mRNA_M-pyrifera_M_contig12463.5006.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: D7FJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ7_ECTSI) HSP 1 Score: 507 bits (1306), Expect = 1.040e-172 Identity = 247/341 (72.43%), Postives = 282/341 (82.70%), Query Frame = 1
Query: 4 GIETFYRINGHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGNVEEFSILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGFDTDPGGVRGFKELVRNGMSAADALAESQAALDFADEPIARALPPLGALRGERNDDDGEMDSQMLLGSVMDSLRSK--ETSRNGGVAVPSSP 1020
GI F+ I+GHSRVP R+V+PAEEPWPMEIWGHKLGSRIAQMRMTGRWLG E+T EERR +L++ GFEWRLRV DD+ + DGN EEFSILCEGLE+Y+ELGGSVPNMP T+V+PNA+PWPIRTRGFPLG+QVR++RSRQKYAKDSQ D LLAL VPINP V+ EK+GGRWGGPTETRF+KLCKALETF LYGH QVP FEVPRD WP TW+VKLG SL NIV+KGTFIKGYPDRQARLEALGFDTDPGG+RGFKELV++GMS ADALAESQA+LDFA EP L A G ++ E+DSQMLLG+V+DSLR++ E G + SSP
Sbjct: 223 GIGVFFGIHGHSRVPMRFVVPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGQDEKTTEERRTVLEQYGFEWRLRVKDDEYDADGNPEEFSILCEGLEVYRELGGSVPNMPPTWVVPNAEPWPIRTRGFPLGAQVRIIRSRQKYAKDSQEKTDILLALDVPINPNVTNEKLGGRWGGPTETRFNKLCKALETFVVLYGHAQVPNTFEVPRDPSWPEETWDVKLGRSLVNIVSKGTFIKGYPDRQARLEALGFDTDPGGIRGFKELVKSGMSEADALAESQASLDFASEPSG-----LAATGGAGSEKTAEIDSQMLLGNVVDSLRTEGAEGGSGRGAGLSSSP 558
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: A0A6H5JXP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP7_9PHAE) HSP 1 Score: 507 bits (1306), Expect = 7.020e-169 Identity = 242/332 (72.89%), Postives = 278/332 (83.73%), Query Frame = 1
Query: 4 GIETFYRINGHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGNVEEFSILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGFDTDPGGVRGFKELVRNGMSAADALAESQAALDFADEPIARALPPLGALRGERNDDDGEMDSQMLLGSVMDSLRSKETSRNGG 999
GI F+ I+GHSRVP R+V+PAEEPWPMEIWGHKLGSRIAQMRMTGRWLG E+T EERR +L++ GFEWRLRV DD+ + DGN EEFSILCE L++Y+ELGGSVPNMP T+V+PNADPWPIRTRGFPLG+QVR++RSRQKYAKDSQ D LLAL VPINP ++ EK+GGRWGGPTETRF+KLCKALETF LYGH QVP FEVPRD WP TW+VKLG SL NIV+KGTFIKGYPDRQARLEALGFDTDPGG+RGFKELV++GMS ADALAESQA+LDFA EP L A G +++ E+DSQMLLG+V+DSLR++ GG
Sbjct: 337 GIGVFFGIHGHSRVPMRFVVPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGQDEKTTEERRTVLEQYGFEWRLRVKDDEYDADGNPEEFSILCEALKVYRELGGSVPNMPPTWVVPNADPWPIRTRGFPLGAQVRIIRSRQKYAKDSQEKTDTLLALDVPINPNITNEKLGGRWGGPTETRFNKLCKALETFVMLYGHAQVPNTFEVPRDPSWPEETWDVKLGRSLVNIVSKGTFIKGYPDRQARLEALGFDTDPGGIRGFKELVKSGMSEADALAESQASLDFASEPSG-----LAATGGAGSEETTEIDSQMLLGNVVDSLRTEGAEGGGG 663
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: F0YNU5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNU5_AURAN) HSP 1 Score: 162 bits (410), Expect = 7.880e-41 Identity = 97/257 (37.74%), Postives = 134/257 (52.14%), Query Frame = 1
Query: 28 NGHSRVPTRYVIPAEEP--WPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGN-VEEFSILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLA--------LGVPINPI-----VSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALG 750
NG RVPTR+ +P E+ +P + G KLG R+A +R TGR++ D E RR LD LGFEWRLR + +E F +L E LE Y+EL +M A FV+P DPWP RG PLGS+++ ++ D+ + +A LGV P + KV G T RF+ + +AL + GH VP F VP + PWP W +KLG ++ I + GTF+K +P+R+ RL LG
Sbjct: 92 NGDLRVPTRFCVPEEDGTGFPEKCRGLKLGQRVASIRATGRYVAD-----EGRRQKLDALGFEWRLRRPSSASSAANEPLEPFEVLMEALESYKELHDGSVSMSANFVVPRVDPWPPACRGLPLGSRLQTIKESDVPYFDAATVGEETIAKRVAELARLGVMRRPAEPEAPAAAPKVAGAKSSTTR-RFEIVYEALSAYKAEKGHVNVPQTFVVPSEAPWPEDAWEMKLGSRVNAIRSHGTFLKRHPERRQRLLDLG 342
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: A0A7S4MVR1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVR1_9STRA) HSP 1 Score: 157 bits (397), Expect = 5.620e-39 Identity = 92/263 (34.98%), Postives = 140/263 (53.23%), Query Frame = 1
Query: 31 GHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGNVEEFSILCEGLEIYQEL-----GGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWN-----VKLGMSLSNIVTKGTFIKGYPDRQARLEALGFDTD-PGGVRGFK 786
G +VP+R+V+P PWP WG KLG R++ +R TG++ +++ RR+ LD +GF WRLR D + DG F + LE Y+ + GG + N+PA FV+PNADPWP+ TRG PLG ++ +RS+ Y K + +D+L LG + ++ + R+ ++ AL + L G VP F +P D WN ++LG ++ + ++GTF+K P R+ L+ LGF D P G G K
Sbjct: 148 GDLKVPSRFVVPGMPPWPEAGWGLKLGQRVSAIRSTGKYNVQSDDA---RRSALDDMGFLWRLRSPSGDKKMDGIT--FDQIYVALETYKSVIGSGKGGKI-NVPANFVVPNADPWPVSTRGLPLGKKIPAIRSKA-YLKSNPGASDKLNELGFEFDGKIAAN----------DQRYKRVYDALVRYKELNGDLLVPQPFVIPEDGQAGAEEWNEDARGLRLGARVNAVRSQGTFVKTNPGRRRELDELGFVWDLPAGAGGKK 393
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: A0A835YSF3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSF3_9STRA) HSP 1 Score: 153 bits (386), Expect = 1.080e-37 Identity = 97/292 (33.22%), Postives = 141/292 (48.29%), Query Frame = 1
Query: 4 GIETFYRINGHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWL-------------GDTEETLEERRNILDKLG------------FEWRLRVHDDDTEGDGN--------VEEFSILC------EGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQK--YAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGFD 756
G+ T+ ++G +RVP+R+ +PAE PWP + G KLG R+ +R TGR+L G E EER LD LG FEW++R DD E +++ SIL ++++ L G +P+ FV+P+ + WP R G LG + +R R + Y +L A+G + TET+F K+ AL + L G VP +F VP + PWP W +KLG S+++I + GTFIK +P R+A LEA GFD
Sbjct: 135 GLRTYAALHGDTRVPSRFAVPAEAPWPEALHGDKLGMRVNAIRSTGRYLQQFLAEGAKKASCGLLPERREERHTELDALGXXXXXXXXXXXXFEWKVRTSDDADEASAAGFEAVVEALQDLSILLMFXXXXXXXQVFKSLRGHTL-VPSDFVVPSTEEWPQRLWGLGLGQRCSGIRRRVRNMYVAGHPQRLQQLAAIGFDCD----------NKNQATETKFRKIFNALMMYRDLNGTLDVPQSFAVPGEAPWPEEWWGMKLGQSVASIRSTGTFIKAHPARRAMLEAEGFD 415
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: B7FW16_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FW16_PHATC) HSP 1 Score: 150 bits (378), Expect = 1.820e-36 Identity = 89/270 (32.96%), Postives = 136/270 (50.37%), Query Frame = 1
Query: 31 GHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEW------RLRVHDDDTEGDGNVEEFSILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGV----------------PINPIVSTEKVGGRWGGP---TETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGFDTDP 765
G +VP ++++P PWP WG KLG +A +R+TG+++ ++ R+ L+KLGF W + R +D + VE+ + L Y+E + +PA +++P+A+PWP R RG PLGSQ+ + Q + QA +L LGV P P+VS E P + RF K+ AL T+ +YG VP F VP PWP TW ++LG ++ + ++GTF+ PDR+ L+ LGF P
Sbjct: 169 GDVKVPQKFIVPTASPWPKPAWGLKLGKVVANIRLTGKYIHGRDK----RKQALEKLGFLWAARSTPQTRAEAEDDRSNVTVEQ---ILAALVAYRENVAPLGPVPAKYIVPDAEPWPERVRGLPLGSQLARLPMDQ-LPETIQA---KLQDLGVMERYMPLASSGSMGAPPTAPVVSGEAYQSASNVPPTANDIRFHKVYLALRTYKDVYGDLLVPQPFAVPSKAPWPQETWGLRLGARVNAVRSQGTFVNANPDRRQALDDLGFVWSP 427
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: A0A7S2JR57_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JR57_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.300e-34 Identity = 82/242 (33.88%), Postives = 134/242 (55.37%), Query Frame = 1
Query: 31 GHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGNVEEFSILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRD-EPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGF 753
G +VP+R+V+P+ PWP WG KLG+++A +R TG+++ E + RR ILD +GF WRLR D + DG +F + + L Y++ G++ ++P TF +P+ + WP +RG PLGS++ +RS+ Y K+ +L LG+ ++ V+ R+ + AL + +YG VP F VP++ E W W ++LG ++ I ++GTF+ P R+ L LGF
Sbjct: 114 GDLKVPSRFVVPSMPPWPESGWGLKLGTKVAAIRSTGKYV----ENDDGRRQILDDIGFLWRLRSPSPDKKMDG--VKFEQIYDALVQYKKEFGNL-DVPITFSVPDIESWPQHSRGLPLGSKLATIRSKT-YLKNRPEQRKKLEELGLQLDGKVAANSA----------RYHLVYDALVRYKEIYGDLLVPQPFVVPKEAEDWNEPFWGLRLGARVNAIRSQGTFVNTDPSRREELSELGF 337
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: A0A7S3QCY2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCY2_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.360e-34 Identity = 82/245 (33.47%), Postives = 128/245 (52.24%), Query Frame = 1
Query: 31 GHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGNVEEF--SILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPR-DEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGFD 756
G +VP+R+V+P+ PWP WG KLG R+A +R TG+++ D +E RR +LD +GF WRLR D + D E+ +++ EI + +VP F++PN DPWP +RG PLG ++ VRS+ Y K + ++L +G + V+ + RF+ + AL + + G VP F V W W ++LG ++ I ++GTF+K P R+ L LGF+
Sbjct: 141 GDLKVPSRFVVPSMPPWPESGWGLKLGQRVASIRSTGKYVDDDDE----RRKVLDDMGFLWRLRAPSPDKKVDVTFEQIYDALVTYRKEIQTDESLTVPT---NFIVPNYDPWPEASRGMPLGKKIPTVRSKA-YLKANPGAKEKLSEIGFEFDGKVAAN----------DARFNNVYDALVRYKEINGDLLVPQPFIVAEGSSDWEERFWGLRLGARVNAIRSQGTFVKTNPSRKELLNKLGFE 367
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: A0A7S1YI05_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YI05_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.100e-33 Identity = 81/248 (32.66%), Postives = 134/248 (54.03%), Query Frame = 1
Query: 31 GHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFEWRLRVHDDDTEGDGNVEEFSILCEGLEIY-QELGGSVPN-----MPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVP-RDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQARLEALGF 753
G ++P R+V+P+ +PWP WG LG R++ +R TG+++ D + RR +LD +GF WR R+ D + ++ F + E L Y +E +V + +P F +P+ +PWP+ RG PLG ++ + S+ +Y K +L +G+ S + GR F K+ +AL+ + L G VP F VP ++EPWP STW ++LG ++ I + GT++ P+R+ L+ LGF
Sbjct: 67 GDLKIPQRFVVPSSKPWPEPAWGMPLGKRVSAIRNTGKYVTDNPK----RRKVLDDMGFIWRARMRSD-KDALASIT-FQSVLEALGTYVKEYPQTVDSTTGIQVPLNFEVPDCEPWPVAVRGMPLGQKLAEI-SKPEYKKKHPMLIKKLEEVGMKFQDD-SKHTLDGR--------FQKVYEALKVYKELNGDLLVPQPFIVPEKEEPWPESTWGLRLGARVNAIRSHGTYVNANPERRKMLDDLGF 298
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Match: G4YEG8_PHYSP (HA domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEG8_PHYSP) HSP 1 Score: 131 bits (329), Expect = 5.040e-32 Identity = 84/257 (32.68%), Postives = 123/257 (47.86%), Query Frame = 1
Query: 1 PGIETFYRINGHSRVPTRYVIPAEEP-WPMEIWGHKLGSRIAQMRMTGRWLGDTEETLEERRNILDKLGFE---WRLRVHDDDTEGDGNVEEFSILCEGLEIYQELGGSVPNMPATFVIPNADPWPIRTRGFPLGSQVRVVRSRQKYAKDSQANADRLLALGVPINPIVSTEKVGGRWGGPTETRFDKLCKALETFAHLYGHTQVPINFEVPRDEPWPISTWNVKLGMSLSNIVTKGTFIKGYPDRQA-RLEALGFD 756
P ++ +Y INGHS VP+ +V+P+++ WP +WG +LG I +R + E ++ E LDK+ F WR R+ D IL +E G N+ FV+PN WP TRG LG+ V +R R Y ++ + D+L +G NP RW ++ ALE + +YGH VP++F VP EPWP T ++LG + G + Y +R + RLEALG D
Sbjct: 69 PSLQKYYEINGHSEVPSVFVVPSDDDRWPKVLWGFRLGQTITSIRYADTYKAQREASVHE----LDKIEFSTLTWRERMWDT-----------KILPALAAFKREFGHC--NVNFNFVVPNDPNWPKTTRGLRLGATVANMRCRGNYDDMAERDKDKLKEIGFVWNPE------DDRWTY-------RIMPALEAYCKIYGHGWVPVDFVVPNQEPWPEDTRGLRLGNIFMKVRHTGAY-SSYVERDSERLEALGID 294 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12463.5006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12463.5006.1 >prot_M-pyrifera_M_contig12463.5006.1 ID=prot_M-pyrifera_M_contig12463.5006.1|Name=mRNA_M-pyrifera_M_contig12463.5006.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=340bp PGIETFYRINGHSRVPTRYVIPAEEPWPMEIWGHKLGSRIAQMRMTGRWLback to top mRNA from alignment at M-pyrifera_M_contig12463:116..6805+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12463.5006.1 ID=mRNA_M-pyrifera_M_contig12463.5006.1|Name=mRNA_M-pyrifera_M_contig12463.5006.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6690bp|location=Sequence derived from alignment at M-pyrifera_M_contig12463:116..6805+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12463:116..6805+ >mRNA_M-pyrifera_M_contig12463.5006.1 ID=mRNA_M-pyrifera_M_contig12463.5006.1|Name=mRNA_M-pyrifera_M_contig12463.5006.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2040bp|location=Sequence derived from alignment at M-pyrifera_M_contig12463:116..6805+ (Macrocystis pyrifera P11B4 male)back to top |