mRNA_M-pyrifera_M_contig100220.51.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A2R5GPK3_9STRA (TBC1 domain family member 22B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GPK3_9STRA) HSP 1 Score: 237 bits (605), Expect = 4.770e-74 Identity = 119/228 (52.19%), Postives = 156/228 (68.42%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDLTQ-------SVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAE 663 +RG VW+LLLGY+P +ERR L RKRQEY + Y+ + E RS+ +Q MLRQIL D+ RT G+PL C+ V+R+LER+LYIWA+RHPA+GYVQG+ND+ PF F L + S+ D + LR VEAD +WCL+++LD +QD YT+ QPGL R +RLQ +I R+D+PL DHL++ V QFA RW+NCLLVREL L VRLWD+Y+AE Sbjct: 68 VRGPVWQLLLGYLPTKRERRDATLRRKRQEYFDCLPMYYNNADAE--RSEEDQKMLRQILLDIPRTNPGMPLFHCDEVRRSLERMLYIWAIRHPASGYVQGMNDLVTPFYVVFLADHLSDGEIKTINAYDASIVDSDILRAVEADSYWCLTKLLDGIQDHYTMLQPGLQRMFYRLQGIIQRIDQPLHDHLQNEHVDFNQFAFRWMNCLLVRELELNSIVRLWDTYLAE 293
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A444Y8J4_ARAHY (Rab-GAP TBC domain-containing protein n=4 Tax=Arachis TaxID=3817 RepID=A0A444Y8J4_ARAHY) HSP 1 Score: 225 bits (574), Expect = 2.360e-68 Identity = 113/227 (49.78%), Postives = 155/227 (68.28%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVD-LTQSVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 +R VWRLLLGY P + +RR VL RKR EY V +Y+ + E VRSD E +MLRQI D RT VP + + VQ++LER+LY WA+RHPA+GYVQG+ND+ PFL F L G+D + S E + +EAD +WCLS++LD +QD YT QPG+ R V +L++++ R+D+P+++H+E G+ +QFA RW NCLL+RE+P L RLWD+Y+AEG A Sbjct: 160 MRPTVWRLLLGYAPPNSDRRDGVLRRKRLEYLDCVSQYY--DIPETVRSDDEINMLRQIAVDCPRTVPDVPFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLQGGIDNWSMSDLSAEKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSNHMELQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDA 384
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A7S0D3Z1_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D3Z1_9EUKA) HSP 1 Score: 226 bits (575), Expect = 2.830e-68 Identity = 107/224 (47.77%), Postives = 156/224 (69.64%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDLTQSVED---GEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAE 663 +R DVW+L+LGY P ++ERR + ++R+EY H R + +E S E+ ++ QI D RT G+ L++ +++Q+ LER+LYIW+VRHPA+GYVQG+ND+ +PFL F + GV+LT+ E E L+ VEAD FWC+S ++D +QD YT QPG+ R V +LQ++I RLD+PL DHL+ VR F+ RW+NC+LVREL +PL VR+WD+Y+A+ Sbjct: 181 VRSDVWQLILGYQPTNRERRGPTVAKRRKEYQDHCRNIYFEDESRY--SSSERKIMHQIRLDTPRTLPGLTLLQHKSIQKLLERILYIWSVRHPASGYVQGINDLVIPFLMVFLAARNGVELTELEEKHVTAEHLKIVEADCFWCMSNLIDGIQDNYTSSQPGIQRMVFKLQELIHRLDQPLHDHLKSHEVRFFDFSYRWMNCVLVRELSMPLIVRVWDTYIAQ 402
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A7C9DN70_OPUST (Rab-GAP TBC domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DN70_OPUST) HSP 1 Score: 219 bits (559), Expect = 7.510e-68 Identity = 111/227 (48.90%), Postives = 153/227 (67.40%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVDLTQSVE-DGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 +R +VWRLLLGY P + +RR VL RKR EY V +Y+ + E R+D E SMLRQI D RT V + VQ++LER+LY WA+RHPA+GYVQG+ND+ PFL F L +D +++ + + +EAD +WCLS+MLDS+QD YT QPG+ R V +L++++ R+D+P++ HLE G+ +QFA RW NCLL+RE+P L RLWD+Y+AEG A Sbjct: 14 MRPNVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVAQYYDIPDTE--RTDDEISMLRQIAVDCPRTVPDVTFFQQAVVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLQGSIDNWSALDLSKDTIANIEADCYWCLSKMLDSMQDHYTFAQPGIQRLVFKLKELVQRIDEPVSRHLEEQGLDFLQFAFRWFNCLLIREIPFNLVARLWDTYLAEGDA 238
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: S8CEZ3_9LAMI (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CEZ3_9LAMI) HSP 1 Score: 224 bits (571), Expect = 7.710e-68 Identity = 115/230 (50.00%), Postives = 154/230 (66.96%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVD------LTQSVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEG 666 +R VWRLLLGY P + +RR VL RKRQEY V Y+ + ++ R+D E +MLRQI D RT V + VQ++LER+LYIWA+RHPA+GYVQG+ND+A PFL F L G+D LTQ E + +VEAD +WCLS++LD +QD YT QPG+ R V +L++++ R+D PL+ H+E G+ +QFA RW NCLL+RE+P L RLWD+Y+AEG Sbjct: 166 MRPTVWRLLLGYAPCNSDRREAVLRRKRQEYLDCVAHYY--DIPDIGRTDEEINMLRQIAVDCPRTVPDVSFFQQAQVQKSLERVLYIWAIRHPASGYVQGINDLATPFLVVFLSEHLEGGIDSWRMSDLTQ-----ERISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLRELVRRIDDPLSKHMEEQGLEFLQFAFRWFNCLLIREIPFRLVARLWDTYLAEG 388
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A5N6Q0S6_9ASTR (Rab-GAP TBC domain-containing protein n=6 Tax=Asteraceae TaxID=4210 RepID=A0A5N6Q0S6_9ASTR) HSP 1 Score: 223 bits (569), Expect = 1.460e-67 Identity = 112/227 (49.34%), Postives = 154/227 (67.84%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVDLTQSVE-DGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 LR +VWRLLLGY P + +RR VL RKR EY V +Y+ + E R+D E +MLRQI D RT V + AVQ++LER+LY WA+RHPA+GYVQG+ND+A PFL F L +D + D E + +VEAD +WCLS++LD +QD YT QPG+ R V +L++++ R+D+P+A H++ G+ +QFA RW NCLL+RE+P L RLWD+Y++EG A Sbjct: 164 LRPNVWRLLLGYAPPNSDRREGVLRRKRSEYFDCVAQYYDISDNE--RTDEEINMLRQIAVDCPRTVPDVTFFQQAAVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEHLEGSIDNWSIADLDAEKISDVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVAKHIDEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLSEGDA 388
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A068V4L3_COFCA (Rab-GAP TBC domain-containing protein n=5 Tax=Coffea TaxID=13442 RepID=A0A068V4L3_COFCA) HSP 1 Score: 223 bits (569), Expect = 1.650e-67 Identity = 115/231 (49.78%), Postives = 156/231 (67.53%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDLTQSVEDG-------EGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 LR VWRLLLGY P + +RR VL RKR EY V +Y+ ++ E R+D E +MLRQI D RT V + VQ++LER+LYIWA+RHPA+GYVQG+ND+A PFL F L L SVE+ + + VEAD +WCLS++LD +QD YT QPG+ R V +L++++ R+D+P++ H+E+ G+ +QFA RWVNCLL+RE+P L RLWD+Y+AEG A Sbjct: 169 LRPSVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVAQYYDVQDTE--RTDEEINMLRQIAVDCPRTVPDVSFFQQPEVQKSLERILYIWAIRHPASGYVQGINDLATPFLVVF----LSEHLEGSVENWSMADLSPDQISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSTHMENQGLEFLQFAFRWVNCLLIREIPFHLVTRLWDTYLAEGDA 393
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A6I9QIA0_ELAGV (TBC1 domain family member 22B isoform X2 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QIA0_ELAGV) HSP 1 Score: 223 bits (567), Expect = 2.830e-67 Identity = 113/227 (49.78%), Postives = 152/227 (66.96%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDL--GVDLTQSVE-DGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 +R DVWRLLLGY P +RR VL RKR EY V +Y+ + E RSD E SMLRQI D RT VP + E +Q++LER+LY WA+RHPA+GYVQG+ND+ PFL F L G++ E + + EVEAD +WCLS++LD +QD YT QPG+ R V +L++++ R+D+P++ +E G+ +QFA RW NCLL+RE+P L RLWD+Y+AEG A Sbjct: 163 MRPDVWRLLLGYAPPSSDRREGVLTRKRLEYVDCVSQYYDIPDTE--RSDDEISMLRQIAVDCPRTVPDVPFFQHEQIQKSLERILYTWAIRHPASGYVQGINDLVTPFLIVFLSEHLDGGMESWSISELSPQKISEVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRRMEEQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDA 387
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A4D9BF88_SALSN (Rab-GAP TBC domain-containing protein n=8 Tax=Salvia TaxID=21880 RepID=A0A4D9BF88_SALSN) HSP 1 Score: 223 bits (567), Expect = 2.980e-67 Identity = 113/227 (49.78%), Postives = 154/227 (67.84%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDL-TQSVED--GEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 LR VWRLLLGY P++ +RR VL RKR EY HV +Y+ E + +R+D E MLRQI D RT + + VQ++LER+LY WA+RHPA+GYVQG+ND+A PFL F L + T S+ D E + VEAD +WCLS++LD +QD YT QPG+ R V +L++++ R+D+P++ H+E G+ +QFA RW NCLL+RE+P L RLWD+Y+AEG A Sbjct: 165 LRPTVWRLLLGYAPSNSDRREGVLRRKRTEYLDHVEQYY--EIPDTLRTDEEIGMLRQIAVDCPRTVPDLSFFQQAEVQKSLERILYTWAIRHPASGYVQGINDLATPFLVVFLSEYLEGSIDTWSMADLSREKILNVEADSYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSKHIEEQGLEFLQFAFRWFNCLLIREIPFGLVSRLWDTYLAEGDA 389
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Match: A0A7C8YZN1_OPUST (Rab-GAP TBC domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YZN1_OPUST) HSP 1 Score: 223 bits (567), Expect = 2.980e-67 Identity = 111/227 (48.90%), Postives = 151/227 (66.52%), Query Frame = 1 Query: 1 LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDGEQSMLRQILKDVNRTGDGVPLVRCEAVQRALERLLYIWAVRHPAAGYVQGLNDVALPFLAAFCFSDLGVDL---TQSVEDGEGLREVEADVFWCLSRMLDSVQDWYTVGQPGLHRQVHRLQDVITRLDKPLADHLEHIGVRPIQFAARWVNCLLVRELPLPLAVRLWDSYVAEGAA 672 +R +VWRLLLGY P + +RR VL RKR EY +V +Y+ E E RSD E +MLRQI D RT V + AVQ++LER+LY WA+RHPA+GYVQG+ND+ PFL F L + + S E + VEAD +WCLS++LD +QD YT QPG+ R V + ++++ R+D+P++ H+E G+ +QFA RW NCLL+RE+P L RLWD+Y+AEG A Sbjct: 165 MRPNVWRLLLGYAPPNSDRREGVLRRKRLEYLDYVAQYYDVPETE--RSDDEANMLRQIAVDCPRTVPDVTFFQQAAVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLEGSIDSWSASNLSKEKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKFKELVRRIDEPVSTHMEEQGLEYLQFAFRWFNCLLIREIPFNLVTRLWDTYLAEGDA 389 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100220.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100220.51.1 >prot_M-pyrifera_M_contig100220.51.1 ID=prot_M-pyrifera_M_contig100220.51.1|Name=mRNA_M-pyrifera_M_contig100220.51.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp LRGDVWRLLLGYMPAHKERRRVVLCRKRQEYHAHVRRYFGGEELEVVRSDback to top mRNA from alignment at M-pyrifera_M_contig100220:10..681- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100220.51.1 ID=mRNA_M-pyrifera_M_contig100220.51.1|Name=mRNA_M-pyrifera_M_contig100220.51.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig100220:10..681- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100220:10..681- >mRNA_M-pyrifera_M_contig100220.51.1 ID=mRNA_M-pyrifera_M_contig100220.51.1|Name=mRNA_M-pyrifera_M_contig100220.51.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig100220:10..681- (Macrocystis pyrifera P11B4 male)back to top |