mRNA_M-pyrifera_M_contig124826.5044.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: UPI00145A51B1 (lycopene beta-cyclase CrtY n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI00145A51B1) HSP 1 Score: 246 bits (627), Expect = 4.960e-78 Identity = 120/172 (69.77%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
G+ +EL RPHGE VPTIMDAAV ++DGYRF YVLPLSPTR+LIEDTRYSD G LDFEALHSDVLAYAANR WV+K+ R+EKGILP+ LAHD FW + +AP+GLRA L HPTTGYSLP+AVE ANLIA L PLTT VR+A++ YA+ RN++ AF+R LNRMLF A
Sbjct: 147 GVEVELGRPHGEDVPTIMDAAVDQKDGYRFFYVLPLSPTRVLIEDTRYSDDGSLDFEALHSDVLAYAANRGWVVKQLKRTEKGILPIALAHDVLAFWDRVPLHSAPIGLRAALFHPTTGYSLPIAVETANLIAGLGRPLTTAAVRKAIYAYALNRNQEQAFYRFLNRMLFRA 318
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: UPI001F012545 (lycopene beta-cyclase CrtY n=1 Tax=Devosia sp. SL43 TaxID=2806348 RepID=UPI001F012545) HSP 1 Score: 195 bits (496), Expect = 3.830e-58 Identity = 96/172 (55.81%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +E ++PHG P IMDA+V ++DGYRF Y+LP SPTR+LIEDTRYSDG LD +AL +DV AYA + W I + +R E G+LP+ LAHDAERFW D G+RA L HPTTGYSLP AV VANL+A+ P+ + ++ + D+A+ RNR F+RLLNRMLF A
Sbjct: 162 GLEIETEQPHGLVNPVIMDASVDQRDGYRFVYLLPFSPTRVLIEDTRYSDGEALDLQALAADVSAYATAQGWSIARVVREEHGVLPIALAHDAERFWSSKPRDVPQAGMRAALFHPTTGYSLPEAVRVANLVASAW-PIGSAELAPRIRDHAVTRNRQQRFYRLLNRMLFRA 332
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: A0A4P7HJI9_9RHOB (Lycopene beta-cyclase CrtY n=6 Tax=Paracoccus TaxID=265 RepID=A0A4P7HJI9_9RHOB) HSP 1 Score: 194 bits (493), Expect = 2.130e-57 Identity = 97/170 (57.06%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLF 510
G+ +E D PHG P IMD V++QDGYRF Y+LP SPTR+LIEDTRYSDGGDLD EAL YA ++ W +R E+GILP+ LAHDA+ FW A P+GLRAG HP TGYSLP A VA+++AAL PLTT ++R A+ D+A+ R R F RLLNRMLF
Sbjct: 191 GIEIETDAPHGVTRPLIMDGTVTQQDGYRFIYLLPFSPTRILIEDTRYSDGGDLDDEALAQASHDYARDKGWT-GTEMRRERGILPIALAHDAQGFWDDHASGAVPVGLRAGFFHPVTGYSLPYAARVADVVAALPGPLTTDRLRPALRDFALDRARQDRFLRLLNRMLF 359
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: A0A0F5L7L4_9HYPH (Uncharacterized protein n=2 Tax=Devosia soli TaxID=361041 RepID=A0A0F5L7L4_9HYPH) HSP 1 Score: 192 bits (487), Expect = 6.980e-57 Identity = 94/172 (54.65%), Postives = 120/172 (69.77%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +EL+ PHG P IMDA+V ++DGYRF Y+LP SPTR+LIEDTRYSDG LD +AL D+ YA + W I++ +R E G+LP+ LAHD ERFW D G+RAGL HPTTGYSLP AV +ANL+A P ++ + A+ D+A R+R+ F+RLLNRMLF A
Sbjct: 154 GLEVELEEPHGLSDPVIMDASVDQRDGYRFIYLLPFSPTRVLIEDTRYSDGEALDLQALAGDIARYAEAQGWSIRQVVREENGVLPIALAHDFERFWADKPVDIPQAGMRAGLFHPTTGYSLPEAVRIANLVAG-NWPASSVTLARAIRDHARMRHREQGFYRLLNRMLFRA 324
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: A0A433XF82_9HYPH (Lycopene cyclase n=1 Tax=Arsenicitalea aurantiaca TaxID=1783274 RepID=A0A433XF82_9HYPH) HSP 1 Score: 192 bits (487), Expect = 9.160e-57 Identity = 95/172 (55.23%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +E + PHG VP IMDA+V ++DGYRF Y+LP SPTRLLIEDTRY+DG LD +AL D+ YAA R W +K +R E G+LP+ LA DAE FWR PD G+RAGL HPTTGYSLP AV VAN++A P + + + ++A+ R R +F+RLLNRMLF A
Sbjct: 165 GLEIETETPHGISVPMIMDASVDQKDGYRFVYLLPFSPTRLLIEDTRYADGEALDLQALAGDISEYAAARGWEVKSVVREEHGVLPIALAFDAEAFWRDAPPDVPQAGMRAGLFHPTTGYSLPEAVRVANVVAD-SWPTGSAALAGRIREHALGRARAQSFYRLLNRMLFRA 335
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: CRTY_PARSN (Lycopene beta-cyclase n=10 Tax=Paracoccus TaxID=265 RepID=CRTY_PARSN) HSP 1 Score: 191 bits (485), Expect = 1.320e-56 Identity = 97/170 (57.06%), Postives = 116/170 (68.24%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLF 510
G+ +E DRPHG P IMDA V++QDGYRF Y+LP SPTR+LIEDTRYSDGGDLD +AL + YA + W +R E+GILP+ LAHDA FW A P+GLRAG HP TGYSLP A +VA+++A L P T +R A+ DYAI R R F RLLNRMLF
Sbjct: 153 GVEIETDRPHGVPRPMIMDATVTQQDGYRFIYLLPFSPTRILIEDTRYSDGGDLDDDALAAASHDYARQQGWT-GAEVRRERGILPIALAHDAAGFWADHAAGPVPVGLRAGFFHPVTGYSLPYAAQVADVVAGLSGPPGTDALRGAIRDYAIDRARRDRFLRLLNRMLF 321
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: A0A4R5UGH6_9HYPH (Lycopene beta-cyclase CrtY n=1 Tax=Rhizobium deserti TaxID=2547961 RepID=A0A4R5UGH6_9HYPH) HSP 1 Score: 190 bits (482), Expect = 4.210e-56 Identity = 100/172 (58.14%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +EL +PH P IMDA+V ++DGYRF YVLPLSPTRLLIEDTRYSD +LD AL DV YA+ + W I + IR E+G+LP+TLAHD ERFW + D GLRAGL HPTTGYSLP AV +ANLIAA + P + + + YA R H F+RLLNRMLF A
Sbjct: 157 GLEVELRQPHALIDPVIMDASVDQRDGYRFLYVLPLSPTRLLIEDTRYSDDRNLDETALAEDVRDYASAQHWTIDRIIRRERGVLPITLAHDFERFWSELPTDVPQAGLRAGLFHPTTGYSLPEAVRLANLIAA-RWPSNSATLAGIIRQYASAHYRRHGFYRLLNRMLFRA 327
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: A0A1K2HSZ0_9HYPH (Lycopene beta-cyclase n=1 Tax=Devosia enhydra TaxID=665118 RepID=A0A1K2HSZ0_9HYPH) HSP 1 Score: 189 bits (480), Expect = 9.700e-56 Identity = 91/172 (52.91%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +E PHG VP IMDA+V ++DGYRF Y+LP SPTR+LIEDTRY+DG LD +AL +D+ AYA + W ++ +R E G+LP+ LA DAERFW D G+RAGL HPTTGYSLP AV +ANL+A P + + E + +A++R +D +F+R LNRMLF A
Sbjct: 158 GLEIETTEPHGVDVPMIMDASVDQKDGYRFVYLLPFSPTRILIEDTRYADGEALDMQALAADISAYAEAKGWTLRTVVREEHGVLPIALAFDAERFWADAPKDIPQAGMRAGLFHPTTGYSLPEAVRIANLVAE-SWPAGSAALAERIRRHALKRAKDQSFYRFLNRMLFKA 328
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: UPI001C6DF6C9 (lycopene beta-cyclase CrtY n=1 Tax=Rhizobium wenxiniae TaxID=1737357 RepID=UPI001C6DF6C9) HSP 1 Score: 189 bits (481), Expect = 1.400e-55 Identity = 97/172 (56.40%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +EL PHG P IMDA V + DGYRF Y+LP+SPTR+LIEDTRYS+G DLD AL D+ AYA + W I++ +R E G+LP+ LAHD ERFW + D A GLRAGL HPTTGYSLP AV VA+LIA P+ T + + +A R++R F+RLLNRMLF A
Sbjct: 193 GLEVELSEPHGLPHPVIMDATVEQLDGYRFVYLLPVSPTRVLIEDTRYSEGADLDGAALSEDIHAYANSHGWNIQRVVRRENGVLPIVLAHDFERFWSELPVDIAHAGLRAGLFHPTTGYSLPDAVHVADLIAE-NWPIGTAALAAVIRRHAARQHRKQGFYRLLNRMLFLA 363
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Match: UPI00115A327E (lycopene beta-cyclase CrtY n=1 Tax=Pseudorhizobium halotolerans TaxID=1233081 RepID=UPI00115A327E) HSP 1 Score: 187 bits (476), Expect = 3.320e-55 Identity = 94/172 (54.65%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 1 GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDGGDLDFEALHSDVLAYAANRAWVIKKSIRSEKGILPVTLAHDAERFWRGIAPDTAPLGLRAGLCHPTTGYSLPMAVEVANLIAALKAPLTTHQVREAVHDYAIRRNRDHAFFRLLNRMLFGA 516
GL +EL + HG P IMDA V + DGYRF Y+LPLS TR+LIEDTRYSDG DLD AL D+LAYA+ + W +++ IR+E G+LP+ LAHD ERFW + D G+RAGL HPTTGYSLP AV +AN+IA + P + + A+ +A ++R+ F+RLLNRMLF A
Sbjct: 157 GLEVELGQTHGLASPVIMDATVDQHDGYRFVYLLPLSETRVLIEDTRYSDGPDLDDVALERDILAYASAQGWSVRRIIRTEHGVLPIALAHDFERFWSELPSDIPQAGMRAGLFHPTTGYSLPDAVRLANVIAD-RWPSNSSDLARAIRQHAAAQHRNQRFYRLLNRMLFLA 327 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124826.5044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124826.5044.1 >prot_M-pyrifera_M_contig124826.5044.1 ID=prot_M-pyrifera_M_contig124826.5044.1|Name=mRNA_M-pyrifera_M_contig124826.5044.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp GLGLELDRPHGEKVPTIMDAAVSRQDGYRFTYVLPLSPTRLLIEDTRYSDback to top mRNA from alignment at M-pyrifera_M_contig124826:1..516- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124826.5044.1 ID=mRNA_M-pyrifera_M_contig124826.5044.1|Name=mRNA_M-pyrifera_M_contig124826.5044.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig124826:1..516- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124826:1..516- >mRNA_M-pyrifera_M_contig124826.5044.1 ID=mRNA_M-pyrifera_M_contig124826.5044.1|Name=mRNA_M-pyrifera_M_contig124826.5044.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig124826:1..516- (Macrocystis pyrifera P11B4 male)back to top |