prot_M-pyrifera_M_contig125266.5113.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125266.5113.1
Unique Nameprot_M-pyrifera_M_contig125266.5113.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
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BLAST of mRNA_M-pyrifera_M_contig125266.5113.1 vs. uniprot
Match: UPI001ED8A09B (zinc finger protein 658B-like isoform X5 n=2 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8A09B)

HSP 1 Score: 49.3 bits (116), Expect = 2.280e-5
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 0 
Query:    1 QKKNLRTHIRAVHLKETPHQCSICERAFAHKHLLKRHLQVHAKE 44
            Q  NL  HIR  HLK  PH+C IC+R FA +H+L+ H  VH+ +
Sbjct:  593 QSTNLSAHIRNFHLKIKPHECGICKRRFAVRHILRTHYAVHSDD 636
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125266.5113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001ED8A09B2.280e-550.00zinc finger protein 658B-like isoform X5 n=2 Tax=I... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.160.60coord: 1..51
e-value: 3.7E-10
score: 41.6
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 19..41
e-value: 9.7E-5
score: 22.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 21..41
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 19..46
score: 11.946
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 2..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125266contigM-pyrifera_M_contig125266:32..193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125266.5113.1mRNA_M-pyrifera_M_contig125266.5113.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125266 32..193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125266.5113.1 ID=prot_M-pyrifera_M_contig125266.5113.1|Name=mRNA_M-pyrifera_M_contig125266.5113.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
QKKNLRTHIRAVHLKETPHQCSICERAFAHKHLLKRHLQVHAKESSTQAA
AANG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf