prot_M-pyrifera_M_contig125308.5118.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125308.5118.1
Unique Nameprot_M-pyrifera_M_contig125308.5118.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length57
Homology
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: A0A1W2G5L2_9BACT (Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G5L2_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 2.540e-16
Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPK 48
            MKILVILIVVSL+IAL+FLALF+WSVKSDQY DT+SP++RI YDDKP+
Sbjct:    1 MKILVILIVVSLVIALVFLALFVWSVKSDQYEDTDSPAMRIFYDDKPR 48          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: A0A1M6JA45_9BACT (Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Reichenbachiella agariperforans TaxID=156994 RepID=A0A1M6JA45_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 7.020e-11
Identity = 32/51 (62.75%), Postives = 44/51 (86.27%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDK-PKND 50
            MKI++ LI++SL++AL+FL LF+WSVKS QY DT+SP++R+L DDK PK D
Sbjct:    1 MKIIIALILISLVVALIFLWLFVWSVKSGQYDDTDSPAVRMLMDDKKPKKD 51          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: A0A3D5KLV2_9BACT (Cbb3-type cytochrome oxidase assembly protein CcoS n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D5KLV2_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 2.310e-10
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPKNDKSKSKK 56
            M I+++LI +SL IAL+FL +F W++KS QY DT +PS+R+L+DDKPK   S  KK
Sbjct:    1 MNIIIVLISISLTIALIFLGVFYWNLKSGQYEDTYTPSVRMLFDDKPKASSSTDKK 56          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: A0A1I0RJ51_9BACT (Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Roseivirga pacifica TaxID=1267423 RepID=A0A1I0RJ51_9BACT)

HSP 1 Score: 58.9 bits (141), Expect = 2.660e-10
Identity = 29/48 (60.42%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPK 48
            M ++VILI+ S+++A++FLA F+WSVKS QY DT SPS+R+L+DDK K
Sbjct:    1 MSVIVILIITSIVVAVVFLAAFLWSVKSGQYDDTYSPSVRMLFDDKKK 48          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: UPI000C14F4D5 (cbb3-type cytochrome oxidase assembly protein CcoS n=1 Tax=Reichenbachiella sp. 5M10 TaxID=1889772 RepID=UPI000C14F4D5)

HSP 1 Score: 58.5 bits (140), Expect = 2.860e-10
Identity = 30/51 (58.82%), Postives = 42/51 (82.35%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPKNDK 51
            MKI+++LI +SL++AL+FL LF+WSV+S QY DT+SP++RIL DD  K  K
Sbjct:    1 MKIILLLICISLIVALIFLWLFVWSVRSGQYDDTDSPAVRILMDDSKKKKK 51          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: UPI000D6DD8BE (cbb3-type cytochrome oxidase assembly protein CcoS n=1 Tax=Reichenbachiella versicolor TaxID=1821036 RepID=UPI000D6DD8BE)

HSP 1 Score: 58.2 bits (139), Expect = 3.980e-10
Identity = 30/48 (62.50%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPK 48
            M+I++ LIVVSL++A++FL LF+WSVKS QY DTESP++RIL+D+  K
Sbjct:    1 MEIIIGLIVVSLVVAIVFLYLFVWSVKSGQYDDTESPAVRILFDNNQK 48          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: A1ZF92_9BACT (Cytochrome oxidase maturation protein, Cbb3-type n=1 Tax=Microscilla marina ATCC 23134 TaxID=313606 RepID=A1ZF92_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 4.660e-10
Identity = 34/57 (59.65%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDK-PKNDKSKSKK 56
            M ++VILI+ S+L+A+ FL  FIWSVKS QY DT SPS+RIL+DD  PK D +K  K
Sbjct:    1 MSVIVILIIASILVAIGFLTAFIWSVKSGQYDDTYSPSVRILFDDTTPKKDLAKKSK 57          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: UPI001650714E (cbb3-type cytochrome oxidase assembly protein CcoS n=1 Tax=Flavihumibacter stibioxidans TaxID=1834163 RepID=UPI001650714E)

HSP 1 Score: 57.4 bits (137), Expect = 8.780e-10
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPKNDKS 52
            M ++V+L++ S+ +A LFL  FIWSVK+ QY D  SP +RIL+DDKP NDKS
Sbjct:    1 MGVIVLLLIASIAVAALFLGGFIWSVKNGQYDDEFSPPVRILFDDKPSNDKS 52          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: UPI000570F601 (cbb3-type cytochrome oxidase assembly protein CcoS n=1 Tax=Thermonema rossianum TaxID=55505 RepID=UPI000570F601)

HSP 1 Score: 57.4 bits (137), Expect = 1.010e-9
Identity = 26/48 (54.17%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPK 48
            M ++++L++VS  +A LF+ +F W+V+S QY DTESP++RILY+DKPK
Sbjct:    1 MSVIILLVLVSTTVAALFVGVFFWAVRSGQYEDTESPAVRILYEDKPK 48          
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Match: A0A6N9NK91_9FLAO (Cbb3-type cytochrome oxidase assembly protein CcoS n=1 Tax=Acidiluteibacter ferrifornacis TaxID=2692424 RepID=A0A6N9NK91_9FLAO)

HSP 1 Score: 57.0 bits (136), Expect = 1.540e-9
Identity = 30/56 (53.57%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    1 MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPKNDKSKSKK 56
            M +L+ILI+VSL +A+ FL  F+WSVK+ QY D  +PS+R+L+DDKPK   S ++K
Sbjct:    1 MNVLIILIIVSLTVAIGFLVAFVWSVKAGQYDDDYTPSVRMLFDDKPKETNSVNQK 56          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125308.5118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W2G5L2_9BACT2.540e-1681.25Cytochrome oxidase maturation protein, cbb3-type n... [more]
A0A1M6JA45_9BACT7.020e-1162.75Cytochrome oxidase maturation protein, cbb3-type n... [more]
A0A3D5KLV2_9BACT2.310e-1055.36Cbb3-type cytochrome oxidase assembly protein CcoS... [more]
A0A1I0RJ51_9BACT2.660e-1060.42Cytochrome oxidase maturation protein, cbb3-type n... [more]
UPI000C14F4D52.860e-1058.82cbb3-type cytochrome oxidase assembly protein CcoS... [more]
UPI000D6DD8BE3.980e-1062.50cbb3-type cytochrome oxidase assembly protein CcoS... [more]
A1ZF92_9BACT4.660e-1059.65Cytochrome oxidase maturation protein, Cbb3-type n... [more]
UPI001650714E8.780e-1057.69cbb3-type cytochrome oxidase assembly protein CcoS... [more]
UPI000570F6011.010e-954.17cbb3-type cytochrome oxidase assembly protein CcoS... [more]
A0A6N9NK91_9FLAO1.540e-953.57Cbb3-type cytochrome oxidase assembly protein CcoS... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004714Cytochrome oxidase maturation protein cbb3-typePFAMPF03597FixScoord: 3..45
e-value: 9.7E-19
score: 66.8
IPR004714Cytochrome oxidase maturation protein cbb3-typeTIGRFAMTIGR00847TIGR00847coord: 1..48
e-value: 1.3E-17
score: 61.2
IPR004714Cytochrome oxidase maturation protein cbb3-typePANTHERPTHR41532FAMILY NOT NAMEDcoord: 1..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..56
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125308contigM-pyrifera_M_contig125308:125..295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125308.5118.1mRNA_M-pyrifera_M_contig125308.5118.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125308 125..295 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125308.5118.1 ID=prot_M-pyrifera_M_contig125308.5118.1|Name=mRNA_M-pyrifera_M_contig125308.5118.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
MKILVILIVVSLLIALLFLALFIWSVKSDQYSDTESPSIRILYDDKPKND
KSKSKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004714Cyt_oxidase_maturation_cbb3