mRNA_M-pyrifera_M_contig12524.5107.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12524.5107.1
Unique NamemRNA_M-pyrifera_M_contig12524.5107.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: D8LBR2_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR2_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 2.040e-74
Identity = 131/185 (70.81%), Postives = 154/185 (83.24%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKEPAPVVDPPT-GLRFEFEQQGVPRSTLKKLIAMEVEHFQSG-ANLKVHSRR 549
            +HVVTRWYRPPELMLSPNGFYGF+VD+WSVGCIFGELLGRRPLFPGSSF +QLSLIFDV+GAP  EEV HIRGAQARKFL+KL G+A V F+++LPG PADAASLL+ LLL DP+KR TP E LRH FF  LR+  +  V P   GL FEFE++G PRS LK+LIA E++HFQ+G ANL +H ++
Sbjct:  176 EHVVTRWYRPPELMLSPNGFYGFAVDLWSVGCIFGELLGRRPLFPGSSFVNQLSLIFDVLGAPAPEEVAHIRGAQARKFLDKLDGKAAVPFTEVLPGIPADAASLLKGLLLLDPVKRFTPREALRHPFFDQLRERASLDVAPAAAGLEFEFEKKGFPRSRLKELIAKEIDHFQAGGANLTLHPKK 360
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: A0A6H5KC20_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC20_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 1.910e-72
Identity = 128/185 (69.19%), Postives = 153/185 (82.70%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKEPAPVVDPPT-GLRFEFEQQGVPRSTLKKLIAMEVEHFQSG-ANLKVHSRR 549
            +HVVTRWYRPPELMLSPNGFYGF+VD+WSVGC+FGELLGRRPLFPGSSF +QLSLIFDV+GAP   EV +IRGAQARKFL+KL G+A V F+++LPG PADAASLL+ LLL DP+KR TP E LRH FF  LR+  +  V P   GL FEFE++G PRS LK+LIA E++HFQ+G ANL +H ++
Sbjct:  156 EHVVTRWYRPPELMLSPNGFYGFAVDLWSVGCVFGELLGRRPLFPGSSFVNQLSLIFDVLGAPDPGEVAYIRGAQARKFLDKLDGKAAVPFTEVLPGIPADAASLLKGLLLLDPVKRFTPREALRHPFFDQLRERASLDVAPAAAGLEFEFEKKGFPRSRLKELIAKEIDHFQAGGANLTLHPKK 340
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: A0A7S3XUM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XUM8_HETAK)

HSP 1 Score: 191 bits (484), Expect = 5.550e-51
Identity = 96/179 (53.63%), Postives = 122/179 (68.16%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKEPAPVVDPP---TGLRFEFE-QQGVPRSTLKKLIAMEVEHFQSGA 525
            +HVVTRWYRPPELML P+G YGF VD+WS GCIF E+LGR+PLFPG +F  QL+LIFDVIGAP AE+V HIR +QARKFL+ +  R  V F++L PGA A A  LL   L+F P  R T  E L H +F  LR    P  +PP   +G  F+FE  + + R  +K+L+  EV+ F++ A
Sbjct:  193 EHVVTRWYRPPELMLCPDGLYGFDVDIWSSGCIFAEMLGRKPLFPGKNFVHQLTLIFDVIGAPDAEDVAHIRNSQARKFLDSVADRLRVPFAELFPGATAPAVDLLERFLVFHPANRMTIDECLDHPYFDPLRTGETPS-EPPVMSSGFEFDFEADETITRLQMKQLVMREVDSFRAEA 370
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: D8LJT1_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT1_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 5.040e-50
Identity = 94/178 (52.81%), Postives = 122/178 (68.54%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKE---PAPVVDPPTGLRFEFEQQGVPRSTLKKLIAMEVEHFQSGA 525
            +HVVTRWYRPPELML P+G YG++VD+WSVGCIF ELLGR PLFPG +F DQL+LIFD++G+P   EV HIR +QA+KFLE ++ R  V +++L  GA   A  LL  LL+F P  R +  E L H +F  LRK    P P V P  G  F+FE + + R  LKK+I  EV++ +S +
Sbjct:  232 EHVVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAELLGRHPLFPGKNFMDQLTLIFDLVGSPKPHEVSHIRNSQAKKFLETMQDRVKVPYAELFAGASEHAIDLLEGLLVFHPPCRLSVDEALEHPYFHPLRKSDTNPDPDVSP--GFEFDFESKPLCRVQLKKMILAEVKNNRSNS 407
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: A0A835Z9A0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9A0_9STRA)

HSP 1 Score: 187 bits (476), Expect = 9.940e-50
Identity = 92/170 (54.12%), Postives = 116/170 (68.24%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKEPAPVVDPPT--GLRFEFEQQGVPRSTLKKLIAMEV 504
            +HVVTRWYRPPELML P+G Y ++VD+WSVGCIF ELLGR PLFPG++F DQL+LIFDV+G+P+  EV HIR  QAR+FL+ + G+    ++ L P A   A  LL  LL+FDP KR +  + L H +F  LR       DPP   GL F+FE Q + R  LK+LI  EV
Sbjct:  205 EHVVTRWYRPPELMLCPDGLYTYAVDLWSVGCIFAELLGRAPLFPGTNFVDQLTLIFDVVGSPSQHEVAHIRNNQARRFLDSMAGKDKQPYAALFPQASEQAIDLLEHLLVFDPPKRLSVADALDHPYFDALRTTEGLREDPPVAVGLEFDFESQPMARLQLKQLILQEV 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: A0A7S2CNX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNX5_9STRA)

HSP 1 Score: 184 bits (467), Expect = 3.760e-49
Identity = 90/177 (50.85%), Postives = 115/177 (64.97%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLR--KEPAPVVDPPTGLRFEFEQQGVPRSTLKKLIAMEVEHFQSGA 525
            QHVVTRWYRPPELML P+G YGFSVDMWS GCI  EL+ R+PLFPG +F  QL+LIF++IGAP  + V HI   QA KFL+ +  +  V F DL   AP+   SLL  LL+F+P+KR +  E L  ++F      KE +P V P     F+FE   +P++ LK+LI  E+  FQ  A
Sbjct:  161 QHVVTRWYRPPELMLCPDGRYGFSVDMWSAGCIMAELIARKPLFPGKNFVHQLTLIFNIIGAPEKDNVSHITNKQAMKFLQSVSNKPKVMFRDLYSSAPSTVTSLLEELLVFEPVKRMSAQEALNDIYFAPFEPEKETSPPVHP--DFNFDFENGNLPKNALKRLILDEIAAFQKEA 335
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: A0A4D9DEH4_9STRA (Protein kinase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEH4_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.190e-45
Identity = 91/183 (49.73%), Postives = 120/183 (65.57%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRK-----------EPAPVVDPPTGLRFEFEQQGVPRSTLKKLIAMEVEHFQ 516
            +HVVTRWYRPPELML P+G Y ++VDMWSVGCIF ELLGR+PLFPG +F  QL+LIFDVIGAP  +EV H++ +QA++FL+ +  +  V F+ L P A  +A SLL SLL+F+P  R T  + L H +F  LR            + A    PP  L F+FE   + +  LK++I  EVE F+
Sbjct:  204 EHVVTRWYRPPELMLCPDGLYDYAVDMWSVGCIFAELLGRKPLFPGKNFVHQLTLIFDVIGAPRPQEVAHVKSSQAKRFLDSVAAKKKVPFATLFPEASREALSLLNSLLVFEPAHRLTVDQALGHKYFEPLRHSVQLQQQQLAADAAQAARPPPKLDFDFETGHLNKGQLKQMIQREVESFR 386
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: D8LJT0_ECTSI (Mitogen-activated protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT0_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 2.120e-45
Identity = 89/177 (50.28%), Postives = 115/177 (64.97%), Query Frame = 1 
Query:    7 VVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFF----GDLRKEPAPVVDPPTGLRFEFEQQGVPRSTLKKLIAMEVEHFQSGA 525
             VTRWYRPPELML P+G YG++VD+WSVGCIF E+LGR+P FPG  F+ QLSLIFD +G+P   EV HIR  +A +FLE ++GR  V F+DLLP A   + +LL  LL+FDP  R +  E L H +F    G +   P P V P  GL F+FE + + +  L+ +I  EV  F   A
Sbjct:  190 AVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASEASLALLERLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAP--GLDFDFESEPMHQEQLRNMILQEVALFHGYA 364
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: A0A6H5K027_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K027_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 5.150e-45
Identity = 88/177 (49.72%), Postives = 113/177 (63.84%), Query Frame = 1 
Query:    7 VVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFF----GDLRKEPAPVVDPPTGLRFEFEQQGVPRSTLKKLIAMEVEHFQSGA 525
             VTRWYRPPELML P+G YG++VD+WSVGCIF E+LGR+P FPG  F+ QLSLIFD +G+P   EV HIR  +A +FLE ++GR  V F+DLLP A   +  LL  LL+FDP  R +  E L H +F    G +   P P V P  G  F+FE + + +  L+ +I  EV  F   A
Sbjct:  245 AVTRWYRPPELMLCPDGLYGYAVDLWSVGCIFAEMLGRQPFFPGQDFKKQLSLIFDAVGSPQPHEVAHIRNPEAIRFLESMQGRVKVPFADLLPNASVASVDLLEGLLVFDPPCRFSADEALSHRYFQPLSGRIHVPPDPEVAP--GFDFDFESEPMHQEQLRDMILQEVALFHGHA 419
[Close]
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Match: T0SDS7_SAPDV (CMGC/MAPK protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SDS7_SAPDV)

HSP 1 Score: 173 bits (439), Expect = 9.940e-43
Identity = 85/188 (45.21%), Postives = 118/188 (62.77%), Query Frame = 1 
Query:    1 QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFEDQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPADAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKEPAPV-VDPPTGLRFEFEQQGVPRSTLKKLIAMEVEHFQSGANLKVHSRRTAHA 561
            +HVVTRWYR PELML P+G Y   VDMWS+GCIF E+LGR+ +FPG +F  QL+LIFDVIG P   +V  ++ AQA++F++ L  +  V F  + P A  +A  LL  +L FDP+ RC+  E L+H +   + +   P  V  PT + F FEQ+ + R+ L +LI  +VE F   ++    S RT HA
Sbjct:  206 EHVVTRWYRAPELMLQPDGHYSTGVDMWSIGCIFAEMLGRKAIFPGKNFIHQLTLIFDVIGTPCTSDVKKMKSAQAQRFIKSLGKKPKVPFRTVFPSATPEAIDLLERMLHFDPVSRCSVDEALKHPYMQAIERRYTPKDVTVPTHISFAFEQENLGRNELVQLIVSQVEGFSGRSSQTPASIRTIHA 393
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12524.5107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBR2_ECTSI2.040e-7470.81Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5KC20_9PHAE1.910e-7269.19Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S3XUM8_HETAK5.550e-5153.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LJT1_ECTSI5.040e-5052.81Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z9A0_9STRA9.940e-5054.12Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2CNX5_9STRA3.760e-4950.85Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A4D9DEH4_9STRA1.190e-4549.73Protein kinase domain-containing protein n=2 Tax=M... [more]
D8LJT0_ECTSI2.120e-4550.28Mitogen-activated protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5K027_9PHAE5.150e-4549.72Protein kinase domain-containing protein n=1 Tax=E... [more]
T0SDS7_SAPDV9.940e-4345.21CMGC/MAPK protein kinase n=2 Tax=Saprolegnia TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12524contigM-pyrifera_M_contig12524:3828..8001 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.8
Seed ortholog evalue9.6e-46
Seed eggNOG ortholog2880.D8LJT1
Preferred nameMPK11
KEGG koko:K04371,ko:K08293,ko:K14512
KEGG Pathwayko01521,ko01522,ko01524,ko04010,ko04011,ko04012,ko04013,ko04014,ko04015,ko04016,ko04022,ko04024,ko04062,ko04066,ko04068,ko04071,ko04072,ko04075,ko04114,ko04140,ko04150,ko04151,ko04210,ko04214,ko04218,ko04261,ko04270,ko04320,ko04350,ko04360,ko04370,ko04371,ko04380,ko04510,ko04520,ko04540,ko04550,ko04611,ko04620,ko04621,ko04650,ko04657,ko04658,ko04659,ko04660,ko04662,ko04664,ko04666,ko04668,ko04713,ko04720,ko04722,ko04723,ko04724,ko04725,ko04726,ko04730,ko04810,ko04910,ko04912,ko04914,ko04915,ko04916,ko04917,ko04919,ko04921,ko04926,ko04930,ko04933,ko04934,ko04960,ko05010,ko05020,ko05034,ko05131,ko05132,ko05133,ko05140,ko05142,ko05145,ko05152,ko05160,ko05161,ko05164,ko05165,ko05167,ko05200,ko05203,ko05205,ko05210,ko05211,ko05212,ko05213,ko05214,ko05215,ko05216,ko05218,ko05219,ko05220,ko05221,ko05223,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map01524,map04010,map04011,map04012,map04013,map04014,map04015,map04016,map04022,map04024,map04062,map04066,map04068,map04071,map04072,map04075,map04114,map04140,map04150,map04151,map04210,map04214,map04218,map04261,map04270,map04320,map04350,map04360,map04370,map04371,map04380,map04510,map04520,map04540,map04550,map04611,map04620,map04621,map04650,map04657,map04658,map04659,map04660,map04662,map04664,map04666,map04668,map04713,map04720,map04722,map04723,map04724,map04725,map04726,map04730,map04810,map04910,map04912,map04914,map04915,map04916,map04917,map04919,map04921,map04926,map04930,map04933,map04934,map04960,map05010,map05020,map05034,map05131,map05132,map05133,map05140,map05142,map05145,map05152,map05160,map05161,map05164,map05165,map05167,map05200,map05203,map05205,map05210,map05211,map05212,map05213,map05214,map05215,map05216,map05218,map05219,map05220,map05221,map05223,map05224,map05225,map05226,map05230,map05231
KEGG ModuleM00687
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000165,GO:0000749,GO:0000750,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004707,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007186,GO:0008150,GO:0008152,GO:0009272,GO:0009653,GO:0009987,GO:0010033,GO:0010468,GO:0010927,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019236,GO:0019538,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022603,GO:0022607,GO:0023014,GO:0023052,GO:0030154,GO:0030435,GO:0030437,GO:0030476,GO:0031136,GO:0031137,GO:0031139,GO:0031505,GO:0032005,GO:0032502,GO:0032505,GO:0032989,GO:0034293,GO:0035556,GO:0036211,GO:0042173,GO:0042174,GO:0042221,GO:0042244,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043900,GO:0043902,GO:0043934,GO:0043935,GO:0043937,GO:0043939,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045229,GO:0045595,GO:0045596,GO:0046777,GO:0046999,GO:0048468,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051321,GO:0051704,GO:0051716,GO:0060255,GO:0065007,GO:0070590,GO:0070591,GO:0070726,GO:0070887,GO:0071310,GO:0071444,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071940,GO:0140096,GO:1901564,GO:1903046,GO:2000241,GO:2000243
EggNOG free text desc.MAP kinase activity
EggNOG OGsKOG0660@1,KOG0660@2759
EC2.7.11.24
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03036,ko04147
Exons5
Model size1881
Cds size1881
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12524.5107.1prot_M-pyrifera_M_contig12524.5107.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12524 3828..8001 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815768.376053-CDS-M-pyrifera_M_contig12524:3827..46621622815768.376053-CDS-M-pyrifera_M_contig12524:3827..4662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 3828..4662 -
1692277560.425807-CDS-M-pyrifera_M_contig12524:3827..46621692277560.425807-CDS-M-pyrifera_M_contig12524:3827..4662Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 3828..4662 -
1622815768.3901498-CDS-M-pyrifera_M_contig12524:4773..51111622815768.3901498-CDS-M-pyrifera_M_contig12524:4773..5111Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 4774..5111 -
1692277560.437277-CDS-M-pyrifera_M_contig12524:4773..51111692277560.437277-CDS-M-pyrifera_M_contig12524:4773..5111Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 4774..5111 -
1622815768.4085448-CDS-M-pyrifera_M_contig12524:5552..58621622815768.4085448-CDS-M-pyrifera_M_contig12524:5552..5862Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 5553..5862 -
1692277560.446048-CDS-M-pyrifera_M_contig12524:5552..58621692277560.446048-CDS-M-pyrifera_M_contig12524:5552..5862Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 5553..5862 -
1622815768.4224648-CDS-M-pyrifera_M_contig12524:6420..66821622815768.4224648-CDS-M-pyrifera_M_contig12524:6420..6682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 6421..6682 -
1692277560.4546177-CDS-M-pyrifera_M_contig12524:6420..66821692277560.4546177-CDS-M-pyrifera_M_contig12524:6420..6682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 6421..6682 -
1622815768.437-CDS-M-pyrifera_M_contig12524:7865..80011622815768.437-CDS-M-pyrifera_M_contig12524:7865..8001Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 7866..8001 -
1692277560.4644492-CDS-M-pyrifera_M_contig12524:7865..80011692277560.4644492-CDS-M-pyrifera_M_contig12524:7865..8001Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12524 7866..8001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12524.5107.1

>prot_M-pyrifera_M_contig12524.5107.1 ID=prot_M-pyrifera_M_contig12524.5107.1|Name=mRNA_M-pyrifera_M_contig12524.5107.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=627bp
QHVVTRWYRPPELMLSPNGFYGFSVDMWSVGCIFGELLGRRPLFPGSSFE
DQLSLIFDVIGAPTAEEVVHIRGAQARKFLEKLKGRAGVAFSDLLPGAPA
DAASLLRSLLLFDPIKRCTPTEGLRHVFFGDLRKEPAPVVDPPTGLRFEF
EQQGVPRSTLKKLIAMEVEHFQSGANLKVHSRRTAHAPELSGRAPVSAIT
RAAARSVAGFSSAGTGDAADRCYSDSTPQSSVDAGEKQEQQARNNRLPQF
GGFDGGKEDDDISHLDAASLQSSRLCPKEGSVDEEEEEAGTSSYEDAGRA
HVAVVATAGGYVDNDDGGDDYAAVPELPSPLSLSSLMSSSPSVSLSSSTG
RGAVDGNRWEKRSLGTTKGKEEVGEWETGTFKPTGRRVTLTLDGAWSPVH
TMGSALTDGAPNTSPPRGVRTASAEGDSSNWPPIALELEENACRSGAVVA
EGSPNAQFLHSPGTNLSDTSTSVQTFVSLQPVPAAPVTPTRRRSLAGFAR
GSESWEGEDRCKGSDARGNVVAGVRSPGALHELLLARNVCRDEVPTEIER
QNEDEREGWNRLDTADAFGDRGRRGLKESLPTAEAIVRASGALRRDRAER
AWQVVGVARARVKAEADAAAAATKAAE
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mRNA from alignment at M-pyrifera_M_contig12524:3828..8001-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12524.5107.1 ID=mRNA_M-pyrifera_M_contig12524.5107.1|Name=mRNA_M-pyrifera_M_contig12524.5107.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4174bp|location=Sequence derived from alignment at M-pyrifera_M_contig12524:3828..8001- (Macrocystis pyrifera P11B4 male)
CAGCACGTCGTGACCCGCTGGTATCGGCCGCCGGAGCTCATGCTGTCGCC
GAACGGGTTCTATGGGTTCTCGGTCGACATGTGGTCGGTCGGGTGCATCT
TCGGGGAGCTGCTCGGGCGACGCCCGCTCTTTCCTGGTGAGAGAAAGAGA
AAGGGGGAGAGAGGGGGAAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAG
GGGAAGATGAAACTCTTTTTTTTTTTCTCGTGCTACTCCTGCTGCTGTTC
GTAGAAGAATGGAAATTGAGTACGTACTCGCAAAGACGGGAAAGTGTTGA
CCGGCTGGTCGTCACGCGTGCTTTCCCGCTGGTGGTACCAGGTGTAAGCT
GGCCAGGCCAACTTTGCGATTGTTGTCGTGCTCCTCCTGTATTCGCCCCC
GTCCCGTCCCCTCCCCTTTCCTCCCCTCCCCTTCGCCCTCCCCCCCCCCC
ATCCCCCTCCCTCTTCGTACGCGCGGGTTGCACCGAGGCGCGAGAGGCAG
ACGAGCGTAGAGTTTTCTGATTTATTGTGTGGTTCGTTGTGCCGGGTGGA
GTGAGGCTCTCGTCCCATGTTCCCGTTCGTCGTCTCGACACTCGCCTCCT
GCGCCAGCCGATGCTGACGACGAACACGTGGGGGGGGGGGGCAGACCCGC
GCCCCCAAGTCGCTCTTTGCGGTCCCTGTGCACCATTGCCAGGCGCTATC
GTAGCGTGCCTCTGTTGCCGCTGTTGCTGCGGCCACGACTTTTCCTTGCC
TACATGCCCCGAATACGCCCTACTACTGAAGGCATAATACTAATGGCGTG
CGTTTGAACGGCGTGCAAAAAGTACGATCGCTGAGGATGCGCGTACCCCT
TCCCACCCCCCCCGCCACGCCCTGGATGCAAAAGTCTACGGTCATACAAC
TACGTCGATGCGTGATGTCGAGTCCCTTCTCCCCCCACCCCCGTTTCGTG
CGCCGTTCCGCGCACTGTAGCGATGGCATGGCTCTCATTCTGTTTCGCCG
CCTGGGCGGTGGCATCTGCTGCGTAGCACAGCACTGCACGGACGGGATCA
TACCTCGTAGTGCGCACGTAGCCCCCCCCCTTTCCCCTTCCCCCCCAACG
ATCCACGTCTTGCATGTGGTTGTTACATTTGGGTACTGATTTGTTTTGCC
GACACCAACCAACCACACTCCTCACCGCGTGACATACCCTCTCCCGTCAA
CTCACAAGCAACGCCTCCCCGCTCTGCGACCTTTCCACGATAATCGGCTT
TGCCACGCAATCGTGCTCCCCGGCCATGCCCCCGCGACTACGGCCCCGCG
ATGACGCATTCCGCGGCAGGCTCGAGCTTCGAGGACCAGCTCTCCCTCAT
CTTTGACGTGATCGGCGCGCCGACTGCCGAGGAGGTAGTTCACATCAGGG
GGGCGCAGGCGCGCAAGTTCTTGGAGAAGCTTAAGGGGAGGGCCGGGGTT
GCCTTCTCCGACCTCCTGCCCGGCGCCCCCGCCGACGCAGCGTCTCTGCT
GCGGAGCCTTCTGCTCTTCGACCCCATCAAGCGCTGCACGCCCACCGAGG
GTCTACGCCACGTGTTCTTTGGCGATCTCAGGTACTGATGTGCCGTGTTC
ACGTATACAGTATAGCGTGATGTGTATAAAACGATAGAACGGGAATTTGC
GCTATAGGAGAAGGGGACGAGTAGGGGGGGGGGGGTACCTGGTGGTGTTA
GCTTGTTTGTGTGTTTTAATATTGGTTTGCGTGATGCTAGGTGTACGCGT
TTTTGTCGGCGGCGCGATGTTTTTCCTCCAAGTTTAGTTTGCGTGCTTTT
CCTTTTCTTGGGGGAGGGTGAAGGGTCTACCGACGACTCACGAACGTAAC
GTAACGCAACGAGCCCGTTTCCTGTGCGACGTAGGCGTCGGCGCTGCCAG
GCTTCTTCGTCTACGTATATAGCTTCATGTGGAGCGGAGACTGGGTATCC
CGCTGTTCTCGCACCTCTGGCAACTCCCAAACCCAACCGAACCGCTAACC
CTGTGTGTTGTCGCATTCCCCGTCGCTTCTCGTGTCCTGTGCTGCACCAC
CTCCTCCCTCCCTCCCTCACTCCCTCCTTCCTTCCTTCCTTCCTTCTTCC
CTTCCCACCATATCCTTCAAACGCCCCCGTTGCTTCCAGGAAAGAACCAG
CGCCAGTTGTAGATCCGCCGACCGGCCTGCGGTTCGAGTTCGAGCAGCAG
GGGGTGCCACGGTCGACCCTTAAAAAACTTATTGCGATGGAAGTCGAGCA
CTTCCAGTCCGGCGCCAACCTCAAGGTGCACTCGAGGCGCACGGCTCACG
CCCCCGAGTTATCGGGCCGTGCCCCGGTCTCGGCCATCACGCGTGCTGCC
GCTAGGTCCGTGGCGGGGTTTTCGTCGGCGGGGACGGGGGACGCCGCCGA
CAGGTGTTATAGCGACAGTACCCCTCAGAGTAGCGTCGACGCGGGCGAGG
TGAGAAAGCCGCCAGAGCCTCCAGCGCAGGAGCAACTACAGCAACTGCAG
CAAGTACAACAGCAGCAGGAGGAAGAGGAAAAGCTGCGGCAACAGGAAGA
AGAGAAGCGCAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAAGTGGC
AGAAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAAGTGGCAGAAGCAGCAG
CAGCAGCAGCAGCAGCAGGAGAAGTGGCAGAAGCAGCAGCAGCAGCAGCA
GGAGAAGTGGCAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGAAGCTGCAACAGAAGCAACAGCATAAGCAG
CAGCAAAAGCAACAGCATGGACAACTGCAACAGCAGCAGCAGCAGCAGCA
GCAAAAGAAGCAGCTGCTGCTTCTTCAGCAGGAGCGGGAGAAGCAAGAGC
AGCAAGCGCGCAACAACAGGCTCCCTCAGTTCGGCGGCTTTGACGGCGGG
AAGGAGGATGACGACATCTCCCACTTGGACGCCGCGAGCCTGCAATCGTC
GAGACTGTGCCCGAAAGAAGGCAGTGTAGACGAAGAAGAGGAGGAGGCAG
GCACAAGCAGTTACGAAGATGCCGGTCGCGCTCATGTGGCGGTAGTTGCC
ACGGCTGGCGGTTACGTCGACAACGACGACGGTGGTGACGATTACGCGGC
GGTGCCGGAGTTACCGTCACCGCTGTCGCTGTCGTCGTTAATGTCGTCCT
CGCCGTCGGTATCGTTGTCCTCGTCCACGTTATCGTTGTTGTCTCCGGTG
AAGGAAGAACTCGAACGCAACCAGGAGCTCGAGGAGGAAGAGGCGGAGGT
GCGACGAGCAGAAAGGGAAGAAAAAGCGGCGTCGGCGAGGGGGCGCGGGG
CTGTCGATGGAAACCGGTGGGAAAAGAGAAGCCTTGGCACGACGAAAGGG
AAAGAGGAGGTCGGGGAGTGGGAGACGGGGACGTTCAAGCCGACGGGGAG
AAGGGTCACGCTGACGTTAGACGGGGCGTGGTCGCCAGTGCACACCATGG
GCAGCGCTCTAACCGACGGCGCTCCAAACACTTCTCCGCCGCGGGGGGTG
AGAACGGCAAGCGCGGAGGGCGACAGCTCCAACTGGCCGCCGATCGCCCT
CGAGCTGGAGGAGAACGCTTGCCGCAGCGGGGCGGTGGTGGCAGAAGGCT
CTCCAAACGCTCAGTTCCTACACAGTCCCGGGACAAACCTGAGCGACACG
TCCACGTCCGTGCAGACGTTTGTGTCTCTGCAGCCGGTGCCCGCGGCGCC
CGTGACGCCGACTAGGCGAAGATCGTTGGCCGGCTTCGCGCGCGGGAGTG
AGAGTTGGGAGGGCGAGGACCGCTGCAAGGGGTCGGACGCGAGAGGTAAC
GTGGTCGCGGGCGTTCGGTCTCCCGGGGCCCTTCACGAGTTGCTACTCGC
CCGAAACGTCTGTCGCGATGAGGTACCCACCGAGATCGAGAGGCAGAACG
AAGACGAGAGGGAAGGCTGGAATAGGTTGGATACGGCCGATGCTTTCGGC
GACCGAGGGAGAAGGGGGCTCAAGGAATCACTACCCACGGCCGAAGCCAT
CGTCCGCGCGTCGGGGGCTCTTCGACGCGACAGAGCGGAGCGAGCGTGGC
AAGTCGTCGGCGTCGCGAGGGCCAGAGTAAAAGCGGAGGCAGATGCGGCG
GCGGCAGCGACCAAGGCAGCCGAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12524:3828..8001-

>mRNA_M-pyrifera_M_contig12524.5107.1 ID=mRNA_M-pyrifera_M_contig12524.5107.1|Name=mRNA_M-pyrifera_M_contig12524.5107.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3762bp|location=Sequence derived from alignment at M-pyrifera_M_contig12524:3828..8001- (Macrocystis pyrifera P11B4 male)
CAGCACGTCGTGACCCGCTGGTATCGGCCGCCGGAGCTCATGCTGTCGCC
GAACGGGTTCTATGGGTTCTCGGTCGACATGTGGTCGGTCGGGTGCATCT
TCGGGGAGCTGCTCGGGCGACGCCCGCTCTTTCCTGCAGCACGTCGTGAC
CCGCTGGTATCGGCCGCCGGAGCTCATGCTGTCGCCGAACGGGTTCTATG
GGTTCTCGGTCGACATGTGGTCGGTCGGGTGCATCTTCGGGGAGCTGCTC
GGGCGACGCCCGCTCTTTCCTGGCTCGAGCTTCGAGGACCAGCTCTCCCT
CATCTTTGACGTGATCGGCGCGCCGACTGCCGAGGAGGTAGTTCACATCA
GGGGGGCGCAGGCGCGCAAGTTCTTGGAGAAGCTTAAGGGGAGGGCCGGG
GTTGCCTTCTCCGACCTCCTGCCCGGCGCCCCCGCCGACGCAGCGTCTCT
GCTGCGGAGCCTTCTGCTCTTCGACCCCATCAAGCGCTGCACGCCCACCG
AGGGTCTACGCCACGTGTTCTTTGGCGATCTCAGGCTCGAGCTTCGAGGA
CCAGCTCTCCCTCATCTTTGACGTGATCGGCGCGCCGACTGCCGAGGAGG
TAGTTCACATCAGGGGGGCGCAGGCGCGCAAGTTCTTGGAGAAGCTTAAG
GGGAGGGCCGGGGTTGCCTTCTCCGACCTCCTGCCCGGCGCCCCCGCCGA
CGCAGCGTCTCTGCTGCGGAGCCTTCTGCTCTTCGACCCCATCAAGCGCT
GCACGCCCACCGAGGGTCTACGCCACGTGTTCTTTGGCGATCTCAGGAAA
GAACCAGCGCCAGTTGTAGATCCGCCGACCGGCCTGCGGTTCGAGTTCGA
GCAGCAGGGGGTGCCACGGTCGACCCTTAAAAAACTTATTGCGATGGAAG
TCGAGCACTTCCAGTCCGGCGCCAACCTCAAGGTGCACTCGAGGCGCACG
GCTCACGCCCCCGAGTTATCGGGCCGTGCCCCGGTCTCGGCCATCACGCG
TGCTGCCGCTAGGTCCGTGGCGGGGTTTTCGTCGGCGGGGACGGGGGACG
CCGCCGACAGGTGTTATAGCGACAGTACCCCTCAGAGTAGCGTCGACGCG
GGCGAGGAAAGAACCAGCGCCAGTTGTAGATCCGCCGACCGGCCTGCGGT
TCGAGTTCGAGCAGCAGGGGGTGCCACGGTCGACCCTTAAAAAACTTATT
GCGATGGAAGTCGAGCACTTCCAGTCCGGCGCCAACCTCAAGGTGCACTC
GAGGCGCACGGCTCACGCCCCCGAGTTATCGGGCCGTGCCCCGGTCTCGG
CCATCACGCGTGCTGCCGCTAGGTCCGTGGCGGGGTTTTCGTCGGCGGGG
ACGGGGGACGCCGCCGACAGGTGTTATAGCGACAGTACCCCTCAGAGTAG
CGTCGACGCGGGCGAGAAGCAAGAGCAGCAAGCGCGCAACAACAGGCTCC
CTCAGTTCGGCGGCTTTGACGGCGGGAAGGAGGATGACGACATCTCCCAC
TTGGACGCCGCGAGCCTGCAATCGTCGAGACTGTGCCCGAAAGAAGGCAG
TGTAGACGAAGAAGAGGAGGAGGCAGGCACAAGCAGTTACGAAGATGCCG
GTCGCGCTCATGTGGCGGTAGTTGCCACGGCTGGCGGTTACGTCGACAAC
GACGACGGTGGTGACGATTACGCGGCGGTGCCGGAGTTACCGTCACCGCT
GTCGCTGTCGTCGTTAATGTCGTCCTCGCCGTCGGTATCGTTGTCCTCGT
CCACAAGCAAGAGCAGCAAGCGCGCAACAACAGGCTCCCTCAGTTCGGCG
GCTTTGACGGCGGGAAGGAGGATGACGACATCTCCCACTTGGACGCCGCG
AGCCTGCAATCGTCGAGACTGTGCCCGAAAGAAGGCAGTGTAGACGAAGA
AGAGGAGGAGGCAGGCACAAGCAGTTACGAAGATGCCGGTCGCGCTCATG
TGGCGGTAGTTGCCACGGCTGGCGGTTACGTCGACAACGACGACGGTGGT
GACGATTACGCGGCGGTGCCGGAGTTACCGTCACCGCTGTCGCTGTCGTC
GTTAATGTCGTCCTCGCCGTCGGTATCGTTGTCCTCGTCCACGGGGCGCG
GGGCTGTCGATGGAAACCGGTGGGAAAAGAGAAGCCTTGGCACGACGAAA
GGGAAAGAGGAGGTCGGGGAGTGGGAGACGGGGACGTTCAAGCCGACGGG
GAGAAGGGTCACGCTGACGTTAGACGGGGCGTGGTCGCCAGTGCACACCA
TGGGCAGCGCTCTAACCGACGGCGCTCCAAACACTTCTCCGCCGCGGGGG
GTGAGAACGGCAAGCGCGGAGGGCGACAGCTCCAACTGGCCGCCGATCGC
CCTCGAGCTGGAGGAGAACGCTTGCCGCAGCGGGGCGGTGGTGGCAGAAG
GCTCTCCAAACGCTCAGTTCCTACACAGTCCCGGGACAAACCTGAGCGAC
ACGTCCACGTCCGTGCAGACGTTTGTGTCTCTGCAGCCGGTGCCCGCGGC
GCCCGTGACGCCGACTAGGCGAAGATCGTTGGCCGGCTTCGCGCGCGGGA
GTGAGAGTTGGGAGGGCGAGGACCGCTGCAAGGGGTCGGACGCGAGAGGT
AACGTGGTCGCGGGCGTTCGGTCTCCCGGGGCCCTTCACGAGTTGCTACT
CGCCCGAAACGTCTGTCGCGATGAGGTACCCACCGAGATCGAGAGGCAGA
ACGAAGACGAGAGGGAAGGCTGGAATAGGTTGGATACGGCCGATGCTTTC
GGCGACCGAGGGAGAAGGGGGCTCAAGGAATCACTACCCACGGCCGAAGC
CATCGTCCGCGCGTCGGGGGCTCTTCGACGCGACAGAGCGGAGCGAGCGT
GGCAAGTCGTCGGCGTCGCGAGGGCCAGAGTAAAAGCGGAGGCAGATGCG
GCGGCGGCAGCGACCAAGGCAGCCGAAGGGGCGCGGGGCTGTCGATGGAA
ACCGGTGGGAAAAGAGAAGCCTTGGCACGACGAAAGGGAAAGAGGAGGTC
GGGGAGTGGGAGACGGGGACGTTCAAGCCGACGGGGAGAAGGGTCACGCT
GACGTTAGACGGGGCGTGGTCGCCAGTGCACACCATGGGCAGCGCTCTAA
CCGACGGCGCTCCAAACACTTCTCCGCCGCGGGGGGTGAGAACGGCAAGC
GCGGAGGGCGACAGCTCCAACTGGCCGCCGATCGCCCTCGAGCTGGAGGA
GAACGCTTGCCGCAGCGGGGCGGTGGTGGCAGAAGGCTCTCCAAACGCTC
AGTTCCTACACAGTCCCGGGACAAACCTGAGCGACACGTCCACGTCCGTG
CAGACGTTTGTGTCTCTGCAGCCGGTGCCCGCGGCGCCCGTGACGCCGAC
TAGGCGAAGATCGTTGGCCGGCTTCGCGCGCGGGAGTGAGAGTTGGGAGG
GCGAGGACCGCTGCAAGGGGTCGGACGCGAGAGGTAACGTGGTCGCGGGC
GTTCGGTCTCCCGGGGCCCTTCACGAGTTGCTACTCGCCCGAAACGTCTG
TCGCGATGAGGTACCCACCGAGATCGAGAGGCAGAACGAAGACGAGAGGG
AAGGCTGGAATAGGTTGGATACGGCCGATGCTTTCGGCGACCGAGGGAGA
AGGGGGCTCAAGGAATCACTACCCACGGCCGAAGCCATCGTCCGCGCGTC
GGGGGCTCTTCGACGCGACAGAGCGGAGCGAGCGTGGCAAGTCGTCGGCG
TCGCGAGGGCCAGAGTAAAAGCGGAGGCAGATGCGGCGGCGGCAGCGACC
AAGGCAGCCGAA
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