prot_M-pyrifera_M_contig124613.5004.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124613.5004.1
Unique Nameprot_M-pyrifera_M_contig124613.5004.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
BLAST of mRNA_M-pyrifera_M_contig124613.5004.1 vs. uniprot
Match: D8LUA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA4_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 5.300e-11
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 VVISTGLRRIGSLQPVRLTLQTLCLTEQGISRMQSLDLTSLRRLYLHNNRISRITGLE 58
            VVI  GLRRI +L+PVR +L  +CL +QG+ +M+ L L  LR LYLH N+IS+I GL+
Sbjct:    3 VVIDCGLRRISNLEPVRHSLVKMCLCDQGLKKMEGLCLPGLRELYLHQNKISKIEGLD 60          
BLAST of mRNA_M-pyrifera_M_contig124613.5004.1 vs. uniprot
Match: A0A6A3SET5_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SET5_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.860e-6
Identity = 29/58 (50.00%), Postives = 37/58 (63.79%), Query Frame = 0
Query:    2 VISTGLRRIGSLQPVRLTLQTLCLTEQGISRMQSLD-LTSLRRLYLHNNRISRITGLE 58
            +++  L  I +L+PV  +L  LCL+ Q I+RM  L  L  LR LYL  NRISRI GLE
Sbjct:   56 MVNCNLEVISNLEPVGASLVHLCLSNQNITRMSGLSSLRQLRHLYLQQNRISRIEGLE 113          
BLAST of mRNA_M-pyrifera_M_contig124613.5004.1 vs. uniprot
Match: A0A8K1C5F1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5F1_PYTOL)

HSP 1 Score: 51.2 bits (121), Expect = 5.590e-6
Identity = 30/57 (52.63%), Postives = 38/57 (66.67%), Query Frame = 0
Query:    2 VISTGLRRIGSLQPVRLTLQTLCLTEQGISRMQSLDLTSLRRLYLHNNRISRITGLE 58
            +I+  L RI  L  VR +L  LCL+ Q I+RM++LDL  LR+LYL  N I RI GLE
Sbjct:   56 LINCKLTRIPLLTLVRESLVHLCLSAQAITRMEALDLPHLRKLYLQQNLIERIEGLE 112          
BLAST of mRNA_M-pyrifera_M_contig124613.5004.1 vs. uniprot
Match: A0A662YI96_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YI96_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 28/59 (47.46%), Postives = 41/59 (69.49%), Query Frame = 0
Query:    1 VVISTGLRRIGSLQPVRLTLQTLCLTEQGISRMQSLD-LTSLRRLYLHNNRISRITGLE 58
            V+I+ GL+ + +L+PV  +L  LCL+ Q I+++  L  L  LRRLYL  NRI++I GLE
Sbjct:   16 VLINCGLKELSNLEPVGDSLVHLCLSNQNITQICGLSALPQLRRLYLQQNRIAQIEGLE 74          
BLAST of mRNA_M-pyrifera_M_contig124613.5004.1 vs. uniprot
Match: A0A662XPA9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPA9_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 5.470e-5
Identity = 28/59 (47.46%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 VVISTGLRRIGSLQPVRLTLQTLCLTEQGISRMQSLD-LTSLRRLYLHNNRISRITGLE 58
            V+I+ GL  + +L+PV  +L  LCL+ Q I++M  L  L  LR LYL  NRI++I GLE
Sbjct:   16 VLINCGLVELSNLEPVGASLVHLCLSNQSITQMCGLSALPQLRHLYLQQNRIAQIEGLE 74          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124613.5004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LUA4_ECTSI5.300e-1155.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6A3SET5_9STRA2.860e-650.00Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A8K1C5F1_PYTOL5.590e-652.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662YI96_9STRA1.340e-547.46Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662XPA9_9STRA5.470e-547.46Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 4..58
e-value: 8.6E-6
score: 26.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 40..58
score: 8.374
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 19..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124613contigM-pyrifera_M_contig124613:306..479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124613.5004.1mRNA_M-pyrifera_M_contig124613.5004.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124613 306..479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124613.5004.1 ID=prot_M-pyrifera_M_contig124613.5004.1|Name=mRNA_M-pyrifera_M_contig124613.5004.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
VVISTGLRRIGSLQPVRLTLQTLCLTEQGISRMQSLDLTSLRRLYLHNNR
ISRITGLE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt