prot_M-pyrifera_M_contig12520.5097.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12520.5097.1
Unique Nameprot_M-pyrifera_M_contig12520.5097.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length468
Homology
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI)

HSP 1 Score: 393 bits (1010), Expect = 4.930e-124
Identity = 290/548 (52.92%), Postives = 328/548 (59.85%), Query Frame = 0
Query:    1 MQIMRTAEEQFRQANDPSGATDGG-----PAFGGGGXAGVAGGVDGSFASPPAAEGARPRRRGS---------------MMAPTILMRESSTLFRRASVSFCRRLGEADGSFADSDLMAFE-------FSDWGRRGRASRSQNSE--RINRSGSG---GDRVPQRSSRSFHVLQDFLPRASSAVASGGQRFTAAVTGTSSRDSHGRFAMSAERQRAGEEKEPSPRQRGGQGAGSKSSPEDERHDRCLLQGDSGTHSVTDSYDLNSFGSYVDSDEENHEVGLSIDGDXXXXXXXXXXXXXXXXSIGGNSFH---PAPTPSP-EILLAFGSAHGAAAFSLHGSSASGHGAS--------------------GLGVSRHRWSAGRDPSRRGGGGXXXXXXXXXXXXXGLPRRVSWPGGMSTSDVGLEGAGRGGDEEGVP-----DMEAGLGG-GLGGSIEVGP----------DARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI------GGIVTV--ASGGSLA 468
            ++ MRTAEEQFRQANDP+G   GG      AFGG        GV GS    P   GA                      +MAPTILMRESS LFRRAS SFCRRLGEADGS  + D+ AFE        +DWGRRG   RS++S+   I+  G     G+RVPQRSSRSFHVLQD  P A  AV  GGQRFTAAVTG+SSR+ H RF++S+ RQ AG EKE SPR RG  GA SK +PED+RHD+CLL GDSGTHSVTDSYDLNSFGS+VDSDE++HEVGLSIDGD        XXXXX   +I G+SFH   PA T  P EILL FGSAHGAAAFSLHG S SGHG                       L  SRHRWSA R  S R G G             G+PRR+SWPG +S + VG       GDE  V      D EAG GG   GGS   GP            R  STC+ICCER ADAV+MECGHGG+C TCA  LA++PP  CPVCRK I+EV  +      G +V V  ASGG +A
Sbjct:  327 VRTMRTAEEQFRQANDPNGG--GGMDASSTAFGGVDDVEAGRGVRGS----PPIGGAEXXXXXXXXXXXXXXXXXXXXXVMAPTILMRESSMLFRRASASFCRRLGEADGSLMNPDVTAFEVRFRAVELADWGRRGGRFRSRDSDIAAIDDGGGSEERGERVPQRSSRSFHVLQDCFPHARGAVRRGGQRFTAAVTGSSSREGHERFSVSSGRQLAGAEKEGSPRPRGEDGATSKRTPEDDRHDQCLLPGDSGTHSVTDSYDLNSFGSFVDSDEDSHEVGLSIDGDEEDEPRDGXXXXX---AIDGSSFHESLPATTTEPPEILLGFGSAHGAAAFSLHGGSGSGHGLCHGSXXXXXXXXXXXXXXXXXXLATSRHRWSAERGTSSRRGAGSSIHGGAG-----GMPRRLSWPGELSLASVG-------GDEVDVAAVTASDAEAGRGGVATGGSS--GPLXXXXXXXXXXXREHSTCYICCERRADAVMMECGHGGVCFTCATTLADSPPHLCPVCRKVIQEVFKLHEIREFGRVVVVPPASGGEVA 851          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S0I1C8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I1C8_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 2.190e-9
Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 0
Query:  399 DARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIG-----GIVTV 461
            D     TC+ICC    DAV+MECGHGG+C  CA   A   P  CP+CR  I  V+ +G     GIV V
Sbjct:   39 DDGEEPTCWICCSGPCDAVLMECGHGGICMDCATQCAKKRPPLCPLCRARILVVVKVGAPDEAGIVQV 106          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S2XWW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWW7_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.840e-8
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0
Query:  401 RRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIGGIVTVASG 464
            R  ++C +C    ++AV++ECGH G+C  CA+ LA   P QCP+CR+ I ++L I   +   SG
Sbjct:   28 RGETSCLVCWNARSNAVLLECGHSGLCFPCAQALAQRYPQQCPMCRQNIVQILRIEPEIAGTSG 91          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S3AG72_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG72_9EUKA)

HSP 1 Score: 65.5 bits (158), Expect = 4.820e-8
Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 0
Query:  394 IEVGPDARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIGGIVTV 461
            I+   DA   + C++C E  ADAV+++CGHGG+C TCAE+L  +  + CP+CR+ I     +G  VTV
Sbjct:  225 IDQNADASEANVCWVCFEAPADAVLLQCGHGGLCITCAENLWKSR-APCPMCRQPIDVFARLGDAVTV 291          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S4F120_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F120_CHRCT)

HSP 1 Score: 63.5 bits (153), Expect = 2.140e-7
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  404 STCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 455
            STC+ICC   ADAV+++CGHGG+C  CAE      P  CP+CR +I+ V  +
Sbjct:  243 STCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 294          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S4BGL3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL3_CHRCT)

HSP 1 Score: 63.5 bits (153), Expect = 2.840e-7
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  404 STCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 455
            STC+ICC   ADAV+++CGHGG+C  CAE      P  CP+CR +I+ V  +
Sbjct:  293 STCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 344          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S4BGL5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL5_CHRCT)

HSP 1 Score: 63.5 bits (153), Expect = 4.770e-7
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  404 STCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 455
            STC+ICC   ADAV+++CGHGG+C  CAE      P  CP+CR +I+ V  +
Sbjct:  531 STCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 582          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S1EK39_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK39_HEMAN)

HSP 1 Score: 58.2 bits (139), Expect = 5.250e-7
Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 0
Query:  389 GLGGSIEVGPDARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPS--QCPVCRKTIREVLTI 455
            G GG+ E   D     +C +C +RE +A+++ECGHGG+C  CA+ L  + P+   CP+CRK    V+ I
Sbjct:    1 GGGGAYEEDED----KSCIVCLDRERNALLLECGHGGLCVPCADALWKSGPATRHCPMCRKIFTGVMRI 65          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S3ZTM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTM6_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 6.330e-7
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:  406 CFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 455
            C++CC    +AV+MECGHGG+C  C + LA+  P  CP+CR  I  VL +
Sbjct:  540 CYVCCVSRKNAVIMECGHGGICFECGKSLASRHPRNCPICRAPISAVLRV 589          
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7J7Q9S5_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9S5_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 6.390e-7
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0
Query:  406 CFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIGGIVTVASGGSL 467
            C IC + +A  V MECGHGG C  CA  L   PPS+CPVCR+ I++V+ +        GG++
Sbjct:  533 CTICYDSQASCVFMECGHGGYCWRCAHVLFARPPSECPVCRQPIQQVVELEDPAGARVGGAV 594          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ86_ECTSI4.930e-12452.92RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S0I1C8_9EUKA2.190e-947.06Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S2XWW7_9STRA1.840e-840.63Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3AG72_9EUKA4.820e-844.12Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4F120_CHRCT2.140e-750.00Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BGL3_CHRCT2.840e-750.00Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BGL5_CHRCT4.770e-750.00Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S1EK39_HEMAN5.250e-740.58Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S3ZTM6_9STRA6.330e-748.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7J7Q9S5_9CHLO6.390e-745.16RING-type domain-containing protein n=1 Tax=Scened... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 406..445
e-value: 1.2E-5
score: 34.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 406..446
score: 11.221
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 404..452
e-value: 2.0E-12
score: 46.7
NoneNo IPR availablePANTHERPTHR14879:SF5E3 UBIQUITIN-PROTEIN LIGASE CBLAcoord: 337..455
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 337..455
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 400..452
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 397..460
e-value: 1.4E-13
score: 51.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12520contigM-pyrifera_M_contig12520:1425..8827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12520.5097.1mRNA_M-pyrifera_M_contig12520.5097.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12520 1425..8827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12520.5097.1 ID=prot_M-pyrifera_M_contig12520.5097.1|Name=mRNA_M-pyrifera_M_contig12520.5097.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=468bp
MQIMRTAEEQFRQANDPSGATDGGPAFGGGGGAGVAGGVDGSFASPPAAE
GARPRRRGSMMAPTILMRESSTLFRRASVSFCRRLGEADGSFADSDLMAF
EFSDWGRRGRASRSQNSERINRSGSGGDRVPQRSSRSFHVLQDFLPRASS
AVASGGQRFTAAVTGTSSRDSHGRFAMSAERQRAGEEKEPSPRQRGGQGA
GSKSSPEDERHDRCLLQGDSGTHSVTDSYDLNSFGSYVDSDEENHEVGLS
IDGDEDDEDRDVHGGGGGGSSIGGNSFHPAPTPSPEILLAFGSAHGAAAF
SLHGSSASGHGASGLGVSRHRWSAGRDPSRRGGGGGVGGVGGAGGAAGGL
PRRVSWPGGMSTSDVGLEGAGRGGDEEGVPDMEAGLGGGLGGSIEVGPDA
RRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIR
EVLTIGGIVTVASGGSLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD