mRNA_M-pyrifera_M_contig12518.5095.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12518.5095.1
Unique NamemRNA_M-pyrifera_M_contig12518.5095.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: D7FWE1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE1_ECTSI)

HSP 1 Score: 367 bits (941), Expect = 1.710e-125
Identity = 197/257 (76.65%), Postives = 215/257 (83.66%), Query Frame = 1 
Query:    1 GVSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRSSTATSVMKGISILALDATGGGGNQAPHSSRIEGVHDA-AGVLPKG---SIDG-EGGLEQKSGNSAGGAGVVGSPGGAGQGAASGIIDVDLSG 756
            GV LE LDNTFIEMIKASVDKPLP+TVYNYKSMT RDV+ITPS+SWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGL+PE DYLLGTAERVFKDP+IL +EVTAHLDQPM+FYVYNTKTDEVRVAVVLPTN WGGEGCLGAEVGHGYLHRLPQSCRSSTATSV+KG+ ILA DATGGGG Q  +++      D   GV P G   ++ G +GG  ++     GGAGV   PGGA  G A  +IDVDLSG
Sbjct:   43 GVLLEVLDNTFIEMIKASVDKPLPLTVYNYKSMTTRDVTITPSSSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLQPEHDYLLGTAERVFKDPDILFEEVTAHLDQPMSFYVYNTKTDEVRVAVVLPTNVWGGEGCLGAEVGHGYLHRLPQSCRSSTATSVIKGMCILAADATGGGGKQLSYTAASRKKQDPNGGVAPDGFTTAVTGTDGGPAEQ-----GGAGVGVPPGGA-LGGAGNVIDVDLSG 293
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A7S2Y0B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0B4_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.320e-82
Identity = 122/171 (71.35%), Postives = 142/171 (83.04%), Query Frame = 1 
Query:    1 GVSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRSSTATSV 513
            GV L+ LDNTFIEMIKAS D+PLP+T+YNYKS T RDV I PS +W GQGMLGVTIRFDTY+NAD+N+VRVL+VVPGSP++IAGLK E DY+LGTAE+ FKDP+ L++EV  HLDQPM  YV+NT+TD VR  V+LPT  W GEGCLGA VG GYLHRLPQ CR ST  S+
Sbjct:   43 GVPLKALDNTFIEMIKASEDRPLPLTLYNYKSETTRDVVIVPSKNWPGQGMLGVTIRFDTYYNADENVVRVLDVVPGSPANIAGLKAEQDYILGTAEKAFKDPDHLIEEVKVHLDQPMEIYVFNTETDHVRTTVILPTFKWAGEGCLGASVGSGYLHRLPQRCRGSTGISL 213
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A835YI02_9STRA (GRASP55/65 PDZ-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI02_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.610e-76
Identity = 129/230 (56.09%), Postives = 157/230 (68.26%), Query Frame = 1 
Query:    1 GVSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRSSTATSVMKGISILALDATGGGGNQAPHSSRIEGVHDAAGVLPKGSIDGEGGLEQKSGNSAGGAGV 690
            G+ L++LD+T +EMIKAS +KPLPITVYNYKS + R ++ITPS     +GMLGVTIRFD+Y  ADD+LVRVL VV  SP+HIAGL PE DYLLGTAERVFKD + L DE+  HL+Q M  YVY+T+TD+VRV VVLPT  WGGEGCLGAE+ HGYLHRLP  CR++T  SV  GIS+             P    +     AAG  P  + + EG      G + GGA +
Sbjct:   45 GIPLQQLDSTLMEMIKASENKPLPITVYNYKSDSLRSITITPSRKPYYEGMLGVTIRFDSYFQADDHLVRVLSVVKNSPAHIAGLMPETDYLLGTAERVFKDTDALHDELMRHLEQTMEIYVYSTETDQVRVVVVLPTLEWGGEGCLGAEMAHGYLHRLPAQCRTTTGVSVGPGISMPTASYP-----YIPSGHELADAAAAAGTSPSSAAEPEGDKPSHDGTTRGGAAI 269
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A7S2WEH5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEH5_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.870e-75
Identity = 111/168 (66.07%), Postives = 135/168 (80.36%), Query Frame = 1 
Query:   10 LEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRSSTATSV 513
            L++LDN F+EMIK S  KPLP+T+YN KS T RDV ITP  +WGGQGMLGVTIRFDTY  A+++LVRVL+VV  SP+H+AGL+P +DYLLGTAE+VFKD   L + V+ H+D  + FYVYNT +DEVRVA+V+PTN W G+GCLG  VGHGYLHRLP  C+ ST TSV
Sbjct:   46 LKELDNKFVEMIKESEGKPLPLTIYNIKSETTRDVVITPRRNWGGQGMLGVTIRFDTYWRAEESLVRVLDVVADSPAHLAGLQPSNDYLLGTAEKVFKDTETLYEAVSQHIDSIVEFYVYNTSSDEVRVAIVMPTNEWNGDGCLGISVGHGYLHRLPHQCKQSTGTSV 213
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A7R9Y981_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y981_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.620e-72
Identity = 106/163 (65.03%), Postives = 134/163 (82.21%), Query Frame = 1 
Query:    1 GVSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSC 489
            GV L  LD TF+E+I+  VD+PLPITVYN K  ++R+V+ITPS++WGG G+LGVTIRFDTY N +++LVRVLEV   SP+ IAGLK  +DYLLGT+ERVFK+P++L +EVT+H+D P+  YVYNT+TD VR  V+LPTN WGG+G LGA VGHGYLHRLP+ C
Sbjct:   62 GVPLRTLDATFVELIEKHVDQPLPITVYNCKDNSQREVTITPSSTWGGIGLLGVTIRFDTYANMEESLVRVLEVARHSPAEIAGLKAGEDYLLGTSERVFKNPDVLFEEVTSHIDNPLEMYVYNTETDAVRTIVILPTNNWGGDGTLGASVGHGYLHRLPERC 224
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A7S3ZJU3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJU3_9STRA)

HSP 1 Score: 225 bits (573), Expect = 2.330e-70
Identity = 111/171 (64.91%), Postives = 126/171 (73.68%), Query Frame = 1 
Query:    1 GVSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRSSTATSV 513
            GV L +LD+TFI+ IK S D PLP +VYN KS   RDVSITP+ +WGGQGMLGVTIRFDTY+ AD+ LVRVL V  GSP+  AG     DYLLGTAERVF D + LLDE   HLD  +  YVYN  +DEVRVAVV+PT  WGG+GCLGA+V HGYLHRLP  CR S   SV
Sbjct:   43 GVELRELDSTFIDKIKGSEDVPLPCSVYNLKSRRTRDVSITPTRNWGGQGMLGVTIRFDTYYKADECLVRVLSVADGSPAQAAGFIAGADYLLGTAERVFSDADALLDECQLHLDAAIEVYVYNVDSDEVRVAVVVPTYQWGGDGCLGADVAHGYLHRLPTRCRGSDGVSV 213
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: F0YJB4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJB4_AURAN)

HSP 1 Score: 214 bits (546), Expect = 6.920e-67
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 1 
Query:    1 GVSLEKLDNTFIEMIKASV---------------DKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLP 480
            GV L +LD+TFI+ IKA+                D+PLP  VYN KS   R V+ITP+ +WGGQGMLGVTIRFDTYH AD++LVRVLEV PGSP+ IAGL+   DYLLGTAERV  D      E T HLD+P+ FYVYNT+TDEVRV V+LPT +WGG GCLGA V HGYLHRLP
Sbjct:   31 GVELRELDSTFIDKIKAARPRRLRSFAPRDAPTRDRPLPCVVYNLKSRQTRSVTITPTRNWGGQGMLGVTIRFDTYHKADEHLVRVLEVAPGSPAEIAGLRAGTDYLLGTAERVLND------ECTLHLDKPVEFYVYNTETDEVRVVVLLPTYSWGGGGCLGAAVAHGYLHRLP 199
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A7S2H0B5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0B5_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.470e-66
Identity = 101/162 (62.35%), Postives = 129/162 (79.63%), Query Frame = 1 
Query:   10 LEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRS 495
            L+ LDN F+++IK   +KPLP+T+YN KS T RDV ITP  +WGGQGMLGVTIRFD++  A+++LVRVLEVV  SP+ +AGL   DDYLLGTAE+VFK+ + L  EV+ H+++ + FYVYNTK+DEVR AVV+PTN W G+G LG  VGHGYLHRLP SC++
Sbjct:   46 LKVLDNKFVDLIKEFENKPLPLTIYNIKSDTTRDVVITPRRNWGGQGMLGVTIRFDSFWQAEESLVRVLEVVRDSPAELAGLSANDDYLLGTAEKVFKNTDTLYTEVSKHVEETIEFYVYNTKSDEVRTAVVMPTNDWKGQGSLGISVGHGYLHRLPASCKT 207
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: W7U145_9STRA (Golgi reassembly-stacking protein 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U145_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.010e-64
Identity = 106/198 (53.54%), Postives = 141/198 (71.21%), Query Frame = 1 
Query:   10 LEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQ-SCRSS-------------TATSVMKGISILALDATGGGG 561
            L ++D TFI++I+   D+PL + +YN KS T RD+ +TPS +W GQGMLGVTIRFD Y  ++++LVRVLEVVP SP+ +AGL+P  D+LLGTAE VFKDP++L + +  +L+Q + FYVYNT+TD VR A ++P   WGG GCLGAE+GHGYLH LPQ SCRS+              AT   + +  +A +ATGGGG
Sbjct:   59 LRQVDYTFIDLIREFEDRPLELKIYNSKSQTVRDLVLTPSKNWDGQGMLGVTIRFDYYDQSEEHLVRVLEVVPDSPAELAGLQPMTDFLLGTAETVFKDPDVLEEVLGRNLEQTIDFYVYNTETDTVRTATLMPNLKWGGRGCLGAEIGHGYLHGLPQKSCRSNGTSVFKVPAPHIADATRASEAVGDMADEATGGGG 256
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BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Match: A0A812RJH1_SYMMI (Gorasp2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RJH1_SYMMI)

HSP 1 Score: 205 bits (521), Expect = 6.000e-63
Identity = 95/165 (57.58%), Postives = 125/165 (75.76%), Query Frame = 1 
Query:    4 VSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQGMLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVFKDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAEVGHGYLHRLPQSCRSS 498
            V L  LD TFI++IKAS D  LP+TVYN+KS T R V++TPS +W G+GMLG+TIRFDTYHNADD + RVL+V   SP+ +AGL+   DY+LGT+E+VF+D + L DE+  H+++P+ FYVYN+ TDEVR  V++P+N WGGEG LG  V  G+LHR+P   R S
Sbjct:   44 VPLRTLDTTFIDLIKASEDVILPLTVYNWKSNTTRQVALTPSRNWPGEGMLGITIRFDTYHNADDYVYRVLDVEVNSPAELAGLQANSDYILGTSEKVFRDVDSLFDELKQHVNKPLEFYVYNSDTDEVRNVVIMPSNDWGGEGILGGAVACGFLHRIPSDNRDS 208
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12518.5095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWE1_ECTSI1.710e-12576.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2Y0B4_9STRA1.320e-8271.35Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835YI02_9STRA5.610e-7656.09GRASP55/65 PDZ-like domain-containing protein n=1 ... [more]
A0A7S2WEH5_9STRA1.870e-7566.07Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9Y981_9STRA1.620e-7265.03Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3ZJU3_9STRA2.330e-7064.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YJB4_AURAN6.920e-6762.29Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2H0B5_9STRA1.470e-6662.35Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
W7U145_9STRA1.010e-6453.54Golgi reassembly-stacking protein 2 n=1 Tax=Nannoc... [more]
A0A812RJH1_SYMMI6.000e-6357.58Gorasp2 protein (Fragment) n=1 Tax=Symbiodinium mi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12518contigM-pyrifera_M_contig12518:2363..7913 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.5
Seed ortholog evalue6.1e-100
Seed eggNOG ortholog2880.D7FWE1
Preferred nameGORASP1
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0002009,GO:0002165,GO:0002790,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005793,GO:0005794,GO:0005795,GO:0005797,GO:0005798,GO:0005801,GO:0005829,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006996,GO:0007030,GO:0007275,GO:0007399,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009306,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009893,GO:0009987,GO:0010256,GO:0010604,GO:0010721,GO:0010769,GO:0010771,GO:0010975,GO:0010977,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016333,GO:0019222,GO:0019538,GO:0022008,GO:0022603,GO:0022604,GO:0022607,GO:0030154,GO:0031090,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032940,GO:0033036,GO:0033116,GO:0034645,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0036211,GO:0042886,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044719,GO:0045184,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046903,GO:0046907,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048814,GO:0048856,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051960,GO:0051961,GO:0060255,GO:0060284,GO:0060429,GO:0060562,GO:0061024,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070085,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090114,GO:0097708,GO:0098588,GO:0098791,GO:0120035,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903320,GO:1903322,GO:1904666,GO:1904668,GO:2000026,GO:2000171
EggNOG free text desc.Golgi organization
EggNOG OGsCOG5233@1,KOG3834@2759
Ec32 ortholog descriptionPDZ domain
Ec32 orthologEc-09_004030.1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size759
Cds size759
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12518.5095.1prot_M-pyrifera_M_contig12518.5095.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12518 2363..7913 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815767.5814695-CDS-M-pyrifera_M_contig12518:2362..24691622815767.5814695-CDS-M-pyrifera_M_contig12518:2362..2469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 2363..2469 +
1692277560.0213377-CDS-M-pyrifera_M_contig12518:2362..24691692277560.0213377-CDS-M-pyrifera_M_contig12518:2362..2469Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 2363..2469 +
1622815767.5975897-CDS-M-pyrifera_M_contig12518:3608..37051622815767.5975897-CDS-M-pyrifera_M_contig12518:3608..3705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 3609..3705 +
1692277560.0342448-CDS-M-pyrifera_M_contig12518:3608..37051692277560.0342448-CDS-M-pyrifera_M_contig12518:3608..3705Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 3609..3705 +
1622815767.6133463-CDS-M-pyrifera_M_contig12518:4857..50401622815767.6133463-CDS-M-pyrifera_M_contig12518:4857..5040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 4858..5040 +
1692277560.0442495-CDS-M-pyrifera_M_contig12518:4857..50401692277560.0442495-CDS-M-pyrifera_M_contig12518:4857..5040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 4858..5040 +
1622815767.6270442-CDS-M-pyrifera_M_contig12518:5638..57421622815767.6270442-CDS-M-pyrifera_M_contig12518:5638..5742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 5639..5742 +
1692277560.0562873-CDS-M-pyrifera_M_contig12518:5638..57421692277560.0562873-CDS-M-pyrifera_M_contig12518:5638..5742Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 5639..5742 +
1622815767.6401987-CDS-M-pyrifera_M_contig12518:7645..79131622815767.6401987-CDS-M-pyrifera_M_contig12518:7645..7913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 7646..7913 +
1692277560.0658348-CDS-M-pyrifera_M_contig12518:7645..79131692277560.0658348-CDS-M-pyrifera_M_contig12518:7645..7913Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12518 7646..7913 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12518.5095.1

>prot_M-pyrifera_M_contig12518.5095.1 ID=prot_M-pyrifera_M_contig12518.5095.1|Name=mRNA_M-pyrifera_M_contig12518.5095.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=253bp
GVSLEKLDNTFIEMIKASVDKPLPITVYNYKSMTKRDVSITPSNSWGGQG
MLGVTIRFDTYHNADDNLVRVLEVVPGSPSHIAGLKPEDDYLLGTAERVF
KDPNILLDEVTAHLDQPMAFYVYNTKTDEVRVAVVLPTNTWGGEGCLGAE
VGHGYLHRLPQSCRSSTATSVMKGISILALDATGGGGNQAPHSSRIEGVH
DAAGVLPKGSIDGEGGLEQKSGNSAGGAGVVGSPGGAGQGAASGIIDVDL
SG*
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mRNA from alignment at M-pyrifera_M_contig12518:2363..7913+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12518.5095.1 ID=mRNA_M-pyrifera_M_contig12518.5095.1|Name=mRNA_M-pyrifera_M_contig12518.5095.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5551bp|location=Sequence derived from alignment at M-pyrifera_M_contig12518:2363..7913+ (Macrocystis pyrifera P11B4 male)
GGAGTCTCGTTGGAGAAGCTGGACAACACCTTTATCGAGATGATCAAGGC
TTCCGTCGACAAGCCTCTCCCCATCACCGTGTACAACTACAAGTCTATGA
CCAAAAGGTGAGCCAACTCCCAAACCCACGCGAAACTAAACAGGACCTCA
GTTGGCAGGGAGCGCGGGCGGGAGGGACAGGGAAGGTTTGGTGACTCATC
TCCCTGCCTTAGGAGGGTGGGAGGGGCGAGTGGGGGGGAGGGAGCGACAT
CGCACATGCCTATGACCAACGTCGATCCGGTAAATTGTAAAGGGTTAACG
ATGTCCTCACGGATATCTCGCGTTGGGGTGCTGCCGGTGCTGATATGTGT
TGACATGCGGCCTCGTGGGCGAGAGCCATCGGTGAAACACCATGCTGCGG
GGAGGAGCGGGGAGTAGGGGGTGGGCGGGTGGTTACGGTGGCGATGGCCT
TTGAGAAACGGAAGGGAGGGGGTGTACTCATGCCATGCATGGCCATGGTT
GTGTCGCCATAGACCCTCGCATCCCTGTATACTATGGCGGGACGGAGCAC
GTCGGGTTTTCACCGCCAGGCAGACATTGCTTGCACCAAGCGCGAAGCGC
CCTGTGTTCGACAAGTCGCATGAAGGCTGAGCTGCATCCTACTAAGAACC
GCTTGTGAGGCACACTTGCAATGGACGACAGCTTCGAATTAACTGCGGGC
GGGGGGGGGGGGGGGGGGGGGACCACGATAGCGATGGCCGTGGCGAAACA
GGAGGAGGGGGGGGGGGGTGGAAGGGTGCGGTTACCGGGTTTGAACCGTT
GCGGCTGGAGAAGATCTCGTCGCGTCACCTCCGACTCGTTGCTGCCTGCT
CTTTTTGATCGGCATTCTCTTACCGCGCAGTGACTGGTTGCACTGTGTGG
TGTCCTCTAGCACCAGAAGCTCAAGCGGTGCTTTGAAGTTTTAGTGGTGT
TGGGTGCGAGTGCCGGGGACACGCCGTGTCATTGATCTCTCCCCTCGTAA
TATCTCGCCCATGTTTGTGCCGATGCTTTCTATTAACGCGTGCGAGTGTC
TCCGCAGCCGTGGATGCACGCACACAAGCTGCGCTGCCGCCCCATGCCAG
GCCTCCGCGCGCAACGGTCCTGCCCTGACGCTCTATCTGTATTTTCCGTG
ATTATTTCCCTTCCCCCCACTGCCCCTCCTCGTGCTTTGTCACGACGGCT
TGAACGTTTTGTCCGCGTCTCCTTTTTGACAAATGGCGGACAACAGAGAC
GTTTCTATCACGCCTTCGAATAGTTGGGGGGGACAGGGAATGCTCGGGGT
GACGATTCGGTTCGACACCTACCACAATGCTGACGATAACCTGGTGAGTT
TTATTTCCTCGCGGCATGCGCGGGCTGCGACTGCCAATGCTTGGCGCTGT
GCTGCTGAAGGCGTGCACCGTCGGTCTCGGCCCCTTGCTTTTTCGTAGTT
TTGGTGCGTTTTTTTAATTGTTTCGTCGTAGTTTATTCGAGGAGCTTCCT
GGCCCGCTTTCCTCTTGATTTTCTCGCTTGTGTTAGTCGGCATGCATACG
CTCACCAACCTTAGCGATAAGCCGCGTGCCGTGGTTGGCCGACGCATAAA
ACACACTGTAATGTAACAGTACGGGCCCACGAATAAGAATTACGGTATTA
AGGGCATTAGGATCACTTTGCGCAGGACGTTGAGGACACTACTGCTGTAG
AGCAACACATCGTGCTCAGCGGCGAGTGCTAGACTGAATCCTATCTGCCA
GGTGAACAATAGCCTATGCTTGAGGTTGCTTGAGGGCGGTGGCACAGGTG
GGTTCCAAGGCGTGCTCGCATTAACGACGTGGATGGTTTTTATTGGCGGG
CCTATACTGTAATCAAGTGTATAGGCGACTCAGCAGTACGAGATATCGTA
CAGTCCGGTGGTGAGTATCGCAGTGTCAATCGCAGCAGATTCCGCCGGAC
CGCGTTGTCGCCTTTTATACCCGACAACGCTGTGTAACACCTGGCACATT
TTACTCCTAAAGGTGTATGGTACCGCTTTGGTTTGAAGTGTTTGCGTAGA
CATGTAGGCAAATCGTGATTGATCTCTGTGTGCGCTATTTGCTATTAGTG
TGGATTCCCGGATGCTCGCTTGTACCCCACGGAGTCGGGCTCGGTGTGCT
TTTTCCTGCCCCCTGTTGACTCACGTGCAAGATGTGAACGCTGGAGGCAA
AGCCACCCACTCCTGCACACATATGCATACGCTCCGCGCGCGCTCCTTGC
CAGGCGGTCGGGAGTCGATTTTGACCGCCGGTATTTTCTCCCCACGTACA
TAGCACTTTTCAACTCTTGAGACTGTCGACATTAACGCACGTCGCGGACC
CACTATAATAGCAATAGTTGTGAGGGTCAGGTCTGGGGTGGACTCTCTTG
TTTGTCGAGCCTTCAGCACGCACGCGACCATTGTCGAGCATTCAGCACGG
ACGCGGCAATAAACCTATACGACTTTTCGCGATCGGCGTTTACAGGTGCG
AGTCCTGGAAGTAGTTCCGGGATCTCCGTCCCACATCGCGGGTCTGAAGC
CGGAGGACGATTACCTGCTGGGCACGGCAGAACGCGTGTTTAAGGACCCC
AACATACTGCTGGACGAGGTGACGGCCCATCTCGATCAGCCTATGGCGTT
CTACGTCTACAACACAAAAACGGACGAGGTTCGTGATTGTCTTTCATGAT
GCGGCAGGTTGTCTGTTAAATGGCCCCGGTGTTGAAGGCTAGAGCGGTCG
GTGTGTAGGTGTGCGTGTGGGCGTACGTGCGTGTTGTGTGCGTTGATTTT
TGTACCCGAGCATGTCCACGTATTTATGTATTATGCGTGCATGTGCCGTG
TGCGCGCCTACGTTGCTGTTCTGCCCTTGCGAGTTGGATGTGCCTCTTGG
TCGTGTTCTGTTCGCTTGTTACCGTGTGCCGTTGCGTGTGCGTGAATCGT
ACCGTAGTCTGGTTTTCTGCAGTACCGGGTCAGCACCCCCATCGGGCGGA
TGCCTGACTTGGTTTGTTCGCCTCTTTTGTGCTTTTTCCGTGGTCGACTT
CGGGAAAGAAGCTGCGCCGCACGCCTGGCCAACACGCTCAAAACAATTAG
TTTTTGCCAGTGAATGACGTGGAAAAGCCTTCGGCCAGGTCATTTTACGT
TGGCGGATGATGCTGTCTTAACGTACTACTGCAACTACTGCTGGGGTAGC
GGCCGAACGTCTAACGTCTTGGAGTATTCGACTGCCCCACCGCCGCCTGC
TCCGTTGGTGTTGCTCTCTGTGACAGGTGCGAGTTGCGGTGGTTCTGCCA
ACGAATACGTGGGGTGGGGAAGGGTGCCTTGGAGCGGAGGTGGGACACGG
CTATCTCCATCGTCTTCCGCAATCGTGCCGGTGAGATTTCTCCGCGCGGA
ATCAATTTCTGTTCGCCGAGAGGGAAGCCTGCTGTTAATGAGGCGCGAGC
CTTTGTTTCTTGGTGTTCCAAGGATAAAAAGCCTGTTTATAACGGATCGT
ACGAGCGTAGGGTACCTTGTTCTTGGTGTGTGGATTCAATATTTTTTTCG
GCCACGTTTGTCCACCGCACCTAACGCACACGGCACCAATGCCGGTCCCG
GCGGGCTCTGTGCACGCACACACTAGCGAAATACTAACGAAATCTTATCA
TGTTGGTCCGGTTGCAAGTCGTTTCAGAGTTCGTCGAGCTAGGTGCGGCA
ACGTGTGTCTAGCAACATGGCTGGGTGATGGTTTTCAAAAAAACAGAACC
GTACTACTCTATCATAACGGTATCTGTTTTTTTAGTTCTACCGAACGAAA
CCCAACTCTATGAGTTCTCGTAGGCAGAATGTGTCTGTCCACAGCAACGC
ACGGGTGGTGTCGCTATCACATGCTGCAGATGGTATTGTAAGGCCCACCC
TCCTACTGATGAGGGAACGGATAAGCTCTGTTGTAGATGTCGTACAGCAG
TAGTAGTGGTGGCACATACTATGAAAAGCTCTCTGTTGGACATATGCCAA
GTGCAGATTTTTCGTCTTCAAATCATGCCAAATTCGAGTTGGGGAACCGG
GAAACACAATCAAAGCGAGTACGTGTACAAAGGGTTCAAGGGTCAGACCG
ACAAGCCGAGCGTACAATGACGCTGACCCTGGCCTCAAGTGCCCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGATTTTGCTT
CGGTTTTCGCTGCCGCCGCCACGTCTGCTGCTGCTGCTGCCGCTGACGAC
TTTTGTTCCCTGAAAGAATGAGCCCAAACGTTACGGATACAGGCATACGT
AGATGTTTGTTCGTGCTGGTTGAACACAACAATCCGTATTCGCCCAGCAT
GGTGCATCGCAGATTTGCCGGCTGCAGGTATTGAGGTCGCACCTGATTAC
CACCAATTACTAGTAGGAAAGTGTCGTCTGGAGCACTTGAATCCGAGCCG
AAAATCGATATCGCGATCCAACGAGCGGTAGTGGACGATGCAAACCCGGC
TGCCTTGAATACGACCTGAGCACAGCAATCGACGGCACTCGGCCTGTAGG
GCAAGCGCCTTGGTGGAATTATTACTCGGAAGCGCCTTGGTGAAAATTTA
CTCGAAGTGCTGGATTAGCTGCATCGCTAACAGAAACCGCGGGGTAACGG
CAACGCACCTCGCCGCACCGCTCTGTAAATGCTAGCATCCCGGGGGGGGA
GGGTTTGTTCACGCTTCGCAAAGCTACCCTCTTCCGCGATGTTATGGTTG
GCCAAGCACGAACCAACCCCCAACGCGAGGCATCTTGTTCCCCAGACACG
CACTGCACCCTCTCGATACAAAAATCATTCAGCCAAAGGTTTGGACGGTG
CTGCCGTGCATGGGCACCGAAACTTTTTTTGTTCTGCATCGGGACCCGCC
CCGCCGAGCTTATTTGCTGCCAAAAACCTTGCAAACGTTATCAGTTTCTC
CAATTTTGTCTCAAGAGGTCTTTTTCTCCACCACCAGCCTCAAACGACCG
ATATGCTACAGCCAAAGGCCCTCCCCTCCGTCTCAGCCCCCACCTCACTT
TCCTGCCTTGTTGACGGCGGGCGCTCCTATCATGCCGCATTGCATCTCAT
GATATCCCATCGCATAGCGTTTCGCATATATAGCTTGATGGCATAATCCC
TCATCGTATGATGTGCATGATACAACTTATCGCACGAAGCTTGCAAACGT
GAGTTCTGAGGAGAAAAAATCGACGTCTTACAGCTTTATTTGTCTTCATT
TTTCTCCAAATATGACACCATATTGCATTGCAGGAGCTCGACTGCCACGA
GCGTGATGAAAGGGATCTCCATTCTTGCTCTGGATGCCACCGGTGGCGGC
GGTAATCAGGCGCCCCACTCGTCGCGAATAGAGGGCGTTCATGACGCAGC
AGGCGTTCTCCCGAAGGGGTCGATTGACGGGGAAGGGGGGTTGGAACAGA
AGAGTGGCAACAGTGCGGGTGGTGCGGGGGTAGTAGGTTCTCCAGGCGGT
GCAGGGCAGGGGGCGGCGAGCGGTATAATCGACGTGGATTTGTCGGGGTA
A
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12518:2363..7913+

>mRNA_M-pyrifera_M_contig12518.5095.1 ID=mRNA_M-pyrifera_M_contig12518.5095.1|Name=mRNA_M-pyrifera_M_contig12518.5095.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1518bp|location=Sequence derived from alignment at M-pyrifera_M_contig12518:2363..7913+ (Macrocystis pyrifera P11B4 male)
GGAGTCTCGTTGGAGAAGCTGGACAACACCTTTATCGAGATGATCAAGGC
TTCCGTCGACAAGCCTCTCCCCATCACCGTGTACAACTACAAGTCTATGA
CCAAAAGGGAGTCTCGTTGGAGAAGCTGGACAACACCTTTATCGAGATGA
TCAAGGCTTCCGTCGACAAGCCTCTCCCCATCACCGTGTACAACTACAAG
TCTATGACCAAAAGAGACGTTTCTATCACGCCTTCGAATAGTTGGGGGGG
ACAGGGAATGCTCGGGGTGACGATTCGGTTCGACACCTACCACAATGCTG
ACGATAACCTGAGACGTTTCTATCACGCCTTCGAATAGTTGGGGGGGACA
GGGAATGCTCGGGGTGACGATTCGGTTCGACACCTACCACAATGCTGACG
ATAACCTGGTGCGAGTCCTGGAAGTAGTTCCGGGATCTCCGTCCCACATC
GCGGGTCTGAAGCCGGAGGACGATTACCTGCTGGGCACGGCAGAACGCGT
GTTTAAGGACCCCAACATACTGCTGGACGAGGTGACGGCCCATCTCGATC
AGCCTATGGCGTTCTACGTCTACAACACAAAAACGGACGAGGTGCGAGTC
CTGGAAGTAGTTCCGGGATCTCCGTCCCACATCGCGGGTCTGAAGCCGGA
GGACGATTACCTGCTGGGCACGGCAGAACGCGTGTTTAAGGACCCCAACA
TACTGCTGGACGAGGTGACGGCCCATCTCGATCAGCCTATGGCGTTCTAC
GTCTACAACACAAAAACGGACGAGGTGCGAGTTGCGGTGGTTCTGCCAAC
GAATACGTGGGGTGGGGAAGGGTGCCTTGGAGCGGAGGTGGGACACGGCT
ATCTCCATCGTCTTCCGCAATCGTGCCGGTGCGAGTTGCGGTGGTTCTGC
CAACGAATACGTGGGGTGGGGAAGGGTGCCTTGGAGCGGAGGTGGGACAC
GGCTATCTCCATCGTCTTCCGCAATCGTGCCGGAGCTCGACTGCCACGAG
CGTGATGAAAGGGATCTCCATTCTTGCTCTGGATGCCACCGGTGGCGGCG
GTAATCAGGCGCCCCACTCGTCGCGAATAGAGGGCGTTCATGACGCAGCA
GGCGTTCTCCCGAAGGGGTCGATTGACGGGGAAGGGGGGTTGGAACAGAA
GAGTGGCAACAGTGCGGGTGGTGCGGGGGTAGTAGGTTCTCCAGGCGGTG
CAGGGCAGGGGGCGGCGAGCGGTATAATCGACGTGGATTTGTCGGGGTAA
GAGCTCGACTGCCACGAGCGTGATGAAAGGGATCTCCATTCTTGCTCTGG
ATGCCACCGGTGGCGGCGGTAATCAGGCGCCCCACTCGTCGCGAATAGAG
GGCGTTCATGACGCAGCAGGCGTTCTCCCGAAGGGGTCGATTGACGGGGA
AGGGGGGTTGGAACAGAAGAGTGGCAACAGTGCGGGTGGTGCGGGGGTAG
TAGGTTCTCCAGGCGGTGCAGGGCAGGGGGCGGCGAGCGGTATAATCGAC
GTGGATTTGTCGGGGTAA
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