mRNA_M-pyrifera_M_contig12520.5097.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI) HSP 1 Score: 393 bits (1010), Expect = 4.930e-124 Identity = 290/548 (52.92%), Postives = 328/548 (59.85%), Query Frame = 1
Query: 1 MQIMRTAEEQFRQANDPSGATDGG-----PAFGGGGXAGVAGGVDGSFASPPAAEGARPRRRGS---------------MMAPTILMRESSTLFRRASVSFCRRLGEADGSFADSDLMAFE-------FSDWGRRGRASRSQNSE--RINRSGSG---GDRVPQRSSRSFHVLQDFLPRASSAVASGGQRFTAAVTGTSSRDSHGRFAMSAERQRAGEEKEPSPRQRGGQGAGSKSSPEDERHDRCLLQGDSGTHSVTDSYDLNSFGSYVDSDEENHEVGLSIDGDXXXXXXXXXXXXXXXXSIGGNSFH---PAPTPSP-EILLAFGSAHGAAAFSLHGSSASGHGAS--------------------GLGVSRHRWSAGRDPSRRGGGGXXXXXXXXXXXXXGLPRRVSWPGGMSTSDVGLEGAGRGGDEEGVP-----DMEAGLGG-GLGGSIEVGP----------DARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI------GGIVTV--ASGGSLA 1404
++ MRTAEEQFRQANDP+G GG AFGG GV GS P GA +MAPTILMRESS LFRRAS SFCRRLGEADGS + D+ AFE +DWGRRG RS++S+ I+ G G+RVPQRSSRSFHVLQD P A AV GGQRFTAAVTG+SSR+ H RF++S+ RQ AG EKE SPR RG GA SK +PED+RHD+CLL GDSGTHSVTDSYDLNSFGS+VDSDE++HEVGLSIDGD XXXXX +I G+SFH PA T P EILL FGSAHGAAAFSLHG S SGHG L SRHRWSA R S R G G G+PRR+SWPG +S + VG GDE V D EAG GG GGS GP R STC+ICCER ADAV+MECGHGG+C TCA LA++PP CPVCRK I+EV + G +V V ASGG +A
Sbjct: 327 VRTMRTAEEQFRQANDPNGG--GGMDASSTAFGGVDDVEAGRGVRGS----PPIGGAEXXXXXXXXXXXXXXXXXXXXXVMAPTILMRESSMLFRRASASFCRRLGEADGSLMNPDVTAFEVRFRAVELADWGRRGGRFRSRDSDIAAIDDGGGSEERGERVPQRSSRSFHVLQDCFPHARGAVRRGGQRFTAAVTGSSSREGHERFSVSSGRQLAGAEKEGSPRPRGEDGATSKRTPEDDRHDQCLLPGDSGTHSVTDSYDLNSFGSFVDSDEDSHEVGLSIDGDEEDEPRDGXXXXX---AIDGSSFHESLPATTTEPPEILLGFGSAHGAAAFSLHGGSGSGHGLCHGSXXXXXXXXXXXXXXXXXXLATSRHRWSAERGTSSRRGAGSSIHGGAG-----GMPRRLSWPGELSLASVG-------GDEVDVAAVTASDAEAGRGGVATGGSS--GPLXXXXXXXXXXXREHSTCYICCERRADAVMMECGHGGVCFTCATTLADSPPHLCPVCRKVIQEVFKLHEIREFGRVVVVPPASGGEVA 851
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S0I1C8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I1C8_9EUKA) HSP 1 Score: 65.1 bits (157), Expect = 2.190e-9 Identity = 32/68 (47.06%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 1195 DARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIG-----GIVTV 1383
D TC+ICC DAV+MECGHGG+C CA A P CP+CR I V+ +G GIV V
Sbjct: 39 DDGEEPTCWICCSGPCDAVLMECGHGGICMDCATQCAKKRPPLCPLCRARILVVVKVGAPDEAGIVQV 106
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S2XWW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWW7_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.840e-8 Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1201 RRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIGGIVTVASG 1392
R ++C +C ++AV++ECGH G+C CA+ LA P QCP+CR+ I ++L I + SG
Sbjct: 28 RGETSCLVCWNARSNAVLLECGHSGLCFPCAQALAQRYPQQCPMCRQNIVQILRIEPEIAGTSG 91
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S3AG72_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AG72_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 4.820e-8 Identity = 30/68 (44.12%), Postives = 44/68 (64.71%), Query Frame = 1
Query: 1180 IEVGPDARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIGGIVTV 1383
I+ DA + C++C E ADAV+++CGHGG+C TCAE+L + + CP+CR+ I +G VTV
Sbjct: 225 IDQNADASEANVCWVCFEAPADAVLLQCGHGGLCITCAENLWKSR-APCPMCRQPIDVFARLGDAVTV 291
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S4F120_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F120_CHRCT) HSP 1 Score: 63.5 bits (153), Expect = 2.140e-7 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 1210 STCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 1365
STC+ICC ADAV+++CGHGG+C CAE P CP+CR +I+ V +
Sbjct: 243 STCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 294
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S4BGL3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL3_CHRCT) HSP 1 Score: 63.5 bits (153), Expect = 2.840e-7 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 1210 STCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 1365
STC+ICC ADAV+++CGHGG+C CAE P CP+CR +I+ V +
Sbjct: 293 STCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 344
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S4BGL5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL5_CHRCT) HSP 1 Score: 63.5 bits (153), Expect = 4.770e-7 Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 1210 STCFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 1365
STC+ICC ADAV+++CGHGG+C CAE P CP+CR +I+ V +
Sbjct: 531 STCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARV 582
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S1EK39_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EK39_HEMAN) HSP 1 Score: 58.2 bits (139), Expect = 5.250e-7 Identity = 28/69 (40.58%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 1165 GLGGSIEVGPDARRRSTCFICCEREADAVVMECGHGGMCTTCAEHLANTPPS--QCPVCRKTIREVLTI 1365
G GG+ E D +C +C +RE +A+++ECGHGG+C CA+ L + P+ CP+CRK V+ I
Sbjct: 1 GGGGAYEEDED----KSCIVCLDRERNALLLECGHGGLCVPCADALWKSGPATRHCPMCRKIFTGVMRI 65
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7S3ZTM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTM6_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 6.330e-7 Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 1
Query: 1216 CFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTI 1365
C++CC +AV+MECGHGG+C C + LA+ P CP+CR I VL +
Sbjct: 540 CYVCCVSRKNAVIMECGHGGICFECGKSLASRHPRNCPICRAPISAVLRV 589
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Match: A0A7J7Q9S5_9CHLO (RING-type domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9S5_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 6.390e-7 Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 1
Query: 1216 CFICCEREADAVVMECGHGGMCTTCAEHLANTPPSQCPVCRKTIREVLTIGGIVTVASGGSL 1401
C IC + +A V MECGHGG C CA L PPS+CPVCR+ I++V+ + GG++
Sbjct: 533 CTICYDSQASCVFMECGHGGYCWRCAHVLFARPPSECPVCRQPIQQVVELEDPAGARVGGAV 594 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12520.5097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12520.5097.1 >prot_M-pyrifera_M_contig12520.5097.1 ID=prot_M-pyrifera_M_contig12520.5097.1|Name=mRNA_M-pyrifera_M_contig12520.5097.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=468bp MQIMRTAEEQFRQANDPSGATDGGPAFGGGGGAGVAGGVDGSFASPPAAEback to top mRNA from alignment at M-pyrifera_M_contig12520:1425..8827- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12520.5097.1 ID=mRNA_M-pyrifera_M_contig12520.5097.1|Name=mRNA_M-pyrifera_M_contig12520.5097.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7403bp|location=Sequence derived from alignment at M-pyrifera_M_contig12520:1425..8827- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12520:1425..8827- >mRNA_M-pyrifera_M_contig12520.5097.1 ID=mRNA_M-pyrifera_M_contig12520.5097.1|Name=mRNA_M-pyrifera_M_contig12520.5097.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2808bp|location=Sequence derived from alignment at M-pyrifera_M_contig12520:1425..8827- (Macrocystis pyrifera P11B4 male)back to top |