mRNA_M-pyrifera_M_contig124911.5065.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A7X6ASM6_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ASM6_9ACTN) HSP 1 Score: 179 bits (454), Expect = 4.360e-54 Identity = 87/151 (57.62%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 1 DVIDVEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPLAATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGDGAAFAVGVRVHGEVLIADRAYEIEATGVRRR 453
DV+++ FV + +L GLVR+D R AGATR L +++R GE V V DHELP+ +FE RAP VWVEL CETPLDHWT+GLEAFGL L EV +P S G+RVP+GLDLDLDT + P G F + VRVHG+VL+AD Y I+ G R R
Sbjct: 19 DVVELHFVTETAALGGLVRLDVRGAAGATRLLVAVVRSGEPNVVVVDHELPVPRHSFELRAPGVWVELGCETPLDHWTVGLEAFGLVLDRGEVASPVSRGERVPVGLDLDLDTTAPPARTGDGFHLPVRVHGDVLVADARYGIDTQGTRFR 169
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A3C0HMQ3_9ACTN (Uncharacterized protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HMQ3_9ACTN) HSP 1 Score: 165 bits (418), Expect = 9.970e-49 Identity = 78/151 (51.66%), Postives = 104/151 (68.87%), Query Frame = 1
Query: 1 DVIDVEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPLAATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGDGAAFAVGVRVHGEVLIADRAYEIEATGVRRR 453
D ID+E+V ++AGL+R+ R AGAT FLA + GE+PV V D+ELPL + AFEFRAP +W + CETP++ WTIGLEAFG+A+ +V+ P + GDR P+GLDLD++ SAP+ F V V GEVL+ YE++A GVRRR
Sbjct: 18 DTIDIEWVDKRQAVAGLLRVSVRPSAGATWFLAVVHEQGEDPVVVLDYELPLVSHAFEFRAPGIWTDFVCETPIEQWTIGLEAFGIAVDPDDVIHPATFGDRTPIGLDLDVEAASAPDEHDDGFEHEVTVRGEVLLGSATYEVDAVGVRRR 168
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A2E8L9G9_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L9G9_9ACTN) HSP 1 Score: 110 bits (274), Expect = 2.540e-28 Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 DVIDVEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPLAATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEV 279
D ID+E+V ++AGL+R+ R AGAT FLA + GE+PV V D+ELPL + AFEFRAP +W + CETP++ WT+GLEAFG+A+ +V
Sbjct: 18 DTIDIEWVDKRQAIAGLLRVSVRPSAGATWFLAVVHEQGEDPVVVLDYELPLVSHAFEFRAPGIWTDFVCETPIEQWTVGLEAFGVAVDPDDV 110
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A6J4HWG1_9ACTN (Uncharacterized protein n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4HWG1_9ACTN) HSP 1 Score: 105 bits (261), Expect = 1.490e-24 Identity = 58/149 (38.93%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 13 VEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPL-AATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTIS---APEGDGAAFAVGVRVHGEVLIADRAYEIEATGVR 447
++FVA D LAG V++ R G F A ++ G VTV DHE+P+ E RA +W EL CETPLDHW++GLEAFG+AL + GD LGLD++ + + A G + G VHG+VL+ + ++ +G R
Sbjct: 28 LDFVAGDGRLAGYVKLTLRPGEGTAWFWAGMVGGGPTLVTVRDHEVPMPTGRGLEVRASGLWTELVCETPLDHWSVGLEAFGVALDDPLEAWGRERGDPWALGLDVEWEATAPCVAWPGPERGYWQGCNVHGDVLVGAERFSLDGSGTR 176
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A2E6ZE22_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E6ZE22_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 2.590e-21 Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 1
Query: 16 EFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHEL--PLAATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGDGAAFAVGVRVHGEVLIADRAYEIEATGVRRRA 456
+F + D L G V ++ + ++A++L V V D + L + EFRA +W + CETPL HWT+GLEAFG+ L E E D G R+ +GLDL+ + + P+ + F+ V GEVLI D ++EI + G R R+
Sbjct: 23 DFWSPDCDLGGWVHFAYDSESRSGWYVAALLGAQRPLVLVVDPHIRIELLSPYLEFRAEGIWAQHVCETPLRHWTVGLEAFGVTLDEIEDAMGDQWGTRIGVGLDLEWEYAAEPQENDEGFSQKCFVTGEVLIDDMSFEINSKGNRTRS 171
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A7Y2GKM3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKM3_9ACTN) HSP 1 Score: 94.4 bits (233), Expect = 2.930e-20 Identity = 54/153 (35.29%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 13 VEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPL-AATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPE-SEVVTPDS----HGDRVPLGLDLDLDTISAPEGDGAA--FAVGVRVHGEVLIADRAYEIEATGVR 447
++F A D SL G +R+ + G + + A ++ P + V V ++ PL + E R +W ++ ETPLDH ++GLEAFG+ L + +E T D GDR P+G +LD DT P G + + RVHGE+L+ D + E G R
Sbjct: 29 LDFFAPDGSLGGYIRMGLYPNLGVSWYWACLVGPDRQLVMVVENHAPLPSGPGLELRTDGLWQDIVVETPLDHVSVGLEAFGVGLDDPAEAYTVDPVGALWGDRTPIGFELDWDTAGQPYGYPVTSRYEIPCRVHGEILVGDEVIDFEGFGQR 181
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A538FBW7_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538FBW7_9ACTN) HSP 1 Score: 93.6 bits (231), Expect = 3.390e-20 Identity = 59/158 (37.34%), Postives = 80/158 (50.63%), Query Frame = 1
Query: 10 DVEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPLA-ATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGD---------GAAFAVGVRVHGEVLIADRAYEIEATGVRRR 453
++ F A D SLAG VR+ A + A ++ G V D E+ L A E RA +W L CETPL+HW++GLEAF +AL + + + GDR+P+GLDL+ + AP D G + VHGEVLI +E G R R
Sbjct: 23 ELVFWAQDSSLAGSVRLTLVPGAQRAWYWADLVGAGRPLVAARDDEVDLPRGRALEVRAEGLWSVLTCETPLEHWSVGLEAFAVALDDPDEALGQARGDRLPMGLDLEWEA-DAPARDTDPLGLRAGGRRYEQPALVHGEVLIGSERVALECPGWRVR 179
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A2E7A5N2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E7A5N2_9ACTN) HSP 1 Score: 90.5 bits (223), Expect = 1.650e-19 Identity = 50/149 (33.56%), Postives = 79/149 (53.02%), Query Frame = 1
Query: 16 EFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPLAATA--FEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGDGAAFAVGVRVHGEVLIADRAYEIEATGVRRRA 456
+F + + L G V + + ++A++L + V V D ++P+ + EFRA +W + CETPL+HWT+GLEAFG+ L +E + G R +GLDL+ + I E F V GEVLI ++A+ + G R R+
Sbjct: 24 DFWSAEYDLGGWVHFTYDQSSRKAWYVAALLGVDRQLVLVVDPKIPIPQLSQYLEFRAEGIWAQHVCETPLEHWTVGLEAFGVTLETAEDAMGNQWGKRTGVGLDLEWERIEDTEETVTGFRQRCSVSGEVLIDEQAFGLHVDGWRSRS 172
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: A0A358D1J8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358D1J8_9ACTN) HSP 1 Score: 90.1 bits (222), Expect = 2.180e-19 Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 1
Query: 16 EFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELPLAATA--FEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGDGAAFAVGVRVHGEVLIADRAYEIEATGVRRRAGAMLRTP 477
+F + + L G V + + ++A++L V V D ++ + + EFRA +W + CETP+ HWTIGLEAFG+ L + E D G R +GLDL+ + + P+ F+ V+GEVLI D ++E+ + G R R + + P
Sbjct: 23 DFWSPNHDLGGWVHFTYDSASRSGWYVAALLGSERPLVLVVDPQVRIEELSPYLEFRAEGIWAQHVCETPMQHWTIGLEAFGVTLDQPEDAMGDQWGIRTGVGLDLEWEHAAEPQQTENGFSQDCFVNGEVLIDDMSFEVASKGTRSRMWSAINPP 178
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Match: UPI001AA0A53B (hypothetical protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0A53B) HSP 1 Score: 90.9 bits (224), Expect = 5.600e-19 Identity = 55/158 (34.81%), Postives = 78/158 (49.37%), Query Frame = 1
Query: 16 EFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHEL--PLAATAFEFRAPAVWVELCCETPLDHWTIGLEAFGLALPESEVVTPDSHGDRVPLGLDLDLDTISAPEGDGAAFA---------VGVRVHGEVLIADRAYEIEATGVRRRA 456
+F + D S+ G VR+ + G + A + P V V DHE+ P+ + E RA +W + CETP +HW++GLEA ++L + S G VPLG DL+ +T DG FA V RVHGEVL+ E++ G R A
Sbjct: 30 DFASPDGSVGGYVRVGRYPNLGVVWYWACLAGPRRPAVMVIDHEVRPPVREGSLELRASGLWADHNCETPFEHWSVGLEASAVSLDDPLDAYRGSLGQPVPLGFDLEWET------DGEVFAHPPPLDGYEVPCRVHGEVLVGRERLELDGVGQRNHA 181 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124911.5065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124911.5065.1 >prot_M-pyrifera_M_contig124911.5065.1 ID=prot_M-pyrifera_M_contig124911.5065.1|Name=mRNA_M-pyrifera_M_contig124911.5065.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp DVIDVEFVADDLSLAGLVRIDTRRDAGATRFLASILRPGEEPVTVFDHELback to top mRNA from alignment at M-pyrifera_M_contig124911:35..511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124911.5065.1 ID=mRNA_M-pyrifera_M_contig124911.5065.1|Name=mRNA_M-pyrifera_M_contig124911.5065.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=477bp|location=Sequence derived from alignment at M-pyrifera_M_contig124911:35..511+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124911:35..511+ >mRNA_M-pyrifera_M_contig124911.5065.1 ID=mRNA_M-pyrifera_M_contig124911.5065.1|Name=mRNA_M-pyrifera_M_contig124911.5065.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=954bp|location=Sequence derived from alignment at M-pyrifera_M_contig124911:35..511+ (Macrocystis pyrifera P11B4 male)back to top |