prot_M-pyrifera_M_contig102413.509.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig102413.509.1
Unique Name	prot_M-pyrifera_M_contig102413.509.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	105

Homology

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: UPI001AA1A1FE (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1A1FE)

HSP 1 Score: 128 bits (321), Expect = 2.510e-35
Identity = 64/105 (60.95%), Postives = 79/105 (75.24%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLT-TPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTWHRRIV 104
            CVTWTL A+H AKLR+AH++V+LRVIGF        T  S  + L+ TRCESIETTIRKR LFFAGA+ RQ + RLP+R++FGT+ GG +P+PGGQ KTW R I 
Sbjct:   14 CVTWTLNADHFAKLRSAHHEVLLRVIGFQRRLRTDHTTLSYAKALRITRCESIETTIRKRRLFFAGAVVRQHEGRLPSRLMFGTIAGGGSPKPGGQPKTWPRAIA 118

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: UPI001AA1AADC (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001AA1AADC)

HSP 1 Score: 107 bits (266), Expect = 7.220e-27
Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 0

Query:   42 RRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTWHRRIV 104
            + LK TRCESIETTIRKR LFFAG +ARQSK+RLP+RV+FGT+ GGENPRPGGQ KTWHR +V
Sbjct:   18 KALKMTRCESIETTIRKRRLFFAGGVARQSKDRLPSRVMFGTIAGGENPRPGGQVKTWHRCVV 80

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5JYE2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE2_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 3.740e-20
Identity = 43/104 (41.35%), Postives = 64/104 (61.54%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTWHRRIV 104
            C TW+  + H   LR+ H++++LRVIG+          S  + LK   C+S+E TIR+R L FAG++ARQ   RLP R++FG + GGE  R GGQ + W + ++
Sbjct:    8 CTTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLFAGSLARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVL 111

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 4.160e-20
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTWHRRIV 104
            C+TW+  + H   LR+ H++++LRVIG+          S  + L+   CES+E TIR+R L FAGA+ARQ   RLP R++FG + GGE  R GGQ + W + ++
Sbjct:  140 CMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLRRVECESVEPTIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVL 243

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 9.730e-20
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTW 99
            C+TW+ R  H   L+T H++++LRVIG+          S  + LK   C+S+E T+R+R L FAGA+ARQ   RLP R++FG +VGGE+P  G   + W
Sbjct:  119 CMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 217

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 1.970e-19
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTW 99
            C+TW+ R  H   L+T H++++LRVIG+          S  + LK   C+S+E T+R+R L FAGA+ARQ   RLP R++FG +VGGE+P  G   + W
Sbjct:  170 CMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 268

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.170e-19
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTW 99
            C+TW+ R  H   L+T H++++LRVIG+          S  + LK   C+S+E T+R+R L FAGA+ARQ   RLP R++FG +VGGENP  G   + W
Sbjct:  421 CMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGENPGRGSPEQNW 519

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BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 2.290e-19
Identity = 44/99 (44.44%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTW 99
            C+TW+ R  H   L+T H++++LRVIG+          S  + LK   C+S+E T+R+R L FAGA+ARQ   RLP R++FG +VGGENP  G   + W
Sbjct:  119 CMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGENPGRGSPEQNW 217

[Close]

BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 2.940e-19
Identity = 43/99 (43.43%), Postives = 62/99 (62.63%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTW 99
            C+TW+ R  H   L+T H++++LRVIG+          S  + LK   C+S+E T+R+R L FAGA+ARQ   RLP R++FG +VGGE+P  G   + W
Sbjct:  138 CMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 236

[Close]

BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 3.010e-19
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0

Query:    1 CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCESIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTWHRRIV 104
            C+TW+  + H   LR+ H++++LRVIG+          S  + LK   C+S+E TIR+R L FAGA+ARQ   RLP R++FG + GGE  R GGQ + W + ++
Sbjct:  492 CMTWSPLSRHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRFECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVL 595

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig102413.509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001AA1A1FE	2.510e-35	60.95	hypothetical protein n=1 Tax=Vibrio parahaemolytic...	[more]
UPI001AA1AADC	7.220e-27	77.78	hypothetical protein n=1 Tax=Vibrio parahaemolytic...	[more]
A0A6H5JYE2_9PHAE	3.740e-20	41.35	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5JAH7_9PHAE	4.160e-20	42.31	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JLH5_9PHAE	9.730e-20	43.43	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KLX9_9PHAE	1.970e-19	43.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KA81_9PHAE	2.170e-19	44.44	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K4M0_9PHAE	2.290e-19	44.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JWS4_9PHAE	2.940e-19	43.43	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KS82_9PHAE	3.010e-19	42.31	Reverse transcriptase domain-containing protein (F...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig102413	contig	M-pyrifera_M_contig102413:4..318 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig102413.509.1	mRNA_M-pyrifera_M_contig102413.509.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig102413 4..318 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig102413.509.1 ID=prot_M-pyrifera_M_contig102413.509.1|Name=mRNA_M-pyrifera_M_contig102413.509.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
CVTWTLRAEHLAKLRTAHYQVILRVIGFSADFVLTTPPSRTRRLKTTRCE
SIETTIRKRPLFFAGAMARQSKERLPNRVIFGTMVGGENPRPGGQFKTWH
RRIV*