mRNA_M-pyrifera_M_contig125242.5108.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A355SMX1_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A355SMX1_9GAMM) HSP 1 Score: 324 bits (830), Expect = 4.810e-111 Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFAR+HDLKIGTIADLIHFRMV
Sbjct: 31 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARQHDLKIGTIADLIHFRMV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A2E7C846_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=10 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C846_9GAMM) HSP 1 Score: 318 bits (816), Expect = 7.710e-107 Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAADHVSAAH+NFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVP+DIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFAR H LKIGTIADLIHFRMV
Sbjct: 31 EGVVMVAADHVSAAHINFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPSDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARSHGLKIGTIADLIHFRMV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A2D5F6I4_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5F6I4_9GAMM) HSP 1 Score: 299 bits (765), Expect = 4.620e-99 Identity = 156/171 (91.23%), Postives = 162/171 (94.74%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAA+HV+A HVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEA EGIDTGISAADRARTVQAAVAP A P+DIVQPGHIFPLT +PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTPEG+LADG ALVEFA +H LKIGTIADLIHFRMV
Sbjct: 31 EGVVMVAAEHVTAQHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEATEGIDTGISAADRARTVQAAVAPHAKPSDIVQPGHIFPLTVVPGGVLTRAGHTEAASDYARLAGLLPAAVIADILTPEGVLADGAALVEFAHKHGLKIGTIADLIHFRMV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A6C0U589_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U589_9GAMM) HSP 1 Score: 295 bits (755), Expect = 1.570e-97 Identity = 156/171 (91.23%), Postives = 160/171 (93.57%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAA+HV A VNFMARQARGLVCL LTEERCRQLDLPPMV AA GEKSNFTLSIEAA GIDTGISAADRARTVQAAVAP AVP DIVQPGHIFPLTA+PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTPEG+LADGPALVEFA RH+LKIGTIADLIHFRMV
Sbjct: 31 EGVVMVAAEHVDAGQVNFMARQARGLVCLTLTEERCRQLDLPPMVAAARGEKSNFTLSIEAAVGIDTGISAADRARTVQAAVAPHAVPADIVQPGHIFPLTAVPGGVLTRAGHTEAASDYAHLAGLLPAAVIADILTPEGVLADGPALVEFAARHELKIGTIADLIHFRMV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: UPI0019D3C6ED (3,4-dihydroxy-2-butanone-4-phosphate synthase n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3C6ED) HSP 1 Score: 286 bits (733), Expect = 2.980e-94 Identity = 150/170 (88.24%), Postives = 155/170 (91.18%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRM 510
EGVVMVAA+H A HVNFMARQARGLVCL LTE+RCRQLDLPPMV AHGEKSNFTLSIEAAEGIDTGISAADRARTVQ AVAP AV DIVQPGHIFPLTA+PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTP G LADGPALVEFA +H LKIGTIADLIHFR+
Sbjct: 31 EGVVMVAAEHCDAGHVNFMARQARGLVCLTLTEDRCRQLDLPPMVAKAHGEKSNFTLSIEAAEGIDTGISAADRARTVQVAVAPHAVAADIVQPGHIFPLTAMPGGVLTRAGHTEAASDYARLAGLLPAAVIADILTPAGELADGPALVEFAEQHQLKIGTIADLIHFRL 200
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A5C9A4B9_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=3 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A4B9_9GAMM) HSP 1 Score: 286 bits (731), Expect = 5.990e-94 Identity = 149/170 (87.65%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRM 510
EGVVMVAA+H A+HVNFMARQARGLVCL LTE+RCRQLDLPPMV A GEKSNFTLSIEAA GIDTGISAADRARTVQAAVAP AVP DIVQPGHIFPLTA+PGGVLTRAGHTEAASDYA LAGL+PAAVIADILTP G LADGPALVEFA RH LKIGT+ADLIHFR+
Sbjct: 31 EGVVMVAAEHCDASHVNFMARQARGLVCLTLTEDRCRQLDLPPMVSEARGEKSNFTLSIEAAVGIDTGISAADRARTVQAAVAPHAVPADIVQPGHIFPLTAMPGGVLTRAGHTEAASDYARLAGLMPAAVIADILTPAGELADGPALVEFAARHQLKIGTVADLIHFRL 200
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A2N5Y011_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A2N5Y011_9GAMM) HSP 1 Score: 285 bits (728), Expect = 1.930e-93 Identity = 151/171 (88.30%), Postives = 157/171 (91.81%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAA+HV A HVNFMARQARGLVCLALTEERC+QL+LPPMV GEKSNFTLSIEA+ GIDTGISAADRARTV AAVAPQAVP DIVQPGHIFPLTA+PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTPEG+LADGPALVEFA RH LKIGTIA LIH RMV
Sbjct: 31 EGVVMVAAEHVDAQHVNFMARQARGLVCLALTEERCQQLNLPPMVAEGRGEKSNFTLSIEASVGIDTGISAADRARTVLAAVAPQAVPGDIVQPGHIFPLTAMPGGVLTRAGHTEAASDYAGLAGLLPAAVIADILTPEGVLADGPALVEFAARHGLKIGTIASLIHHRMV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A2N5X2D5_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X2D5_9GAMM) HSP 1 Score: 283 bits (724), Expect = 7.320e-93 Identity = 150/171 (87.72%), Postives = 156/171 (91.23%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAA+H A+HVNFMARQARGLVCL LTEERCRQLDLPPMV AA GEKSNFTLSIEA++GIDTGISAADRA TVQAAVAP AVP DIVQPGHIFPL +PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTPEG LADGPAL EFA R+ LKIGTIADLIHFRMV
Sbjct: 31 EGVVMVAAEHCDASHVNFMARQARGLVCLTLTEERCRQLDLPPMVEAAIGEKSNFTLSIEASQGIDTGISAADRALTVQAAVAPHAVPADIVQPGHIFPLEVVPGGVLTRAGHTEAASDYARLAGLLPAAVIADILTPEGTLADGPALAEFAARNRLKIGTIADLIHFRMV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A3L7E261_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase n=2 Tax=Seongchinamella TaxID=2919372 RepID=A0A3L7E261_9GAMM) HSP 1 Score: 282 bits (722), Expect = 1.470e-92 Identity = 150/171 (87.72%), Postives = 154/171 (90.06%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAA+H A HVNFMARQARGLVCL LTEERCRQLDLPPMV A GEKSNFTLSIEAA GIDTGISAADRA TVQAAVAP AVP DIVQPGHIFPLTA+PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTPEG LADGPAL EFA + LKIGTIADLIHFR+V
Sbjct: 31 EGVVMVAAEHCDAKHVNFMARQARGLVCLTLTEERCRQLDLPPMVDGAMGEKSNFTLSIEAAVGIDTGISAADRAHTVQAAVAPHAVPADIVQPGHIFPLTAMPGGVLTRAGHTEAASDYARLAGLLPAAVIADILTPEGTLADGPALAEFAAGNGLKIGTIADLIHFRLV 201
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Match: A0A7Y1ZHK2_9GAMM (3,4-dihydroxy-2-butanone 4-phosphate synthase (Fragment) n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A7Y1ZHK2_9GAMM) HSP 1 Score: 277 bits (708), Expect = 1.590e-92 Identity = 144/171 (84.21%), Postives = 153/171 (89.47%), Query Frame = 1
Query: 1 EGVVMVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNFTLSIEAAEGIDTGISAADRARTVQAAVAPQAVPTDIVQPGHIFPLTALPGGVLTRAGHTEAASDYAALAGLLPAAVIADILTPEGLLADGPALVEFARRHDLKIGTIADLIHFRMV 513
EGVVMVAA+H A HVNFMAR+ARGL+CL LTEERC QLDLPPMV A GEKSNFTLSIEAAEGIDTGISAADRA TVQ AVAP AVP DIVQPGHIFPLTA+PGGVLTRAGHTEAASDYA LAGLLPAAVIADILTPEG +ADGPAL +FA H LK+G+IADLIH+RMV
Sbjct: 31 EGVVMVAAEHCEAKHVNFMARRARGLICLTLTEERCAQLDLPPMVDDAQGEKSNFTLSIEAAEGIDTGISAADRALTVQVAVAPHAVPADIVQPGHIFPLTAMPGGVLTRAGHTEAASDYARLAGLLPAAVIADILTPEGTVADGPALADFAAEHGLKMGSIADLIHYRMV 201 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125242.5108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125242.5108.1 >prot_M-pyrifera_M_contig125242.5108.1 ID=prot_M-pyrifera_M_contig125242.5108.1|Name=mRNA_M-pyrifera_M_contig125242.5108.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp MVAADHVSAAHVNFMARQARGLVCLALTEERCRQLDLPPMVPAAHGEKSNback to top mRNA from alignment at M-pyrifera_M_contig125242:2..514+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125242.5108.1 ID=mRNA_M-pyrifera_M_contig125242.5108.1|Name=mRNA_M-pyrifera_M_contig125242.5108.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig125242:2..514+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125242:2..514+ >mRNA_M-pyrifera_M_contig125242.5108.1 ID=mRNA_M-pyrifera_M_contig125242.5108.1|Name=mRNA_M-pyrifera_M_contig125242.5108.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig125242:2..514+ (Macrocystis pyrifera P11B4 male)back to top |