mRNA_M-pyrifera_M_contig125310.5120.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125310.5120.1
Unique NamemRNA_M-pyrifera_M_contig125310.5120.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A7R8WA64_9CRUS (Alpha-1,3-glucosyltransferase n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8WA64_9CRUS)

HSP 1 Score: 95.9 bits (237), Expect = 1.240e-21
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    4 LVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            L +SV +VLRV++ R PHSG G  PMYGDYEAQRHWMEVT NLP+ +WY +T  N L YWGLDY
Sbjct:   44 LSLSVALVLRVIVARQPHSGEGTPPMYGDYEAQRHWMEVTWNLPVRDWYVNTTDNDLSYWGLDY 107
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BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A0G4GXE4_VITBC (Alpha-1,3-glucosyltransferase n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GXE4_VITBC)

HSP 1 Score: 93.6 bits (231), Expect = 9.280e-21
Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 1 
Query:    1 GLVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            G+VV + V+ R+ +G +P SG GV PM+GDYEAQRHWME+T NLPI +WY ++D N L+YWGLDY
Sbjct:  207 GVVVLLAVLCRLAVGVYPCSGWGVPPMHGDYEAQRHWMEITTNLPIRDWYVESDANDLQYWGLDY 271
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BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A087V1C2_STEMI (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087V1C2_STEMI)

HSP 1 Score: 88.6 bits (218), Expect = 9.990e-21
Identity = 39/65 (60.00%), Postives = 51/65 (78.46%), Query Frame = 1 
Query:    1 GLVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            G+++S++V  R  + RFP+SG G  PMYGDYEAQRHWME+T NLP+ EWY ++ +N L YWGLDY
Sbjct:   13 GVLLSIIV--RWAVSRFPYSGAGKPPMYGDYEAQRHWMEITVNLPVNEWYKNSTKNDLLYWGLDY 75
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BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A8K0DBY7_9COLE (Uncharacterized protein n=1 Tax=Ignelater luminosus TaxID=2038154 RepID=A0A8K0DBY7_9COLE)

HSP 1 Score: 92.8 bits (229), Expect = 1.650e-20
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 1 
Query:   10 VSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            V V ++LR      PHSG G  PM+GDYEAQRHWME+T NLP+ EWY++T RN LEYWGLDY
Sbjct:   14 VLVAILLRCTTSLHPHSGQGKPPMFGDYEAQRHWMEITVNLPLNEWYYNTSRNDLEYWGLDY 75
[Close]
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A087TQ59_STEMI (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Stegodyphus mimosarum TaxID=407821 RepID=A0A087TQ59_STEMI)

HSP 1 Score: 86.3 bits (212), Expect = 1.800e-20
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:   22 VVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            +++R V+ RFP+SG G   MYGDYEAQRHWME+T NLP+ EWY ++ +N L YWGLDY
Sbjct:   20 IIIRWVVSRFPYSGAGKPLMYGDYEAQRHWMEITVNLPVNEWYKNSTKNDLLYWGLDY 77
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BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A7S0DQJ9_9EUKA (Alpha-1,3-glucosyltransferase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DQJ9_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 3.060e-20
Identity = 38/58 (65.52%), Postives = 46/58 (79.31%), Query Frame = 1 
Query:   22 VVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            +V+R  +G  PHSGMG  PM+GDYEAQRHWMEVT NLP+ +WY +T  N L+YWGLDY
Sbjct:   44 IVIRCSVGAHPHSGMGKPPMFGDYEAQRHWMEVTVNLPVQDWYRNTTENDLQYWGLDY 101
[Close]
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A820MCA0_9BILA (Alpha-1,3-glucosyltransferase n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A820MCA0_9BILA)

HSP 1 Score: 83.6 bits (205), Expect = 1.150e-19
Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1 
Query:    1 GLVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            GL+ S +  LR ++ R+P+SG    PM+GD+EAQRHWME+T NLP+ EWY ++  N L YWGLDY
Sbjct:    8 GLLASAIT-LRWIVARYPYSGYNKFPMFGDFEAQRHWMEITVNLPVSEWYQNSSSNNLTYWGLDY 71
[Close]
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A0A9ZHN6_LYGHE (Alpha-1,3-glucosyltransferase n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9ZHN6_LYGHE)

HSP 1 Score: 90.1 bits (222), Expect = 1.340e-19
Identity = 39/64 (60.94%), Postives = 51/64 (79.69%), Query Frame = 1 
Query:    4 LVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            LVV ++++LRV++G + +SG G  PM+GDYEAQRHWME+T NLP+ EWY +T  N L YWGLDY
Sbjct:    3 LVVLLLLLLRVLVGLYGYSGQGKPPMFGDYEAQRHWMEITYNLPVGEWYHNTTDNDLMYWGLDY 66
[Close]
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A6A4J0A2_APOLU (Alpha-1,3-glucosyltransferase n=2 Tax=Apolygus lucorum TaxID=248454 RepID=A0A6A4J0A2_APOLU)

HSP 1 Score: 89.7 bits (221), Expect = 1.840e-19
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 1 
Query:    4 LVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            LVV +V++LRV+ G + +SG G  PM+GDYEAQRHWME+T NLP+ EWY +T  N L YWGLDY
Sbjct:    3 LVVLLVLLLRVLAGLYGYSGQGKPPMFGDYEAQRHWMEITYNLPVGEWYHNTTDNDLMYWGLDY 66
[Close]
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Match: A0A7S1XQQ6_9STRA (Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQQ6_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.090e-19
Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 1 
Query:    4 LVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWYWDTDRNQLEYWGLDY 195
            LV  V + LR  +  +PHSG    PMYGDYEAQRHWMEVT NLP+ +WY+DT  N L+YWGLDY
Sbjct:   65 LVAMVGLALRHFVSLYPHSGRHNPPMYGDYEAQRHWMEVTWNLPVRDWYFDTPENDLQYWGLDY 128
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125310.5120.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R8WA64_9CRUS1.240e-2167.19Alpha-1,3-glucosyltransferase n=1 Tax=Cyprideis to... [more]
A0A0G4GXE4_VITBC9.280e-2161.54Alpha-1,3-glucosyltransferase n=4 Tax=Vitrella bra... [more]
A0A087V1C2_STEMI9.990e-2160.00Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=S... [more]
A0A8K0DBY7_9COLE1.650e-2064.52Uncharacterized protein n=1 Tax=Ignelater luminosu... [more]
A0A087TQ59_STEMI1.800e-2062.07Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=S... [more]
A0A7S0DQJ9_9EUKA3.060e-2065.52Alpha-1,3-glucosyltransferase n=1 Tax=Amorphochlor... [more]
A0A820MCA0_9BILA1.150e-1955.38Alpha-1,3-glucosyltransferase n=1 Tax=Adineta stei... [more]
A0A0A9ZHN6_LYGHE1.340e-1960.94Alpha-1,3-glucosyltransferase n=3 Tax=Lygus hesper... [more]
A0A6A4J0A2_APOLU1.840e-1962.50Alpha-1,3-glucosyltransferase n=2 Tax=Apolygus luc... [more]
A0A7S1XQQ6_9STRA2.090e-1962.50Dolichyl-P-Glc:Man(9)GlcNAc(2)-PP-dolichol alpha-1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125310contigM-pyrifera_M_contig125310:3..282 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.9
Seed ortholog evalue2.4e-16
Seed eggNOG ortholog227086.JGI_V11_89581
Preferred nameALG6
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006091,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009060,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0015980,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0040003,GO:0042175,GO:0042281,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046527,GO:0048856,GO:0055114,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2575@1,KOG2575@2759
Ec32 ortholog descriptionDolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase, family GT57
Ec32 orthologEc-00_005450.2
EC2.4.1.267
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons2
Model size195
Cds size195
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815769.175436-CDS-M-pyrifera_M_contig125310:2..1361622815769.175436-CDS-M-pyrifera_M_contig125310:2..136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125310 3..136 -
1692277560.7575455-CDS-M-pyrifera_M_contig125310:2..1361692277560.7575455-CDS-M-pyrifera_M_contig125310:2..136Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125310 3..136 -
1622815769.1868753-CDS-M-pyrifera_M_contig125310:221..2821622815769.1868753-CDS-M-pyrifera_M_contig125310:221..282Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125310 222..282 -
1692277560.7707143-CDS-M-pyrifera_M_contig125310:221..2821692277560.7707143-CDS-M-pyrifera_M_contig125310:221..282Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125310 222..282 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125310.5120.1prot_M-pyrifera_M_contig125310.5120.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125310 3..282 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125310.5120.1

>prot_M-pyrifera_M_contig125310.5120.1 ID=prot_M-pyrifera_M_contig125310.5120.1|Name=mRNA_M-pyrifera_M_contig125310.5120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=65bp
GLVVSVVVVLRVVIGRFPHSGMGVAPMYGDYEAQRHWMEVTRNLPIWEWY
WDTDRNQLEYWGLDY
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mRNA from alignment at M-pyrifera_M_contig125310:3..282-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125310.5120.1 ID=mRNA_M-pyrifera_M_contig125310.5120.1|Name=mRNA_M-pyrifera_M_contig125310.5120.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=280bp|location=Sequence derived from alignment at M-pyrifera_M_contig125310:3..282- (Macrocystis pyrifera P11B4 male)
GGGTTGGTTGTGAGTGTTGTAGTGGTGTTGCGTGTTGTCATTGGTCGATT
TCCTCATTCTGGTACGTGGTTGGAAGGGTTTGGGGATAGGGAGTGAGGGG
GGGAAGTGGTGAAGTGAGGGAGTATGTGGGGGGTGGGTGTTTGCAGGTAT
GGGAGTGGCACCAATGTATGGAGATTACGAAGCACAGCGCCATTGGATGG
AAGTGACGAGAAATCTACCGATCTGGGAATGGTATTGGGATACAGATAGG
AACCAGTTGGAGTATTGGGGCTTAGACTAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125310:3..282-

>mRNA_M-pyrifera_M_contig125310.5120.1 ID=mRNA_M-pyrifera_M_contig125310.5120.1|Name=mRNA_M-pyrifera_M_contig125310.5120.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig125310:3..282- (Macrocystis pyrifera P11B4 male)
GGGTTGGTTGTGAGTGTTGTAGTGGTGTTGCGTGTTGTCATTGGTCGATT
TCCTCATTCTGGGGTTGGTTGTGAGTGTTGTAGTGGTGTTGCGTGTTGTC
ATTGGTCGATTTCCTCATTCTGGTATGGGAGTGGCACCAATGTATGGAGA
TTACGAAGCACAGCGCCATTGGATGGAAGTGACGAGAAATCTACCGATCT
GGGAATGGTATTGGGATACAGATAGGAACCAGTTGGAGTATTGGGGCTTA
GACTATGTATGGGAGTGGCACCAATGTATGGAGATTACGAAGCACAGCGC
CATTGGATGGAAGTGACGAGAAATCTACCGATCTGGGAATGGTATTGGGA
TACAGATAGGAACCAGTTGGAGTATTGGGGCTTAGACTAT
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