mRNA_M-pyrifera_M_contig124701.5029.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A2E7K9G4_9PLAN (Chromosome partitioning protein ParB n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K9G4_9PLAN) HSP 1 Score: 214 bits (544), Expect = 3.660e-70 Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDSIY 309
YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDS YPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDSIY
Sbjct: 20 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSEYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDSIY 122
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A518FX51_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518FX51_9PLAN) HSP 1 Score: 186 bits (473), Expect = 2.460e-59 Identity = 87/103 (84.47%), Postives = 94/103 (91.26%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDSIY 309
YTERLW+LA LPVITIE+ESLKHLDGVCWFDDDFPPTLRNVVEHF+RME VD +PIIL PDGQLFDGAHRVAK L+ G++TIQAVKL ELPPPDEIVDSIY
Sbjct: 20 YTERLWELARNLPVITIELESLKHLDGVCWFDDDFPPTLRNVVEHFVRMEQVDLDFPIILAPDGQLFDGAHRVAKRLASGQSTIQAVKLHELPPPDEIVDSIY 122
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: UPI00118D02FA (hypothetical protein n=1 Tax=Gimesia maris TaxID=122 RepID=UPI00118D02FA) HSP 1 Score: 144 bits (364), Expect = 1.130e-42 Identity = 66/101 (65.35%), Postives = 82/101 (81.19%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDS 303
+ E LW+ PVI +EI+SLKH+D VCWFDD P TLRNVV HF RME D+ YPI+LDPDGQLFDGAHRVAKAL++G++TI+AV+L ++PPPDEIV +
Sbjct: 21 HLEPLWEATRDAPVIDVEIKSLKHVDAVCWFDDRNPATLRNVVAHFQRMERTDTAYPILLDPDGQLFDGAHRVAKALARGQSTIKAVQLKKVPPPDEIVTA 121
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A5C5V748_9BACT (Uncharacterized protein n=1 Tax=Posidoniimonas corsicana TaxID=1938618 RepID=A0A5C5V748_9BACT) HSP 1 Score: 141 bits (355), Expect = 2.350e-41 Identity = 62/102 (60.78%), Postives = 79/102 (77.45%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDSI 306
+T RLW+ PV+ +EI SLKHLD VCWF D P TLRNV HF+RM+ D PI+LDP+GQ+FDGAHRVA+A++ G+TTI+AV+L +PPPDE+VDSI
Sbjct: 20 HTPRLWEQTKDYPVVEVEIASLKHLDVVCWFRDSHPATLRNVAAHFVRMQEADERIPILLDPNGQIFDGAHRVAEAMAAGKTTIRAVQLRRVPPPDEVVDSI 121
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A6B0XBQ7_9BACT (Chromosome partitioning protein ParB n=3 Tax=FCB group TaxID=1783270 RepID=A0A6B0XBQ7_9BACT) HSP 1 Score: 102 bits (253), Expect = 7.580e-26 Identity = 46/100 (46.00%), Postives = 65/100 (65.00%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVD 300
YT+RLWKLA LP IE+ES + LD CWF PT+R V H R+ ++ P+I++ +G+L DG HR+A+AL +G TI+AV+ ++P PD I D
Sbjct: 21 YTDRLWKLAQDLPEFEIEVESFQELDQDCWFGTGRTPTIREVAAHCKRINETNTECPVIINENGRLMDGGHRLARALLEGTATIKAVQFAQMPEPDVIED 120
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A6G2JLP4_9BACT (Chromosome partitioning protein ParB n=5 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6G2JLP4_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 5.830e-25 Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEI 294
YTERLW+LA LP ++E + LD CWF + P +R V +H R+ D P+I++ +G+L DG HR+A+AL +G T++AV+ E+P PDEI
Sbjct: 20 YTERLWELAKDLPEYDADVERFEELDRDCWFGEGRTPNIREVADHCRRINEADPRIPVIINDNGRLMDGGHRLARALLEGRKTVKAVRFEEMPEPDEI 117
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A7X3RQ37_9BACT (Chromosome partitioning protein ParB n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3RQ37_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 3.160e-24 Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 1
Query: 1 YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDSI 306
YTE+LW + LP I++ ++K LD CWF + PTLR + H ++ H YPIIL+ DG L DG HR+ KA+ +G TI+AV+ +P PDEI + +
Sbjct: 17 YTEKLWMQSRDLPPFEIDVSAIKELDEDCWFGEK-KPTLREIARHCKKINHASLKYPIILNVDGSLMDGGHRLCKAILEGHKTIKAVQFSSMPEPDEIHELV 117
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A7Y9I4Q1_9ACTN (Uncharacterized protein n=1 Tax=Microlunatus parietis TaxID=682979 RepID=A0A7Y9I4Q1_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 1.030e-23 Identity = 48/100 (48.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query: 4 TERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEIVDS 303
TERLW LAA LPV+ + I+++ D CWFD P T R V H R++ D YP+IL DG+L DG HR+AKA G T I AV+ P PD IV +
Sbjct: 18 TERLWALAAGLPVVAVPIDAIAEFDQDCWFDGG-PATCREVARHADRIQRADLDYPVILSADGRLMDGGHRIAKAWLAGRTMINAVRFPVDPEPDYIVGT 116
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A7Y2D1Q8_9BACT (Uncharacterized protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7Y2D1Q8_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 2.140e-23 Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 4 TERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEI 294
TERLW LA L +E+ES + LD CWF P+LRNV EH R+ D PIIL+ DG L DG HR+ +AL +G+ + AV+ ++P PD+I
Sbjct: 16 TERLWDLARDLEPFEVEVESFRELDQDCWFGSHKVPSLRNVAEHCRRINTADFSKPIILNEDGSLMDGGHRLCRALLEGQKHVMAVRFEKMPAPDKI 112
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Match: A0A4R0JTP3_9ACTN (Uncharacterized protein n=3 Tax=Kribbella TaxID=182639 RepID=A0A4R0JTP3_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 3.740e-23 Identity = 47/97 (48.45%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 4 TERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEHVDSHYPIILDPDGQLFDGAHRVAKALSQGETTIQAVKLLELPPPDEI 294
TERLWKLA LPV + I+S++ D CWF + P T R V +H R++ D YP+IL DG+L DG HR+AKA G TTI A + P PD I
Sbjct: 18 TERLWKLAEDLPVEPVPIDSIREFDEDCWFGEG-PVTCRMVAQHADRIQKADLRYPVILSADGRLMDGGHRIAKAWLAGATTIDATRFTTDPTPDYI 113 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124701.5029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124701.5029.1 >prot_M-pyrifera_M_contig124701.5029.1 ID=prot_M-pyrifera_M_contig124701.5029.1|Name=mRNA_M-pyrifera_M_contig124701.5029.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp YTERLWKLAAQLPVITIEIESLKHLDGVCWFDDDFPPTLRNVVEHFIRMEback to top mRNA from alignment at M-pyrifera_M_contig124701:206..517- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124701.5029.1 ID=mRNA_M-pyrifera_M_contig124701.5029.1|Name=mRNA_M-pyrifera_M_contig124701.5029.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig124701:206..517- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124701:206..517- >mRNA_M-pyrifera_M_contig124701.5029.1 ID=mRNA_M-pyrifera_M_contig124701.5029.1|Name=mRNA_M-pyrifera_M_contig124701.5029.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig124701:206..517- (Macrocystis pyrifera P11B4 male)back to top |