mRNA_M-pyrifera_M_contig125067.5083.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A7X6ARH7_9ACTN (DUF222 domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ARH7_9ACTN) HSP 1 Score: 98.6 bits (244), Expect = 7.230e-23 Identity = 58/140 (41.43%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 1 READRAVARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRDTA 420
READR R +L LP ADAL GA+S HVDTL RA + TS VA S L+ A RPAD D++R + ++A + + +RR ++ GM +L+ EFD + AV+AE +RLF DGGRD A
Sbjct: 69 READRRARRAAVLAELPDAADALAHGALSVEHVDTLGRAVEATSAREVAASGLIDAATRRPADLHAKDGRDWIRRHQTETEVAEQQRRRHAARRLSMWDNVEGMTVLYGEFDPVAGQRIRTAVEAEANRLFHADGGRDGA 208
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A3M2FWL0_ACTSX (Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2FWL0_ACTSX) HSP 1 Score: 85.1 bits (209), Expect = 2.210e-17 Identity = 58/140 (41.43%), Postives = 78/140 (55.71%), Query Frame = 1
Query: 1 READRAVARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLF--TGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
REA RA R Q+L +PAV DAL++G ++ D L AA R +AV E++LL + D R + ++ + AD+ ARL QR RRG TG +GM E D T A+V+ +DAE DRL+R DGGRD
Sbjct: 100 REARRAKKRAQVLGEMPAVTDALSEGRLNVETADVLVEAAGRAGAEAV-ETELLGLVAGEDTDGARRTVERWLTKRETAADVQARLARQRRRRRGWRHRDTG-SGMWRFGFELDSVTGAQVAQVLDAEMDRLWRHDGGRD 237
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A3M2G178_ACTSX (Uncharacterized protein (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G178_ACTSX) HSP 1 Score: 85.1 bits (209), Expect = 5.210e-17 Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 1 READRAVARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHA--EFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
REA RA R +L +PAV DAL++G ++ D L AA R +AV E +LL + + AD R ++ + AD+ ARL QR RRG D+G G+ E D T A+V+ +DAE DRL+R DGGRD
Sbjct: 76 REARRAKKRAAVLGEMPAVTDALSEGRVNVETADVLVEAAARAGTEAV-EGELLGLVTGKDADGARRMAEQWLTKRETAADVEARLARQRRRRRGWRHR-DSGSGMWRFGFELDSVTGAQVAQVLDAEMDRLWRHDGGRD 213
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A3M2GAT5_ACTSX (HNH endonuclease (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GAT5_ACTSX) HSP 1 Score: 77.4 bits (189), Expect = 6.410e-14 Identity = 55/132 (41.67%), Postives = 72/132 (54.55%), Query Frame = 1
Query: 22 ARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGD-NGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
ARG L A+P VADAL DG ++ H D L AA+RT V + +LLA+ D R I +V A+ RL QR R G+ +T + +G H D A V+AA++AETDRL+R DGGRD
Sbjct: 97 ARG--LAAMPRVADALADGRLTVEHADALVAAAERTDAARV-DDELLALVADERVDPARRLIRRWVAAHETRAEAEDRLARQRARRSGRWWTDETDGSTHCHVVLDPVVAAAVTAALEAETDRLWRHDGGRD 225
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A6B1AUQ5_9ACTN (DUF222 domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AUQ5_9ACTN) HSP 1 Score: 75.1 bits (183), Expect = 4.000e-13 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 1
Query: 37 LDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
L +P +A++L DGAI+ H AA +TS + V + +LL +A+ D Q +V D D A QR +R + + D GMG+L AE D T++ +V A++ E DRL+R DGGRD
Sbjct: 82 LTEMPKLAESLADGAITAEHAAVAVAAAAKTSAEQV-DDELLKLAETSSVDVFAQQSRRWVNRNQVD-DGADAHAAQRRNRSVKHWVNDEGMGVLLAELDQTSYQQVQKAINVEYDRLWRDDGGRD 205
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A6B1AZ54_9ACTN (DUF222 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AZ54_9ACTN) HSP 1 Score: 74.3 bits (181), Expect = 7.390e-13 Identity = 47/126 (37.30%), Postives = 69/126 (54.76%), Query Frame = 1
Query: 37 LDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
L +P +A++L DG+I+ H AA +TS + A+ +LL +A+ D Q + T D D A QR +R + + D GMG+L AE D TT+ +V A++ E DRL+R DGGRD
Sbjct: 84 LSKMPKLAESLADGSITVEHASAAVAAASKTSPEQ-ADDELLKLAETSSVDVFAEQSRRWANRTRTD-DGADAYRTQRKNRSLKHWINDQGMGVLLAELDPTTYQQVRKAINVEYDRLWRDDGGRD 207
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A6B1AVW3_9ACTN (DUF222 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AVW3_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 6.860e-11 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 46 LPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
+P +A++L G I+ H AA +TS + A+ +L +A++ D Q + +D D A + QR SR + + ++GMG+L AE D T++ +V AV+AE DRL+R DGGRD
Sbjct: 31 MPKLAESLAAGKITPEHATVAVAAAAKTSAEQ-ADDELFKLAESSSPDMFAQQSRRWANRNQSD-DGAELHQRQRRSRTFKDWVNEDGMGVLLAELDPTSYQQVRKAVNAEYDRLWRDDGGRD 151
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A7K1ZBB7_9ACTN (DUF222 domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBB7_9ACTN) HSP 1 Score: 63.2 bits (152), Expect = 6.470e-9 Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1
Query: 46 LPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
+P +A++L G I+ H AA +TS + V E L +A+ D +V +D D + QR +R + + ++GMG+L AE D T++ V A++AE DRL+R DGGRD
Sbjct: 85 MPKLAESLAGGKITAEHAAVAVGAASKTSAEQVDEQ-LSGIAEGASVDMFAEHSRRWVNRNQSD-DGEELHKRQRRNRCFKDWVNEDGMGVLVAELDPTSYQTVRKAINAEYDRLWRDDGGRD 205
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A6B1B428_9ACTN (DUF222 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B428_9ACTN) HSP 1 Score: 60.8 bits (146), Expect = 4.330e-8 Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 1
Query: 1 READRAVARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRETTADADLAARLEHQRHSRRGQLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLDGGRD 414
R A A L +P +A++L G I+ H AA +TS V E +L +A+ D+ + D D A E +R +R + D GMG++ AE D T++ + A++ E DRL+R DGGRD
Sbjct: 107 RAARSAAVTASGLAEMPKLAESLASGDITAEHAAAAVSAAAKTSPQQV-EDELSKLAEKSSVDSFAKHSRRWANRNQTD-DGADAHETRRRNRSLADWVNDEGMGVILAELDPTSYQQARNAINIEYDRLWRADGGRD 242
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Match: A0A7K2BV06_9ACTN (DUF222 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BV06_9ACTN) HSP 1 Score: 59.3 bits (142), Expect = 1.510e-7 Identity = 52/140 (37.14%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 1 READRAVARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAESDLLAVAKARPADAMRAQINDFVRET---TAD-ADLAARLEHQRHSRRG--QLFTGDNGMGILHAEFDDTTFAEVSAAVDAETDRLFRLD 402
R+A V Q+++A+PAV DA+ G +S A+ LA A ++TS VA D L +AKA+ +MR + FVRE TAD D E++R R +++ GD+GM L EFD T +++ + AE RL +D
Sbjct: 78 RDARSQVKTAQVIEAVPAVRDAVESGRVSQANARRLAEAVEKTSAADVASDDEL-LAKAQ---SMRPE--QFVREARRWTADHQDDGGVSEYRRMRARRCVRIWDGDDGMVHLRGEFDPVTGKRIASRLRAEARRLHDID 211 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125067.5083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125067.5083.1 >prot_M-pyrifera_M_contig125067.5083.1 ID=prot_M-pyrifera_M_contig125067.5083.1|Name=mRNA_M-pyrifera_M_contig125067.5083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp READRAVARGQLLDALPAVADALTDGAISGAHVDTLARAAQRTSVDAVAEback to top mRNA from alignment at M-pyrifera_M_contig125067:83..508+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125067.5083.1 ID=mRNA_M-pyrifera_M_contig125067.5083.1|Name=mRNA_M-pyrifera_M_contig125067.5083.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=426bp|location=Sequence derived from alignment at M-pyrifera_M_contig125067:83..508+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125067:83..508+ >mRNA_M-pyrifera_M_contig125067.5083.1 ID=mRNA_M-pyrifera_M_contig125067.5083.1|Name=mRNA_M-pyrifera_M_contig125067.5083.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig125067:83..508+ (Macrocystis pyrifera P11B4 male)back to top |