prot_M-pyrifera_M_contig125239.5106.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125239.5106.1
Unique Nameprot_M-pyrifera_M_contig125239.5106.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
BLAST of mRNA_M-pyrifera_M_contig125239.5106.1 vs. uniprot
Match: A0A6N9BJB8_9PROT (RidA family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N9BJB8_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 2.040e-12
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    1 MADNDISLSSLMSATLFVTAFHRFPELNAVWDEFFANCENLPTRTAVGATQLPIGAQVEAEFMFY 65
            + D  + L  +MSAT++ TAF RFP +NA W+  F+     P RTAVG   LP+GA VE  F FY
Sbjct:   66 LPDIGLRLEDMMSATIYTTAFERFPAINAAWEAVFSEGVRPPARTAVGVQALPLGATVEIAFEFY 130          
BLAST of mRNA_M-pyrifera_M_contig125239.5106.1 vs. uniprot
Match: A0A0P6R8N8_9RHOB (Uncharacterized protein n=2 Tax=Phaeobacter sp. 11ANDIMAR09 TaxID=1225647 RepID=A0A0P6R8N8_9RHOB)

HSP 1 Score: 57.8 bits (138), Expect = 1.180e-8
Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    1 MADNDISLSSLMSATLFVTAFHRFPELNAVWDEFFANCE--NLPTRTAVGATQLPIGAQVEAEFMFY 65
            M +  ++   ++ A +++  F  F   NAVWD+FF      NLP RT VG + LP+GA +EAEF F+
Sbjct:   67 MDEIGLNNEDMVEARVYLADFSSFHNFNAVWDDFFQETSRGNLPARTTVGVSALPLGAAIEAEFSFF 133          
BLAST of mRNA_M-pyrifera_M_contig125239.5106.1 vs. uniprot
Match: A0A285NMK9_9AQUI (2-iminobutanoate/2-iminopropanoate deaminase n=1 Tax=Hydrogenobacter hydrogenophilus TaxID=35835 RepID=A0A285NMK9_9AQUI)

HSP 1 Score: 49.7 bits (117), Expect = 1.020e-5
Identity = 20/54 (37.04%), Postives = 35/54 (64.81%), Query Frame = 0
Query:   10 SLMSATLFVTAFHRFPELNAVWDEFFANCENLPTRTAVGATQLPIGAQVEAEFM 63
            ++   ++++T    FP+LNA++++FF + E  P RT VG   LP+GA VE + +
Sbjct:   69 NIAKVSIYITDLSLFPQLNALYEDFFKDVEVKPARTTVGVNSLPMGAYVEMDII 122          
BLAST of mRNA_M-pyrifera_M_contig125239.5106.1 vs. uniprot
Match: A0A843CQU4_9ARCH (RidA family protein n=1 Tax=Candidatus Methanomethylophilaceae archaeon TaxID=2517205 RepID=A0A843CQU4_9ARCH)

HSP 1 Score: 48.9 bits (115), Expect = 1.810e-5
Identity = 22/55 (40.00%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    7 SLSSLMSATLFVTAFHRFPELNAVWDEFFANCENLPTRTAVGATQLPIGAQVEAE 61
            S+S ++  T+++T    FPE+NAV+ EFF+  E  P R+ +GA+ LP G ++E +
Sbjct:   66 SMSDVLKVTVYITDMAAFPEVNAVYGEFFS--EPYPARSCIGASALPKGVKIEID 118          
BLAST of mRNA_M-pyrifera_M_contig125239.5106.1 vs. uniprot
Match: A0A6H9K067_9BACT (RidA family protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A6H9K067_9BACT)

HSP 1 Score: 48.1 bits (113), Expect = 3.780e-5
Identity = 24/60 (40.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    7 SLSSLMSATLFVTAFHRFPELNAVWDEFFANCENLPTRTAVGATQLPIGAQVEAEFMFYV 66
            SL++++  T+F+T    F ++N V+ +FF   +NLP R+AV  + LP+GA+VE E +  V
Sbjct:   69 SLANVVKTTVFMTDLGEFAQMNEVYGQFFK--DNLPARSAVQVSALPLGARVEIEAVALV 126          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125239.5106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6N9BJB8_9PROT2.040e-1247.69RidA family protein n=1 Tax=Alphaproteobacteria ba... [more]
A0A0P6R8N8_9RHOB1.180e-840.30Uncharacterized protein n=2 Tax=Phaeobacter sp. 11... [more]
A0A285NMK9_9AQUI1.020e-537.042-iminobutanoate/2-iminopropanoate deaminase n=1 T... [more]
A0A843CQU4_9ARCH1.810e-540.00RidA family protein n=1 Tax=Candidatus Methanometh... [more]
A0A6H9K067_9BACT3.780e-540.00RidA family protein n=1 Tax=Calditrichaeota bacter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 1..68
e-value: 1.5E-12
score: 49.4
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 3..68
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 4..63
e-value: 1.5E-10
score: 41.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125239contigM-pyrifera_M_contig125239:279..506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125239.5106.1mRNA_M-pyrifera_M_contig125239.5106.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125239 279..515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125239.5106.1 ID=prot_M-pyrifera_M_contig125239.5106.1|Name=mRNA_M-pyrifera_M_contig125239.5106.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
MADNDISLSSLMSATLFVTAFHRFPELNAVWDEFFANCENLPTRTAVGAT
QLPIGAQVEAEFMFYVPSTAPRESA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf
IPR006175YjgF/YER057c/UK114