ASHTFNLLDAR AISVTERQRYILRVR LARA+AEAY A REALGFP++ G
Sbjct:  157 QVGGLECRPVTGEITYGLERIAMYLQGVSSVYDLIWTDGPLGRITYGDVFHQNEVEMSTYNFEQADTESLFAWFNSCEAESKRLIEAGLPLPAYEMVLKASHTFNLLDARRAISVTERQRYILRVRALARAVAEAYLARREALGFPMLAG 306          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A3D5DJ82_9GAMM (Glycine--tRNA ligase alpha subunit n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DJ82_9GAMM)

HSP 1 Score: 235 bits (599), Expect = 1.190e-74
Identity = 116/147 (78.91%), Postives = 129/147 (87.76%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPL 147
            QVGGLDCRP+SGEITYGLERIAMYLQ VDSVYDL+WSDS    V+YGDI+ Q+EVEMSAFNF+HA  EILF+RF+DCE EA RLI+L LP P+YEMM+QASHTFNLLDARHAISVTERQRYILR+RTLA  IAE YY AR+ L FPL
Sbjct:  173 QVGGLDCRPISGEITYGLERIAMYLQEVDSVYDLIWSDSAGKVVSYGDIFHQSEVEMSAFNFEHASIEILFQRFDDCETEAIRLIDLKLPFPSYEMMIQASHTFNLLDARHAISVTERQRYILRLRTLAHTIAETYYLARKKLDFPL 319          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: G4E2W0_9GAMM (Glycine--tRNA ligase alpha subunit n=1 Tax=Thiorhodospira sibirica ATCC 700588 TaxID=765914 RepID=G4E2W0_9GAMM)

HSP 1 Score: 233 bits (595), Expect = 2.710e-74
Identity = 117/151 (77.48%), Postives = 129/151 (85.43%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTGA 151
            QVGGLDCRPVSGEITYGLERIAMYLQGV SVYDLVW+      V YGDIY QNEVE SA+NF+ ADT  LF  F+ CEA++ RL+ELGLPLPAYE +++ASHTFNLLDARHAISVTERQRYILRVR LARA+A+AYYAAREALGFPL   A
Sbjct:  150 QVGGLDCRPVSGEITYGLERIAMYLQGVASVYDLVWTQGPHGTVRYGDIYHQNEVEQSAYNFEQADTASLFAWFDTCEAQSKRLVELGLPLPAYEQVLKASHTFNLLDARHAISVTERQRYILRVRELARAVAQAYYAAREALGFPLCAAA 300          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A7C5KGN1_9GAMM (Glycine--tRNA ligase alpha subunit (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C5KGN1_9GAMM)

HSP 1 Score: 231 bits (588), Expect = 2.790e-74
Identity = 110/148 (74.32%), Postives = 130/148 (87.84%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLV 148
            QVGGLDCRPV+GEITYGLERIAMYLQGV+SVYDLVW+D  +  VTYGD++ QNEVE SA+NF+HAD + LF  F+ CE ++ RLIELGLPLPAYE +++ASH FNLLDARHAISVTERQRYILRVR LARA+A+AY+ ARE LGFP++
Sbjct:   75 QVGGLDCRPVTGEITYGLERIAMYLQGVESVYDLVWTDGPQGPVTYGDVFHQNEVEQSAYNFEHADVDFLFGLFDQCERDSKRLIELGLPLPAYERVLEASHAFNLLDARHAISVTERQRYILRVRALARAVAQAYFEAREKLGFPML 222          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: UPI000F845ECC (glycine--tRNA ligase subunit alpha n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F845ECC)

HSP 1 Score: 232 bits (591), Expect = 8.310e-74
Identity = 112/151 (74.17%), Postives = 131/151 (86.75%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTGA 151
            QVGGL+CRPV+GEITYGLER+AMY+QGVDSV+DLVWS S    +TYGD++ QNEVEMS +NF+HAD E LF  F+ CE E+ RLI  GLPLPAYE +++ASHTFNLLDARHAISVTERQ YILRVR+L+RA+AEAYYAAREALGFP+  GA
Sbjct:  151 QVGGLECRPVTGEITYGLERLAMYIQGVDSVFDLVWSKSEHGTITYGDVFHQNEVEMSTYNFEHADVESLFGWFDTCERESQRLIAAGLPLPAYEQVLKASHTFNLLDARHAISVTERQAYILRVRSLSRAVAEAYYAAREALGFPMTKGA 301          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A3M1WE33_9GAMM (Glycine--tRNA ligase alpha subunit n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1WE33_9GAMM)

HSP 1 Score: 232 bits (591), Expect = 9.390e-74
Identity = 115/151 (76.16%), Postives = 131/151 (86.75%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTGA 151
            QVGGL+CRPVSGEITYGLERIAMYLQGV+SVYDLVW+   E  VTYGD++ QNEVE S +NF+ A+TE LF  F+ CE E+ RLIE GLPLPAYE +++ASHTFNLLDARHAISVTERQRYILRVR LARA+AEAYY AREALGFP++ GA
Sbjct:  152 QVGGLECRPVSGEITYGLERIAMYLQGVESVYDLVWTRGPEGVVTYGDVFHQNEVEQSRYNFEEANTEALFAWFDTCEQESRRLIEAGLPLPAYEQVLKASHTFNLLDARHAISVTERQRYILRVRELARAVAEAYYQAREALGFPMLRGA 302          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A2N6CJD5_9GAMM (Glycine--tRNA ligase alpha subunit n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A2N6CJD5_9GAMM)

HSP 1 Score: 231 bits (590), Expect = 1.210e-73
Identity = 112/154 (72.73%), Postives = 131/154 (85.06%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTGAAAA 154
            QVGGLDCRPV+GEITYGLERIAMYLQGV+SV+DLVW+D  + RVTYGD+Y QNEVEMSAFNF+HAD + LFR+F+ CEA    L+E  LPLPAYE +++ASH FNLLDARHAISVTERQR+ILRVR LARA+A+ YY  REALGFP++   A A
Sbjct:  148 QVGGLDCRPVTGEITYGLERIAMYLQGVESVFDLVWTDGPQGRVTYGDVYHQNEVEMSAFNFEHADIDFLFRQFDHCEAACASLLEASLPLPAYERVLEASHAFNLLDARHAISVTERQRFILRVRNLARAVAQNYYQRREALGFPMLAQKAVA 301          
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Match: A0A5C7S5F2_9GAMM (Glycine--tRNA ligase alpha subunit (Fragment) n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A5C7S5F2_9GAMM)

HSP 1 Score: 227 bits (579), Expect = 2.290e-73
Identity = 111/148 (75.00%), Postives = 126/148 (85.14%), Query Frame = 0
Query:    1 QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIYRQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQASHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLV 148
            QVGGLDCRPVSGEITYGLER+AMY+Q V SVYDLVW+   +  VTYGD+Y QNEVE S +NF+HADTE LF +FN  E E+ R+ ELGLPLPAYE M++ASHTFNLLDAR AISVTERQRYILRVRTLARA+AE YYA RE LGFP++
Sbjct:   49 QVGGLDCRPVSGEITYGLERLAMYMQNVTSVYDLVWTKGPQGIVTYGDVYHQNEVEQSTYNFEHADTEALFHQFNVAERESQRMSELGLPLPAYEQMLKASHTFNLLDARKAISVTERQRYILRVRTLARAVAEGYYATREKLGFPML 196          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125321.5124.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523NZ64_9PROT1.220e-7781.21Glycine--tRNA ligase alpha subunit n=1 Tax=Proteob... [more]
A0A8J6QNT6_9GAMM1.960e-7571.15Glycine--tRNA ligase alpha subunit n=3 Tax=Neiella... [more]
D5BUM2_NITHN3.560e-7576.67Glycine--tRNA ligase alpha subunit n=9 Tax=Nitroso... [more]
A0A3D5DJ82_9GAMM1.190e-7478.91Glycine--tRNA ligase alpha subunit n=1 Tax=Gammapr... [more]
G4E2W0_9GAMM2.710e-7477.48Glycine--tRNA ligase alpha subunit n=1 Tax=Thiorho... [more]
A0A7C5KGN1_9GAMM2.790e-7474.32Glycine--tRNA ligase alpha subunit (Fragment) n=1 ... [more]
UPI000F845ECC8.310e-7474.17glycine--tRNA ligase subunit alpha n=1 Tax=Sulfuri... [more]
A0A3M1WE33_9GAMM9.390e-7476.16Glycine--tRNA ligase alpha subunit n=1 Tax=Gammapr... [more]
A0A2N6CJD5_9GAMM1.210e-7372.73Glycine--tRNA ligase alpha subunit n=1 Tax=Chromat... [more]
A0A5C7S5F2_9GAMM2.290e-7375.00Glycine--tRNA ligase alpha subunit (Fragment) n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002310Glycine-tRNA ligase, alpha subunitPRINTSPR01044TRNASYNTHGAcoord: 13..28
score: 81.25
coord: 102..118
score: 80.75
IPR002310Glycine-tRNA ligase, alpha subunitPFAMPF02091tRNA-synt_2ecoord: 1..140
e-value: 1.7E-56
score: 191.5
NoneNo IPR availableGENE3D3.30.930.10coord: 1..65
e-value: 4.3E-23
score: 83.6
NoneNo IPR availableGENE3D1.20.58.180coord: 66..146
e-value: 1.9E-34
score: 119.3
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 1..141
IPR006194Glycine-tRNA synthetase, heterodimericPROSITEPS50861AA_TRNA_LIGASE_II_GLYABcoord: 1..137
score: 45.129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125321contigM-pyrifera_M_contig125321:3..479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125321.5124.1mRNA_M-pyrifera_M_contig125321.5124.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125321 3..479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125321.5124.1 ID=prot_M-pyrifera_M_contig125321.5124.1|Name=mRNA_M-pyrifera_M_contig125321.5124.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
QVGGLDCRPVSGEITYGLERIAMYLQGVDSVYDLVWSDSGEDRVTYGDIY
RQNEVEMSAFNFDHADTEILFRRFNDCEAEAGRLIELGLPLPAYEMMVQA
SHTFNLLDARHAISVTERQRYILRVRTLARAIAEAYYAAREALGFPLVTG
AAAAGAMS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002310Gly-tRNA_ligase_asu
IPR006194Gly-tRNA-synth_heterodimer