mRNA_M-pyrifera_M_contig125046.5078.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig125046.5078.1
Unique NamemRNA_M-pyrifera_M_contig125046.5078.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A0S4TGX2_CRYHO (J domain-containing protein n=5 Tax=Cryptosporidium TaxID=5806 RepID=A0A0S4TGX2_CRYHO)

HSP 1 Score: 101 bits (251), Expect = 1.240e-23
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 1 
Query:   31 YYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDTRGTVDGHTTE------DFDAHFSSAHANDIFMSVFSAHPAF 327
            YY+IL ++ DAS  +I+++YRK+A+KWHPDKNP+  + A E FK+IAEAYEVLS PE+R  YDT G  DG + +       FD HFS  HA+ IF   F  +  F
Sbjct:    3 YYEILEVKRDASTSEIRKSYRKLALKWHPDKNPDNREEAEEMFKKIAEAYEVLSDPEKRNRYDTYG-ADGVSADFSSDFHGFDRHFSMGHASRIFEEFFGTNNIF 106
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A7S3D1S9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D1S9_9EUKA)

HSP 1 Score: 94.7 bits (234), Expect = 1.680e-22
Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 1 
Query:   34 YDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDTRGTVDGHTTEDFDAHFSSAH 282
            Y ILGI  +ASE DIK+AY+KMA+KWHPDKN    + A  +FK I EAYE+L  PE+RR YD RG  DGHT +DF A  S  H
Sbjct:    7 YGILGISSNASEADIKKAYKKMALKWHPDKNQGNKEEAERRFKEIGEAYEILKDPEKRRRYD-RGDFDGHTDDDFFASASGGH 88
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A6M2VHX9_STIJA (DNAJB6L n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A6M2VHX9_STIJA)

HSP 1 Score: 93.6 bits (231), Expect = 6.380e-22
Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1 
Query:   31 YYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDTRGT------VDGHTTEDFDA-----HFSSAHANDIFMSVFSAHPAF 327
            YYD+LG+ +DAS+ +IKR+YRK+A+KWHPDKNP  A+ AA  FK + EAYEVLS  E+R+ YD  G        +G TT DF       HF      DIF   F  +  F
Sbjct:    4 YYDLLGVEKDASQEEIKRSYRKLALKWHPDKNPNNAEEAAVMFKEVCEAYEVLSDKEKRKSYDLYGPEGLKNGANG-TTYDFGGFEPFHHFEFRRPEDIFREFFGTYDPF 112
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: G1KEN3_ANOCA (J domain-containing protein n=1 Tax=Anolis carolinensis TaxID=28377 RepID=G1KEN3_ANOCA)

HSP 1 Score: 93.2 bits (230), Expect = 7.100e-22
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 1 
Query:   31 YYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDT---------RGTVDGHTTEDFDAHFSSAHANDIFMSVFSAHPAF 327
            YY++LG+ ++AS+ DIK+AYRK+A+KWHPDKNP   + A ++FK +AEAYEVLS P +R  YD          RGT  GH+   FD  F      +IF   F     F
Sbjct:    4 YYEVLGLHQNASQEDIKKAYRKLALKWHPDKNPYNKEEAEKKFKAVAEAYEVLSDPMKRSVYDRPPKEPRYRGRGTAGGHSHSPFDFDFVFRSPEEIFREFFGGMDIF 111
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A670IZ49_PODMU (DnaJ heat shock protein family (Hsp40) member B8 n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670IZ49_PODMU)

HSP 1 Score: 93.6 bits (231), Expect = 7.660e-22
Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 1 
Query:   31 YYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDT---------RGTVDGHTTEDFDAHFSSAHANDIFMSVFSAHPAF 327
            YY++LG+ ++AS+ DIKRAYRK+A+KWHPDKNP   + A ++FK +AEAYEVLS P++R  YD          RG   GH+   FD  F     ++IF   F     F
Sbjct:    4 YYEVLGLHQNASQEDIKRAYRKLALKWHPDKNPYHKEEAEKKFKAVAEAYEVLSDPQKRALYDRPVKEPRFRGRGASGGHSRSPFDFDFVFRSPDEIFREFFGGMDIF 111
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A426ZNM1_ENSVE (J domain-containing protein n=2 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZNM1_ENSVE)

HSP 1 Score: 94.7 bits (234), Expect = 1.380e-21
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 1 
Query:    1 GMSQAEEGETYYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDTRGT-------VDGHTTEDFDAHFSSAHANDIFMSVFSAHPAFYSMLGLA 348
            G+     G  YY+IL + ++ASE D+K+AYRK+AMKWHPDKNP   + A  +FK+I+EAYEVLS P++R  YD  G          G +    D HF+  +A DIF   F + P  +  +G A
Sbjct:   24 GIDGQRMGVDYYNILKVGKNASEEDLKKAYRKLAMKWHPDKNPTNKKEAEAKFKKISEAYEVLSDPQKRGVYDQYGEDGLKGMPPPGSSGGPNDVHFNPRNAEDIFAEFFGSSPFGFGSMGRA 146
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BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A443N339_9MAGN (DnaJ subfamily B member 4 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443N339_9MAGN)

HSP 1 Score: 96.7 bits (239), Expect = 1.660e-21
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:   22 GETYYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDTRGTVDGHTTEDFDAHFSSAHANDIFMSVFSAHPAFYSMLGLA 348
            G  YY IL +  +A++ D+K++YRK+AMKWHPDKNP   Q A  +FK I+EAYEVLS P++R  YD  G  +G      D +F+  +A DIF   F + P  +S +G A
Sbjct:    2 GVDYYGILEVSRNATDEDVKKSYRKLAMKWHPDKNPNNKQEAEAKFKEISEAYEVLSDPQKRALYDQYGEENGKPGGPNDFNFNHRNAEDIFTEFFGSSPFEFSSMGRA 110
[Close]
BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A7S3D2H8_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D2H8_9EUKA)

HSP 1 Score: 94.7 bits (234), Expect = 1.880e-21
Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 1 
Query:   34 YDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDTRGTVDGHTTEDFDAHFSSAH 282
            Y ILGI  +ASE DIK+AY+KMA+KWHPDKN    + A  +FK I EAYE+L  PE+RR YD RG  DGHT +DF A  S  H
Sbjct:    7 YGILGISSNASEADIKKAYKKMALKWHPDKNQGNKEEAERRFKEIGEAYEILKDPEKRRRYD-RGDFDGHTDDDFFASASGGH 88
[Close]
BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: UPI0015910B1D (dnaJ homolog subfamily B member 6-like n=3 Tax=Lacertinae TaxID=162266 RepID=UPI0015910B1D)

HSP 1 Score: 93.6 bits (231), Expect = 4.360e-21
Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 1 
Query:   31 YYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDT---------RGTVDGHTTEDFDAHFSSAHANDIFMSVFSAHPAF 327
            YY++LG+ ++AS+ DIKRAYRK+A+KWHPDKNP   + A ++FK +AEAYEVLS P++R  YD          RG   GH+   FD  F     ++IF   F     F
Sbjct:    4 YYEVLGLHQNASQEDIKRAYRKLALKWHPDKNPYHKEEAEKKFKAVAEAYEVLSDPQKRALYDRPVKEPRFRGRGASGGHSRSPFDFDFVFRSPDEIFREFFGGMDIF 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Match: A0A8C0GBK4_CHEAB (DnaJ heat shock protein family (Hsp40) member B8 n=3 Tax=Testudinoidea TaxID=8486 RepID=A0A8C0GBK4_CHEAB)

HSP 1 Score: 90.9 bits (224), Expect = 4.870e-21
Identity = 47/109 (43.12%), Postives = 66/109 (60.55%), Query Frame = 1 
Query:   31 YYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAEQFKRIAEAYEVLSSPERRREYDT----------RGTVDGHTTEDFDAHFSSAHANDIFMSVFSAHPAF 327
            YY++LG+ + AS+ DIK++YRK+A+KWHPDKNP   + A ++FK IAEAYEVLS P++R  YD           RG   GH    FD+ +   +  +IF   F+    F
Sbjct:    4 YYEVLGLHQKASQDDIKKSYRKLALKWHPDKNPNNKEEAEKKFKAIAEAYEVLSDPQKRSIYDRSGKESRQRGGRGATGGHFHSPFDSEYIFRNPEEIFREFFAGMDPF 112
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125046.5078.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S4TGX2_CRYHO1.240e-2350.48J domain-containing protein n=5 Tax=Cryptosporidiu... [more]
A0A7S3D1S9_9EUKA1.680e-2259.04Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A6M2VHX9_STIJA6.380e-2247.27DNAJB6L n=2 Tax=Stichopus japonicus TaxID=307972 R... [more]
G1KEN3_ANOCA7.100e-2245.37J domain-containing protein n=1 Tax=Anolis carolin... [more]
A0A670IZ49_PODMU7.660e-2245.37DnaJ heat shock protein family (Hsp40) member B8 n... [more]
A0A426ZNM1_ENSVE1.380e-2143.09J domain-containing protein n=2 Tax=Ensete ventric... [more]
A0A443N339_9MAGN1.660e-2145.87DnaJ subfamily B member 4 n=1 Tax=Cinnamomum micra... [more]
A0A7S3D2H8_9EUKA1.880e-2159.04Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
UPI0015910B1D4.360e-2145.37dnaJ homolog subfamily B member 6-like n=3 Tax=Lac... [more]
A0A8C0GBK4_CHEAB4.870e-2143.12DnaJ heat shock protein family (Hsp40) member B8 n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125046contigM-pyrifera_M_contig125046:36..410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeApicomplexa
Seed ortholog score94.7
Seed ortholog evalue3.1e-17
Seed eggNOG ortholog5825.PCHAS_061160
KEGG koko:K09512
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006457,GO:0006458,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0019538,GO:0022607,GO:0030163,GO:0030176,GO:0030544,GO:0031072,GO:0031224,GO:0031227,GO:0031984,GO:0033554,GO:0034622,GO:0034976,GO:0035966,GO:0035967,GO:0036503,GO:0042175,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051084,GO:0051085,GO:0051603,GO:0051716,GO:0051788,GO:0061077,GO:0065003,GO:0070887,GO:0071218,GO:0071310,GO:0071704,GO:0071840,GO:0098827,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.DnaJ molecular chaperone homology domain
EggNOG OGs3KAVJ@422676,3YAIU@5794,3YZ6P@5819,COG0484@1,KOG0714@2759
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 orthologEc-15_002850.1
COG Functional cat.O
Best tax levelHaemosporida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Exons1
Model size375
Cds size372
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815766.7634187-UTR-M-pyrifera_M_contig125046:35..381622815766.7634187-UTR-M-pyrifera_M_contig125046:35..38Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig125046 36..38 +
1692277559.6410542-UTR-M-pyrifera_M_contig125046:35..381692277559.6410542-UTR-M-pyrifera_M_contig125046:35..38Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig125046 36..38 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815766.7753966-CDS-M-pyrifera_M_contig125046:38..4101622815766.7753966-CDS-M-pyrifera_M_contig125046:38..410Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125046 39..410 +
1692277559.653934-CDS-M-pyrifera_M_contig125046:38..4101692277559.653934-CDS-M-pyrifera_M_contig125046:38..410Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig125046 39..410 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125046.5078.1prot_M-pyrifera_M_contig125046.5078.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig125046 39..410 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig125046.5078.1

>prot_M-pyrifera_M_contig125046.5078.1 ID=prot_M-pyrifera_M_contig125046.5078.1|Name=mRNA_M-pyrifera_M_contig125046.5078.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
MSQAEEGETYYDILGIREDASERDIKRAYRKMAMKWHPDKNPERAQWAAE
QFKRIAEAYEVLSSPERRREYDTRGTVDGHTTEDFDAHFSSAHANDIFMS
VFSAHPAFYSMLGLAPPKRSAPFG
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mRNA from alignment at M-pyrifera_M_contig125046:36..410+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig125046.5078.1 ID=mRNA_M-pyrifera_M_contig125046.5078.1|Name=mRNA_M-pyrifera_M_contig125046.5078.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig125046:36..410+ (Macrocystis pyrifera P11B4 male)
GGCATGTCGCAAGCAGAAGAAGGTGAGACGTACTATGACATTCTTGGCAT
CAGGGAGGATGCGTCAGAGCGCGACATCAAGCGTGCCTACCGGAAAATGG
CGATGAAATGGCATCCTGATAAGAACCCCGAACGGGCACAGTGGGCAGCA
GAGCAGTTCAAGCGCATCGCAGAGGCGTACGAGGTGCTGAGCAGTCCCGA
GCGTCGTAGAGAGTACGACACGCGGGGCACTGTGGACGGCCATACGACTG
AGGACTTTGACGCGCACTTTTCGTCTGCGCATGCCAACGACATCTTCATG
TCCGTCTTTTCTGCCCACCCGGCATTCTATTCCATGCTGGGACTCGCCCC
ACCCAAGAGAAGTGCACCATTCGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig125046:36..410+

>mRNA_M-pyrifera_M_contig125046.5078.1 ID=mRNA_M-pyrifera_M_contig125046.5078.1|Name=mRNA_M-pyrifera_M_contig125046.5078.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig125046:36..410+ (Macrocystis pyrifera P11B4 male)
ATGTCGCAAGCAGAAGAAGGTGAGACGTACTATGACATTCTTGGCATCAG
GGAGGATGCGTCAGAGCGCGACATCAAGCGTGCCTACCGGAAAATGGCGA
TGAAATGGCATCCTGATAAGAACCCCGAACGGGCACAGTGGGCAGCAGAG
CAGTTCAAGCGCATCGCAGAGGCGTACGAGGTGCTGAGCAGTCCCGAGCG
TCGTAGAGAGTACGACACGCGGGGCACTGTGGACGGCCATACGACTGAGG
ACTTTGACGCGCACTTTTCGTCTGCGCATGCCAACGACATCTTCATGTCC
GTCTTTTCTGCCCACCCGGCATTCTATTCCATGCTGGGACTCGCCCCACC
CAAGAGAAGTGCACCATTCGGCATGTCGCAAGCAGAAGAAGGTGAGACGT
ACTATGACATTCTTGGCATCAGGGAGGATGCGTCAGAGCGCGACATCAAG
CGTGCCTACCGGAAAATGGCGATGAAATGGCATCCTGATAAGAACCCCGA
ACGGGCACAGTGGGCAGCAGAGCAGTTCAAGCGCATCGCAGAGGCGTACG
AGGTGCTGAGCAGTCCCGAGCGTCGTAGAGAGTACGACACGCGGGGCACT
GTGGACGGCCATACGACTGAGGACTTTGACGCGCACTTTTCGTCTGCGCA
TGCCAACGACATCTTCATGTCCGTCTTTTCTGCCCACCCGGCATTCTATT
CCATGCTGGGACTCGCCCCACCCAAGAGAAGTGCACCATTCGGC
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