mRNA_M-pyrifera_M_contig125070.5084.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125070.5084.1
Unique NamemRNA_M-pyrifera_M_contig125070.5084.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A7S1CF60_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CF60_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.740e-57
Identity = 93/130 (71.54%), Postives = 106/130 (81.54%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR---IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VY+VRH  E+  YVMKVIKL+G+PR EREA RNEV LMQRL HPNIVAYK+SF  + G++LCIVMT CDGGDL +R+   +    +E QVLHWFVQ  LGLHFMH NKVLHRDIKTQNIFLLGNGRLVL
Sbjct:   17 KVYLVRHRTERMMYVMKVIKLKGIPRKEREACRNEVELMQRLQHPNIVAYKESFFAKHGEQLCIVMTNCDGGDLQQRINGAKRKLFSEDQVLHWFVQICLGLHFMHRNKVLHRDIKTQNIFLLGNGRLVL 146
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A5A8CUE2_CAFRO (Protein kinase domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUE2_CAFRO)

HSP 1 Score: 194 bits (494), Expect = 7.460e-56
Identity = 95/130 (73.08%), Postives = 113/130 (86.92%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR---IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VYVVRH+ E KHYVMKVIK+RG+P++EREA +NEV +MQRLPHPNIVAYKDSF+VQ GDKLCIVMT+CDGGDLS R+E+ R   + E Q+LHWFVQ ALGL  MH++KVLHRD+KT NIFLL +GRLVL
Sbjct:   17 KVYVVRHIGENKHYVMKVIKMRGIPKAEREACKNEVAIMQRLPHPNIVAYKDSFSVQRGDKLCIVMTYCDGGDLSARLEQQRGKLLPEDQILHWFVQIALGLGCMHSSKVLHRDLKTANIFLLSSGRLVL 146
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A7S1UB12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB12_9STRA)

HSP 1 Score: 165 bits (417), Expect = 2.250e-47
Identity = 80/130 (61.54%), Postives = 103/130 (79.23%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR---IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VY++RH VE+K   +KVIK++ +PR EREA R EV L++RL HPNIV YK+SF  +  + LCIVM +CDGGDL   ++K R     E++VLHWFVQ ALGLH+MH+N++LHRD+KTQNIFLLGNGRLVL
Sbjct:   17 KVYLMRHKVERKLKCVKVIKVKNIPRKEREACRVEVELLRRLNHPNIVGYKESFLTRNKESLCIVMEYCDGGDLCDVIKKARRQLFPESKVLHWFVQMALGLHYMHSNRILHRDLKTQNIFLLGNGRLVL 146
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A8J2SGK3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGK3_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.320e-44
Identity = 80/132 (60.61%), Postives = 101/132 (76.52%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR-----IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VY++RH  E+    +KVIK++ +P+ EREA R EV LM+RL HPNIVAY+DSF  +  + LCIVMT+CDGGDL  ++ +         EA+VLHWFVQ ALGLH+MH N+VLHRD+KTQNIFLLGNGRLVL
Sbjct:   17 KVYLMRHRQERTLQCVKVIKIKNIPKKEREACRAEVQLMKRLRHPNIVAYRDSFLARNRESLCIVMTYCDGGDLGNQITQAAKRRRPFTEAKVLHWFVQMALGLHYMHANRVLHRDLKTQNIFLLGNGRLVL 148
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: D8LPU9_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPU9_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 2.890e-43
Identity = 78/130 (60.00%), Postives = 99/130 (76.15%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR---IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VY++RH  +++    K+IK++ +PR EREA R EV LM+RL HPNIV YKDSF     D LCIVM +CDGGDLS +++  R     E+++LHWFVQ ALGLH+MH+  VLHRD+KTQNIFLLGNGRLVL
Sbjct:   17 KVYLMRHRQQRRLVCAKIIKIKNIPRKEREACRTEVDLMRRLHHPNIVGYKDSFLTPRKDHLCIVMEYCDGGDLSTQIKNARKRLFPESKILHWFVQIALGLHYMHSRLVLHRDLKTQNIFLLGNGRLVL 146
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A7S2MCS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCS7_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.880e-42
Identity = 70/115 (60.87%), Postives = 89/115 (77.39%), Query Frame = 1 
Query:   46 MKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLS---KRVEKGRIAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +KVIK++ +PR EREA + EV L++RL HPNIV Y+DSF  +  + LCIVM +CD GDL    K  +K    E+++LHWFVQ ALGLH+MH N+VLHRD+KTQNIF+LGNGRLVL
Sbjct:    1 VKVIKVKDMPRKEREACKIEVDLLRRLNHPNIVGYRDSFMHKNKEALCIVMQYCDAGDLHIQIKSAKKVLFPESKILHWFVQMALGLHYMHENRVLHRDLKTQNIFMLGNGRLVL 115
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A836CGE2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 9.610e-42
Identity = 72/130 (55.38%), Postives = 102/130 (78.46%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR---IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VY++RH  E+K   MKVIK++ +PR EREA R EV L++RL HPNIV Y++SF     D LCI M +CDGGDL ++++  R    +E+++LH+FVQ +LGLH+MH++++LHRD+KTQN+FLLGNGR+VL
Sbjct:   17 KVYLMRHREERKLLCMKVIKIKNIPRKEREACRMEVELLKRLHHPNIVGYRESFLTPRKDCLCIAMEYCDGGDLCEQIKGARRRLFSESKILHFFVQMSLGLHYMHSHRILHRDLKTQNVFLLGNGRVVL 146
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A2R5GZ05_9STRA (Serine/threonine-protein kinase Nek4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZ05_9STRA)

HSP 1 Score: 154 bits (389), Expect = 5.350e-41
Identity = 77/134 (57.46%), Postives = 101/134 (75.37%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVE----KGRIAEAQVLHWFVQAALGLHFMHTNK---VLHRDIKTQNIFLLGNGRLVL 381
            +VY+V+H +E+K Y MK I+L G+ ++ER+A   EV L++ + HPNIV +K+SF  + G  LCIVMT+CDGGDL+ R++    K R  E+Q+LHWFVQ ALGLHFMH      VLHRD+KTQNIFLLGNGRLV+
Sbjct:   17 KVYLVKHKMERKQYCMKTIRLDGVAQNERQACEMEVKLLESMQHPNIVGFKESFKGRSGRMLCIVMTYCDGGDLAGRLQQAAGKRRFKESQILHWFVQLALGLHFMHEMNDKCVLHRDLKTQNIFLLGNGRLVI 150
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A7S3HJZ2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.400e-40
Identity = 71/130 (54.62%), Postives = 100/130 (76.92%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGR---IAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +VY++R  V++    +K+IK++ +P+ EREAT+ EV L++RL HPNIV Y DSF  +  + LCI M +CDGGDL+ +++  R    +E+++LHWFVQ  LGLH+MH NKVLHRD+KTQN+F+LGNGRLVL
Sbjct:   19 KVYLMRDKVKRNFVCVKIIKIKNIPKKEREATKVEVDLLRRLNHPNIVRYIDSFLSKNKESLCICMEYCDGGDLASQIKAARKNLFSESKILHWFVQLTLGLHYMHGNKVLHRDLKTQNVFMLGNGRLVL 148
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BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Match: A0A7S2WHN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHN0_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.690e-40
Identity = 73/130 (56.15%), Postives = 98/130 (75.38%), Query Frame = 1 
Query:    1 QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAYKDSFTVQGGDKLCIVMTFCDGGDLS---KRVEKGRIAEAQVLHWFVQAALGLHFMHTNKVLHRDIKTQNIFLLGNGRLVL 381
            +V+++RH +E+K   +KV++++ LP+ EREA R EV L++RL HPNIV Y  SF  +  + LCIVM +CDGGDL    K  +K    E+++LHWFVQ ALGL +MH N+VLHRD+KTQNIF+LGNGRLVL
Sbjct:   46 KVHLMRHRLERKLVCIKVVRIKNLPKKEREACRMEVELLRRLHHPNIVGYLGSFMHRNNESLCIVMQYCDGGDLCAQIKAAKKQLFPESKILHWFVQMALGLFYMHENRVLHRDLKTQNIFMLGNGRLVL 175
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125070.5084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1CF60_9STRA1.740e-5771.54Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5A8CUE2_CAFRO7.460e-5673.08Protein kinase domain-containing protein n=4 Tax=C... [more]
A0A7S1UB12_9STRA2.250e-4761.54Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2SGK3_9STRA2.320e-4460.61Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D8LPU9_ECTSI2.890e-4360.00Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A7S2MCS7_9STRA3.880e-4260.87Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A836CGE2_9STRA9.610e-4255.38Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A2R5GZ05_9STRA5.350e-4157.46Serine/threonine-protein kinase Nek4 n=1 Tax=Honda... [more]
A0A7S3HJZ2_9STRA1.400e-4054.62Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2WHN0_9STRA4.690e-4056.15Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125070contigM-pyrifera_M_contig125070:3..383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score120.2
Seed ortholog evalue7.2e-25
Seed eggNOG ortholog9365.XP_007521650.1
Preferred nameNEK5
KEGG koko:K08857
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009893,GO:0009987,GO:0010604,GO:0010950,GO:0010952,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019222,GO:0019538,GO:0030162,GO:0031323,GO:0031325,GO:0032268,GO:0032270,GO:0036211,GO:0043085,GO:0043170,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0045595,GO:0045597,GO:0045862,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051147,GO:0051149,GO:0051153,GO:0051155,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051336,GO:0051345,GO:0052547,GO:0052548,GO:0060255,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:2000116,GO:2001056
EggNOG free text desc.Serine threonine-protein kinase Nek5
EggNOG OGs38H8J@33154,3BBDQ@33208,3D1KU@33213,3J8ZF@40674,480I4@7711,490PS@7742,KOG0589@1,KOG0589@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelMammalia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03036,ko03400
Exons1
Model size381
Cds size381
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815767.040266-CDS-M-pyrifera_M_contig125070:2..3831622815767.040266-CDS-M-pyrifera_M_contig125070:2..383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125070 3..383 -
1692277559.7846608-CDS-M-pyrifera_M_contig125070:2..3831692277559.7846608-CDS-M-pyrifera_M_contig125070:2..383Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125070 3..383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125070.5084.1prot_M-pyrifera_M_contig125070.5084.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125070 3..383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125070.5084.1

>prot_M-pyrifera_M_contig125070.5084.1 ID=prot_M-pyrifera_M_contig125070.5084.1|Name=mRNA_M-pyrifera_M_contig125070.5084.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
QVYVVRHVVEKKHYVMKVIKLRGLPRSEREATRNEVTLMQRLPHPNIVAY
KDSFTVQGGDKLCIVMTFCDGGDLSKRVEKGRIAEAQVLHWFVQAALGLH
FMHTNKVLHRDIKTQNIFLLGNGRLVL
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mRNA from alignment at M-pyrifera_M_contig125070:3..383-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125070.5084.1 ID=mRNA_M-pyrifera_M_contig125070.5084.1|Name=mRNA_M-pyrifera_M_contig125070.5084.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=381bp|location=Sequence derived from alignment at M-pyrifera_M_contig125070:3..383- (Macrocystis pyrifera P11B4 male)
CAGGTGTATGTGGTGCGGCACGTTGTGGAGAAGAAGCACTACGTGATGAA
GGTGATCAAGCTGCGAGGGCTGCCCCGTTCGGAGCGTGAGGCGACGCGGA
ACGAGGTGACTCTGATGCAGCGTCTTCCGCACCCGAACATCGTGGCGTAC
AAGGACTCGTTCACGGTGCAGGGCGGGGACAAGCTGTGCATCGTGATGAC
GTTTTGCGACGGCGGAGATTTGTCCAAGCGGGTGGAGAAGGGCCGCATCG
CCGAGGCGCAAGTGCTGCACTGGTTCGTGCAGGCTGCGCTGGGCCTGCAC
TTTATGCACACGAACAAGGTGCTGCATCGGGACATCAAGACGCAGAACAT
CTTCCTTTTGGGCAACGGGCGGCTGGTGCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125070:3..383-

>mRNA_M-pyrifera_M_contig125070.5084.1 ID=mRNA_M-pyrifera_M_contig125070.5084.1|Name=mRNA_M-pyrifera_M_contig125070.5084.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig125070:3..383- (Macrocystis pyrifera P11B4 male)
CAGGTGTATGTGGTGCGGCACGTTGTGGAGAAGAAGCACTACGTGATGAA
GGTGATCAAGCTGCGAGGGCTGCCCCGTTCGGAGCGTGAGGCGACGCGGA
ACGAGGTGACTCTGATGCAGCGTCTTCCGCACCCGAACATCGTGGCGTAC
AAGGACTCGTTCACGGTGCAGGGCGGGGACAAGCTGTGCATCGTGATGAC
GTTTTGCGACGGCGGAGATTTGTCCAAGCGGGTGGAGAAGGGCCGCATCG
CCGAGGCGCAAGTGCTGCACTGGTTCGTGCAGGCTGCGCTGGGCCTGCAC
TTTATGCACACGAACAAGGTGCTGCATCGGGACATCAAGACGCAGAACAT
CTTCCTTTTGGGCAACGGGCGGCTGGTGCTGCAGGTGTATGTGGTGCGGC
ACGTTGTGGAGAAGAAGCACTACGTGATGAAGGTGATCAAGCTGCGAGGG
CTGCCCCGTTCGGAGCGTGAGGCGACGCGGAACGAGGTGACTCTGATGCA
GCGTCTTCCGCACCCGAACATCGTGGCGTACAAGGACTCGTTCACGGTGC
AGGGCGGGGACAAGCTGTGCATCGTGATGACGTTTTGCGACGGCGGAGAT
TTGTCCAAGCGGGTGGAGAAGGGCCGCATCGCCGAGGCGCAAGTGCTGCA
CTGGTTCGTGCAGGCTGCGCTGGGCCTGCACTTTATGCACACGAACAAGG
TGCTGCATCGGGACATCAAGACGCAGAACATCTTCCTTTTGGGCAACGGG
CGGCTGGTGCTG
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