mRNA_M-pyrifera_M_contig124684.5025.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: H3G9Z1_PHYRM (Coatomer subunit gamma n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9Z1_PHYRM) HSP 1 Score: 106 bits (264), Expect = 7.450e-24 Identity = 65/147 (44.22%), Postives = 86/147 (58.50%), Query Frame = 1
Query: 1 MLYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQVK--VEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
+L + PEFADLGAL S LTEAE EY+V T+HVF +H+VL F + NTV +L NV+ V + E ++V SVVP + GK +FVCL+ G G+ + ELKF V EV SG+V+ D DEE Y +E E+
Sbjct: 664 LLLQIPEFADLGALFRSSKRLELTEAETEYVVSCTKHVFAQHIVLQFKVLNTVSDQLLTNVN--VGFVMEPEEVWQVHSVVPLDKLAYGKTGSSFVCLQYTGDGVYPIVQLANVELKFKVHEVNPSSGEVEDDGFDEE-YPMEDIEI 807
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: K3WPR6_GLOUD (Coatomer subunit gamma n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WPR6_GLOUD) HSP 1 Score: 104 bits (259), Expect = 3.500e-23 Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQV-KVEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
LY+ PEFADLG + S LTEAE+EY+V T+HVF EH+VL F I NTV +L NV V + +++ SVVP + GK +VCLK +G G+ V ++ ELKF V EV +G+ + D DEE Y +E E+
Sbjct: 657 LYKIPEFADLGPIFRSSKPVELTEAEVEYVVSCTKHVFSEHLVLQFKIMNTVNDQLLTNVS--VGFAMDPDDVWQIHSVVPLKELAYGKTGSCYVCLKHIGDGMYPVVQIANELKFKVHEVNPSTGEAEDDGFDEE-YPMEDFEI 798
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A484DRI4_BRELC (Coatomer subunit gamma n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRI4_BRELC) HSP 1 Score: 103 bits (258), Expect = 4.770e-23 Identity = 61/146 (41.78%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQVK--VEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
L+ PEFA+LGAL S LTEAE EY+V T+HVF +H+VL F + NTV +L NVH V + + ++V S+VP + GK +++CL+ +G GL + ELKF V EV +G+V+ D DEE Y +E E+
Sbjct: 649 LFTIPEFAELGALFCSSKRLELTEAETEYVVSCTKHVFAQHIVLQFKVLNTVNDQLLTNVH--VGFVMEPEDVWQVHSIVPLERLAYGKTGSSYICLQYIGDGLYPIVQLANVELKFKVHEVNPSTGEVEDDGFDEE-YPMEDIEI 791
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: G4YG53_PHYSP (Coatomer subunit gamma n=32 Tax=Peronosporaceae TaxID=4777 RepID=G4YG53_PHYSP) HSP 1 Score: 103 bits (256), Expect = 8.860e-23 Identity = 63/146 (43.15%), Postives = 84/146 (57.53%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQVK--VEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
LY PEFA+LGAL S LTEAE EY+V T+HVF +H+VL F + NTV +L NV+ V + + ++V SVVP + GK +VCL+ G G+ + ELKF V EV SG+V+ D DEE Y +E E+
Sbjct: 650 LYTIPEFAELGALFRSSKRLELTEAETEYVVSCTKHVFAQHIVLQFKVLNTVSDQLLTNVN--VGFVMEPEDVWQVHSVVPLDKLAYGKTGSCYVCLQYTGDGVYPIVQLANVELKFKVHEVNPSSGEVEDDGFDEE-YPMEDIEI 792
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A0N7L4T1_PLAHL (Coatomer subunit gamma n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4T1_PLAHL) HSP 1 Score: 102 bits (255), Expect = 1.210e-22 Identity = 63/146 (43.15%), Postives = 83/146 (56.85%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQVK--VEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
LY PEFA+LGAL S LTEAE EY+V T+HVF +H+VL F + NTV +L NV VE + + ++V SV+P + GK +VCL+ G G+ V EL F V EV SG+V+ D DEE Y +E E+
Sbjct: 650 LYTIPEFAELGALFRSSKRLELTEAETEYVVSCTKHVFAQHLVLQFKVLNTVSDQLLTNVR--VEFVLEPEDVWQVQSVIPVSKLAYGKTGSCYVCLRFTGDGVYPVVQLANVELLFKVHEVNPSSGEVEDDGFDEE-YPMENLEI 792
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A2D4BSX7_PYTIN (Coatomer subunit gamma n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSX7_PYTIN) HSP 1 Score: 100 bits (250), Expect = 5.700e-22 Identity = 62/145 (42.76%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQ-VKVEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
LY PEFADLG L S LTEAE EY+V T+HVF EH+VL F + NTV +L NV V + + ++V S+VP + GK +VC+K V PG V+ +ELKF + EV +G + D DEE Y +E E+
Sbjct: 661 LYNIPEFADLGPLFRSSKPLELTEAETEYVVTCTKHVFAEHIVLQFNVLNTVNDQLLTNVS--VGFIMDPDDVWQVHSIVPLKELAYGKSGSCYVCVKHVAPGAYPLVQFASELKFKMHEVNPTTGIAEDDGFDEE-YPMENFEI 802
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A7S1GAC4_9STRA (Coatomer subunit gamma n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAC4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.190e-20 Identity = 61/145 (42.07%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKR-VGPGLGQVKVEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
LY+ P FA LG L S LTE ELEY+V RHVF +HVV F +TNTV VL NV +E + + +E +VVPA V P ++VCL+R G ELK+ CEV+ + + D G EEDY LE E+
Sbjct: 653 LYKIPAFASLGPLFRSTRPSELTETELEYVVNCVRHVFADHVVFQFNVTNTVPEQVLMNVSVAME--ASEPDAWEEIAVVPATRVACNVPTPSYVCLRRNPAAGFPTTTFACELKYTACEVDPATKEALGD-GFEEDYPLEDLEV 794
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A7S3BB38_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BB38_9VIRI) HSP 1 Score: 91.7 bits (226), Expect = 2.900e-19 Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 16 PEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQVKVEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
PE A LG LV S LTE + EY V + +HVFPEHVV F +NTV L+ V ++ A AED+E ++VP + G A +V + R L K L+FNV EV+ ++G+V+ D D+E Y LE E+
Sbjct: 86 PELAHLGELVKSSAQVQLTEEDTEYAVSVVKHVFPEHVVFQFDCSNTVAEQQLSEVSVLMDT--ADAEDFEEEAIVPLKSMPYGSSAPTYVVMARAEGALAFGKFYCTLRFNVKEVDPNTGEVEEDGFDDE-YQLEDVEV 222
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A812L436_9DINO (Coatomer subunit gamma n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812L436_9DINO) HSP 1 Score: 86.3 bits (212), Expect = 7.370e-17 Identity = 59/144 (40.97%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 4 LYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAE---DYEVSSVVPAPLVRAGKPAHAFVCLKR-VGPGLGQVKVEAELKFNVCEVEEDSGDVDVDAGDEEDYALE 423
LY PEFA GAL S P LTE E EY+V +T+HVF EH+VLDF + NT+ L V V L A E ++ + V A + AGK AHA+V L+R G EA L F +V+ +G+ D + G ++Y LE
Sbjct: 651 LYAIPEFAGYGALFKSSPPAPLTETEQEYVVHVTKHVFEEHIVLDFTVKNTLADVRLEQVT--VSLQPASPELLAVWQQTGSVGASVAVAGKEAHAYVALQRNAAAGYPSGTFEAALSFTAVDVDPTTGEADGE-GFPDEYPLE 791
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Match: A0A662XY71_9STRA (Coatomer subunit gamma n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XY71_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.360e-16 Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 16 PEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITNTVGGAVLANVHPFVELLGAGAEDYEVSSVVPAPLVRAGKPAHAFVCLKRVGPGLGQVKVEAELKFNVCEVEEDSGDVDVDAGDEEDYALEGCEL 435
PEFA+LGAL S LTEAE EY+V T+HVF +H+VL + NTV +L+NV V + E ++V S+VP + GK +VC++ +G G+ + A ++ V EV +G+V+ D DEE Y +E E+
Sbjct: 631 PEFAELGALFRSSKRVELTEAETEYVVSCTKHVFAQHIVLQ--VLNTVSDQLLSNVS--VGFVMEPEEVWQVQSIVPLDKLAYGKTGSCYVCVQYIGDGVYPIVQLANVE--VHEVNPSTGEVEDDGFDEE-YPMEDMEI 763 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124684.5025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124684.5025.1 >prot_M-pyrifera_M_contig124684.5025.1 ID=prot_M-pyrifera_M_contig124684.5025.1|Name=mRNA_M-pyrifera_M_contig124684.5025.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp MLYESPEFADLGALVHSCPAESLTEAELEYLVELTRHVFPEHVVLDFGITback to top mRNA from alignment at M-pyrifera_M_contig124684:16..450- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124684.5025.1 ID=mRNA_M-pyrifera_M_contig124684.5025.1|Name=mRNA_M-pyrifera_M_contig124684.5025.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig124684:16..450- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124684:16..450- >mRNA_M-pyrifera_M_contig124684.5025.1 ID=mRNA_M-pyrifera_M_contig124684.5025.1|Name=mRNA_M-pyrifera_M_contig124684.5025.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig124684:16..450- (Macrocystis pyrifera P11B4 male)back to top |