prot_M-pyrifera_M_contig99662.22906.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig99662.22906.1
Unique Nameprot_M-pyrifera_M_contig99662.22906.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length150
Homology
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: UPI00077A1F41 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A1F41)

HSP 1 Score: 147 bits (371), Expect = 7.850e-42
Identity = 81/151 (53.64%), Postives = 102/151 (67.55%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVYDRAMGGGPDMRASENMEAFNRR--DPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV-TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDA 149
            KEDLDL NHL GLKR Y+K+SF T+ DL+ V+  I P++ KNK + K N  Y+  MG   DM   E M A NRR  D +  + DIREYDV +++RV+IDL I VG+WY      G+  +L  R+DLL R +P V AFDIETTKLPLKFPD+
Sbjct:   51 KEDLDLNNHLVGLKRNYIKLSFHTVNDLMKVKRDIMPAVRKNKEQAKTNAAYNIVMGA--DMNEDE-MIAANRRNADQMSNVVDIREYDVPYHVRVAIDLKIFVGHWYNVKIHGGIHPELARRDDLLDRPDPVVLAFDIETTKLPLKFPDS 198          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A0S7M9P1_9TELE (DNA polymerase epsilon catalytic subunit (Fragment) n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A0S7M9P1_9TELE)

HSP 1 Score: 147 bits (372), Expect = 3.290e-40
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSF--ATGVTKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R + ND Y      A+ GG  + A E+    +  D LD I D+REYDV +++RVSIDL I V +WY   +  +T   ++  R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  136 KEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNREREQANDAYTSMLSSALSGGSVISADEDGTLKSIADQLDNIVDMREYDVPYHVRVSIDLKIHVAHWYNVRYRGSTFPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 290          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A4W4F0D4_ELEEL (DNA polymerase epsilon catalytic subunit n=1 Tax=Electrophorus electricus TaxID=8005 RepID=A0A4W4F0D4_ELEEL)

HSP 1 Score: 145 bits (366), Expect = 4.870e-40
Identity = 77/155 (49.68%), Postives = 101/155 (65.16%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVYDR----AMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+ F T+ DL+ V+ +I P++ KN+ R K ND Y      A+ GG  M   E+  +    D LD I D+REYDV +++R+SIDL I V +WY   +   V   ++  R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  135 KEDLDLPNHLVGLKRTYIKLCFNTVDDLVKVKREISPAVKKNREREKSNDTYTNMLSSALVGGSVMSPEEDGSSKRMADQLDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSVYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 289          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: UPI000511B5F4 (DNA polymerase epsilon catalytic subunit A-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI000511B5F4)

HSP 1 Score: 145 bits (366), Expect = 1.250e-39
Identity = 79/157 (50.32%), Postives = 108/157 (68.79%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRR--DPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSF--ATGVTKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+ VR +IFP++ KN+ R + +DVY      A+ GG     S + E  +R+  + +D I D+REYDV +++R+SIDL I V +WY   +  +T   ++T R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:   73 KEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEIFPAVRKNRERDQASDVYTAMLSSALSGGS---LSTDEEGASRKVANQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSTYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 226          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A8C5B970_GADMO (DNA polymerase epsilon catalytic subunit n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5B970_GADMO)

HSP 1 Score: 143 bits (360), Expect = 4.850e-39
Identity = 77/155 (49.68%), Postives = 98/155 (63.23%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL  VR +I P++ KN+ R + ND Y      AM GG      E+       D LD + D+REYDV +++RVSIDL I V +WY   +       ++  R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  122 KEDLDLPNHLVGLKRSYVKLSFSTVDDLTRVRREIAPAVRKNREREQSNDAYTTMLSSAMAGGSVTMEEEDGRYKKMSDQLDNVVDMREYDVPYHVRVSIDLKIHVAHWYNVRYRGTAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 276          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A3B5JX93_TAKRU (DNA polymerase epsilon catalytic subunit n=1 Tax=Takifugu rubripes TaxID=31033 RepID=A0A3B5JX93_TAKRU)

HSP 1 Score: 143 bits (360), Expect = 5.200e-39
Identity = 75/155 (48.39%), Postives = 101/155 (65.16%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R + ND Y      A+ GG    A +     +  D LD I D+REYDV +++R+SIDL I V +WY   + +     ++  R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  136 KEDLDLPNHLVGLKRSYIKLSFNTVDDLVKVKREISPAVRKNREREQSNDAYTSMLSSALSGGNVASADDERMLKSISDQLDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRSSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 290          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A673YMK9_SALTR (DNA polymerase epsilon catalytic subunit n=3 Tax=Salmoninae TaxID=504568 RepID=A0A673YMK9_SALTR)

HSP 1 Score: 142 bits (359), Expect = 5.550e-39
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R K ND Y      A+ GG    A E+  +    D +D I D+REYDV +++R+SIDL I V +WY   +       ++  R DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  121 KEDLDLPNHLVGLKRSYVKLSFNTVDDLMKVKREISPAVRKNREREKSNDTYTSMLSSALAGGSVSAADEDGMSKKTSDQMDNIVDMREYDVPYHVRLSIDLKIHVAHWYNVRYRGSAYPPEIILRSDLVERPDPVVLAFDIETTKLPLKFPDAE 275          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A2D0PMY7_ICTPU (DNA polymerase epsilon catalytic subunit n=3 Tax=Ictaluridae TaxID=7996 RepID=A0A2D0PMY7_ICTPU)

HSP 1 Score: 149 bits (376), Expect = 7.980e-39
Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R K ND Y      A+ GG  M A E+  +    D LD I D+REYDV ++IR+SIDL I V +WY   +       ++  R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  136 KEDLDLHNHLVGLKRNYIKLSFNTVDDLIKVKREISPAVRKNREREKSNDAYTSMLSSALAGGSVMTADEDGTSKKMSDQLDNIVDMREYDVPYHIRLSIDLKIHVAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 290          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A3Q3AW75_KRYMA (DNA polymerase epsilon catalytic subunit n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3AW75_KRYMA)

HSP 1 Score: 142 bits (358), Expect = 9.650e-39
Identity = 75/155 (48.39%), Postives = 102/155 (65.81%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+  + +I P++ KN+ R + ND Y      A+ G     A E+  + +  D LD I D+REYDV +++R+SIDL I V +WY+  +  G    ++  R+DL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:  126 KEDLDLPNHLVGLKRNYIKLSFNTVDDLVKAKREIAPAVRKNREREQSNDAYTSMLSSALAGASVTPADEDGMSKSIADQLDNIVDMREYDVPYHVRLSIDLKIHVAHWYSVRYRGGAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAE 280          
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Match: A0A1A8NWF0_9TELE (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Nothobranchius rachovii TaxID=451742 RepID=A0A1A8NWF0_9TELE)

HSP 1 Score: 140 bits (354), Expect = 1.080e-38
Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 0
Query:    2 KEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVNDVY----DRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLSIRVGYWYTCSFATGV--TKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE 150
            KEDLDL NHL GLKR Y+K+SF T+ DL+ V+ +I P++ KN+ R + ND Y      A+ GG    A ++  + +  D L+ I D+REYDV +++R+SIDL I V +WY   +      +++  REDL+ R +P V AFDIETTKLPLKFPDAE
Sbjct:   95 KEDLDLPNHLVGLKRNYIKLSFNTVDDLIKVKREIAPAVRKNREREQSNDSYTSMLSSALSGGNVTSAYDDGMSKSIVDQLENIVDMREYDVPYHVRLSIDLKIHVAHWYNIRYRGSAFPSEIVRREDLVERPDPVVLAFDIETTKLPLKFPDAE 249          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig99662.22906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00077A1F417.850e-4253.64DNA polymerase epsilon catalytic subunit A-like n=... [more]
A0A0S7M9P1_9TELE3.290e-4050.32DNA polymerase epsilon catalytic subunit (Fragment... [more]
A0A4W4F0D4_ELEEL4.870e-4049.68DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
UPI000511B5F41.250e-3950.32DNA polymerase epsilon catalytic subunit A-like n=... [more]
A0A8C5B970_GADMO4.850e-3949.68DNA polymerase epsilon catalytic subunit n=1 Tax=G... [more]
A0A3B5JX93_TAKRU5.200e-3948.39DNA polymerase epsilon catalytic subunit n=1 Tax=T... [more]
A0A673YMK9_SALTR5.550e-3949.03DNA polymerase epsilon catalytic subunit n=3 Tax=S... [more]
A0A2D0PMY7_ICTPU7.980e-3950.97DNA polymerase epsilon catalytic subunit n=3 Tax=I... [more]
A0A3Q3AW75_KRYMA9.650e-3948.39DNA polymerase epsilon catalytic subunit n=1 Tax=K... [more]
A0A1A8NWF0_9TELE1.080e-3848.39DNA polymerase epsilon catalytic subunit (Fragment... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006133DNA-directed DNA polymerase, family B, exonuclease domainPFAMPF03104DNA_pol_B_exo1coord: 2..150
e-value: 1.1E-19
score: 70.8
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..150
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..150
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 16..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig99662contigM-pyrifera_M_contig99662:8..682 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig99662.22906.1mRNA_M-pyrifera_M_contig99662.22906.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig99662 8..682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig99662.22906.1 ID=prot_M-pyrifera_M_contig99662.22906.1|Name=mRNA_M-pyrifera_M_contig99662.22906.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp
MKEDLDLKNHLSGLKRQYLKVSFRTIGDLLHVRSKIFPSIDKNKARRKVN
DVYDRAMGGGPDMRASENMEAFNRRDPLDFIEDIREYDVSFYIRVSIDLS
IRVGYWYTCSFATGVTKLTHREDLLHRAEPRVFAFDIETTKLPLKFPDAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006133DNA-dir_DNA_pol_B_exonuc
IPR029703POL2
IPR012337RNaseH-like_sf