prot_M-pyrifera_M_contig98994.22773.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98994.22773.1
Unique Nameprot_M-pyrifera_M_contig98994.22773.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A3C0AM00_9PLAN (Ribonucleoside-diphosphate reductase subunit alpha (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AM00_9PLAN)

HSP 1 Score: 243 bits (619), Expect = 2.430e-75
Identity = 138/190 (72.63%), Postives = 141/190 (74.21%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPT EARNSNT+HRPVGLG+MGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSY GS                                               +NVMAIAPTATISTIIGVSQSIEPSYK
Sbjct:  190 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTPEARNSNTKHRPVGLGIMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYTGSKWDRGLLPIDTLDLYEKERGIPVEVDRQTRLDWQVVRDSIAANGMRNSNVMAIAPTATISTIIGVSQSIEPSYK 379          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A517Q244_9PLAN (Ribonucleoside-diphosphate reductase n=20 Tax=Planctomycetaceae TaxID=126 RepID=A0A517Q244_9PLAN)

HSP 1 Score: 246 bits (627), Expect = 1.130e-73
Identity = 140/190 (73.68%), Postives = 142/190 (74.74%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYF+ILASSELAGERGRYGSY GS                                               +NVMAIAPTATISTIIGVSQSIEPSYK
Sbjct:  583 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFSILASSELAGERGRYGSYEGSKWERGLLPIDTLDLYEKERGISVDVDRQARLDWQRVRDSIAANGMRNSNVMAIAPTATISTIIGVSQSIEPSYK 772          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: UPI001EE7FEFF (ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE7FEFF)

HSP 1 Score: 204 bits (519), Expect = 1.770e-58
Identity = 118/190 (62.11%), Postives = 128/190 (67.37%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+NLK HIV+GQLDL ML ET  TAMRMLDNVIDINYYPT EA+ SN RHRPVGLG+MGFQDALLA G+SY+S +AVEFAD SMEAISY+AILASSELA ERG+Y SY GS                                               +N MAIAPTATISTIIGVSQSIEPSYK
Sbjct:  579 VCNLGSINLKNHIVNGQLDLEMLRETTMTAMRMLDNVIDINYYPTPEAKRSNQRHRPVGLGLMGFQDALLAMGLSYSSDEAVEFADRSMEAISYYAILASSELAKERGKYSSYDGSKWDRGLLPIDTLDVLEQERGEALDVDRSASLDWTPVRESVAKYGMRNSNCMAIAPTATISTIIGVSQSIEPSYK 768          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A3B9D2Y0_9PLAN (Ribonucleoside-diphosphate reductase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D2Y0_9PLAN)

HSP 1 Score: 203 bits (517), Expect = 3.520e-58
Identity = 118/190 (62.11%), Postives = 127/190 (66.84%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGSVNL+ HIVDGQLD+ +LE TVRTAMRMLDNVIDINYYPT EA+NSN +HRPVGLG+MGFQDAL A  ISYAS +AVEFAD SMEAISY+AILASSELA ERG Y SY GS                                               +N MAIAPTATISTIIGVSQSIEP YK
Sbjct:  577 VCNLGSVNLRRHIVDGQLDVELLENTVRTAMRMLDNVIDINYYPTEEAKNSNQKHRPVGLGLMGFQDALAAMNISYASPEAVEFADRSMEAISYYAILASSELAAERGTYSSYAGSKWDRGLLPIDTVDLLESERGVTIDVDRSTTMDWDFVRKKIADNGIRNSNCMAIAPTATISTIIGVSQSIEPIYK 766          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A1P8WJY5_9PLAN (Ribonucleoside-diphosphate reductase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WJY5_9PLAN)

HSP 1 Score: 202 bits (515), Expect = 6.680e-58
Identity = 117/190 (61.58%), Postives = 126/190 (66.32%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+NL  H+VDGQLDL MLE+TVRTAMRMLDNVIDINYYPT EA+NSN +HRPVGLG+MGFQDAL A  ISYAS +AVEFAD SMEAISYFAIL SS+LA ERG Y SY GS                                               +N MAIAPTATISTIIGVSQSIEP YK
Sbjct:  577 VCNLGSINLWKHVVDGQLDLKMLEDTVRTAMRMLDNVIDINYYPTEEAKNSNQKHRPVGLGLMGFQDALAAMNISYASPEAVEFADRSMEAISYFAILGSSDLAAERGTYSSYSGSKWDRGLLPIDTMDLLESERGVPIDVDRSAQLDWELVRKRIAENGMRNSNCMAIAPTATISTIIGVSQSIEPIYK 766          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: F0SJS0_RUBBR (Ribonucleoside-diphosphate reductase n=3 Tax=Planctomycetaceae TaxID=126 RepID=F0SJS0_RUBBR)

HSP 1 Score: 202 bits (514), Expect = 8.740e-58
Identity = 117/190 (61.58%), Postives = 126/190 (66.32%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+NLK HIVDG L+L MLEETV TAMRMLDNVIDINYYPT EA N+N RHRPVG+G+MGFQDALLA  +SY   +AVEFAD SMEAISYFAILASS+LA ERGRY SY GS                                               +N MAIAPTATISTIIGVSQSIEPSYK
Sbjct:  578 VCNLGSINLKTHIVDGALNLQMLEETVFTAMRMLDNVIDINYYPTEEAANANKRHRPVGMGLMGFQDALLAMDLSYTCPEAVEFADRSMEAISYFAILASSQLAAERGRYSSYEGSKWDRGLLPIDTLDLLEEARGQAIEVDRSSSLDWDVVRKSVAENGMRNSNCMAIAPTATISTIIGVSQSIEPSYK 767          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A8J3HVI6_9CHLR (Ribonucleoside-diphosphate reductase n=1 Tax=Ktedonospora formicarum TaxID=2778364 RepID=A0A8J3HVI6_9CHLR)

HSP 1 Score: 197 bits (502), Expect = 2.020e-56
Identity = 112/190 (58.95%), Postives = 125/190 (65.79%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+NL  HI+DG LD   L++T+RTA+RMLDNVIDINYYPT EARN+N RHRPVGLG+M FQDAL   GISYAS +AVEFAD SMEAISY+AI ASSELA ERG YGSY GS                                               +NVMAIAPTATIS+I+GVSQSIEPSYK
Sbjct:  463 VCNLGSINLAAHIIDGNLDHERLQKTIRTAVRMLDNVIDINYYPTTEARNANLRHRPVGLGLMAFQDALYKMGISYASQEAVEFADHSMEAISYYAISASSELAAERGAYGSYQGSKWDRGILPIDSIDLLEAERGEPVEMDRSASMNWDVVRASIKQHGMRNSNVMAIAPTATISSIVGVSQSIEPSYK 652          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A3C1QZW4_9PLAN (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C1QZW4_9PLAN)

HSP 1 Score: 197 bits (501), Expect = 2.540e-56
Identity = 114/190 (60.00%), Postives = 127/190 (66.84%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+NL+ H+VDG+LDL  LEETVRTA+RMLDNVIDIN+YPT EARN+N RHRPVGLG+MGFQDAL A GI YAS  AVEFAD SMEAISY+AILASSELA ERGRY SY GS                                               +NVMAIAPTATIS I GV+QSIEP+Y+
Sbjct:  585 VCNLGSINLRNHVVDGRLDLERLEETVRTAVRMLDNVIDINFYPTDEARNANLRHRPVGLGLMGFQDALAACGIEYASDAAVEFADRSMEAISYYAILASSELAAERGRYSSYPGSKWDRGLLPIDTIAVLEHERGMDIDVDRSSTFDWEPVRQSVAKHGMRNSNVMAIAPTATISNICGVAQSIEPAYQ 774          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A7Z9LZ33_9PLAN (Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Z9LZ33_9PLAN)

HSP 1 Score: 190 bits (482), Expect = 5.720e-56
Identity = 111/190 (58.42%), Postives = 120/190 (63.16%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+N+  H+ DG+LDL  LE TV TAMRMLDNVIDINYYPT EA NSN RHRPVG+G+MGFQDAL   GI YAS  AVEFAD SMEAISYFA+ ASSELA ERG Y SY GS                                               +NVMAIAPTATISTI+GV QSIEPSYK
Sbjct:   85 VCNLGSINIAAHVRDGKLDLEQLEITVTTAMRMLDNVIDINYYPTKEAENSNRRHRPVGMGLMGFQDALFRLGIGYASDAAVEFADRSMEAISYFALKASSELAAERGTYSSYIGSKWDRGLLPIDTIELLEQERGCAVDLDRSTTLDWDVIRQSIRKNGMRNSNVMAIAPTATISTIVGVCQSIEPSYK 274          
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Match: A0A5C5XPJ3_9PLAN (Ribonucleoside-diphosphate reductase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A5C5XPJ3_9PLAN)

HSP 1 Score: 197 bits (500), Expect = 7.470e-56
Identity = 113/190 (59.47%), Postives = 127/190 (66.84%), Query Frame = 0
Query:    1 VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARNSNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILASSELAGERGRYGSYHGS-----------------------------------------------NNVMAIAPTATISTIIGVSQSIEPSYK 143
            VCNLGS+NLK+H+ DG+ DL ML+ETV  AMRMLDNVIDIN+YPT +A N+N RHRPVGLGVMGFQDALLAQG+SY+S  AVEFAD SMEAISY AILASS+LA ERG+Y +Y GS                                               +N MAIAPTATISTIIGVSQSIEPSYK
Sbjct:  578 VCNLGSINLKVHVRDGKFDLDMLQETVTIAMRMLDNVIDINFYPTDQAANANKRHRPVGLGVMGFQDALLAQGLSYSSDAAVEFADRSMEAISYHAILASSQLAKERGQYSTYEGSKWDRGLLPIDTLAVLEAERGQAIDVDRSASLDWTPVRESVAKYGMRNSNCMAIAPTATISTIIGVSQSIEPSYK 767          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98994.22773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0AM00_9PLAN2.430e-7572.63Ribonucleoside-diphosphate reductase subunit alpha... [more]
A0A517Q244_9PLAN1.130e-7373.68Ribonucleoside-diphosphate reductase n=20 Tax=Plan... [more]
UPI001EE7FEFF1.770e-5862.11ribonucleoside-diphosphate reductase subunit alpha... [more]
A0A3B9D2Y0_9PLAN3.520e-5862.11Ribonucleoside-diphosphate reductase n=1 Tax=Planc... [more]
A0A1P8WJY5_9PLAN6.680e-5861.58Ribonucleoside-diphosphate reductase n=1 Tax=Fuers... [more]
F0SJS0_RUBBR8.740e-5861.58Ribonucleoside-diphosphate reductase n=3 Tax=Planc... [more]
A0A8J3HVI6_9CHLR2.020e-5658.95Ribonucleoside-diphosphate reductase n=1 Tax=Ktedo... [more]
A0A3C1QZW4_9PLAN2.540e-5660.00Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
A0A7Z9LZ33_9PLAN5.720e-5658.42Ribonucleoside-diphosphate reductase subunit alpha... [more]
A0A5C5XPJ3_9PLAN7.470e-5659.47Ribonucleoside-diphosphate reductase n=3 Tax=Planc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000788Ribonucleotide reductase large subunit, C-terminalPRINTSPR01183RIBORDTASEM1coord: 18..41
score: 32.28
coord: 56..78
score: 39.34
coord: 84..107
score: 32.94
IPR000788Ribonucleotide reductase large subunit, C-terminalPFAMPF02867Ribonuc_red_lgCcoord: 1..117
e-value: 2.7E-35
score: 121.9
NoneNo IPR availableGENE3D3.20.70.20coord: 1..143
e-value: 1.3E-49
score: 171.2
NoneNo IPR availablePANTHERPTHR11573:SF6RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE SUBUNITcoord: 1..117
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 1..142
IPR039718Ribonucleoside-diphosphate reductase large subunitPANTHERPTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINcoord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98994contigM-pyrifera_M_contig98994:122..691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98994.22773.1mRNA_M-pyrifera_M_contig98994.22773.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98994 122..691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98994.22773.1 ID=prot_M-pyrifera_M_contig98994.22773.1|Name=mRNA_M-pyrifera_M_contig98994.22773.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
VCNLGSVNLKLHIVDGQLDLGMLEETVRTAMRMLDNVIDINYYPTAEARN
SNTRHRPVGLGVMGFQDALLAQGISYASMQAVEFADASMEAISYFAILAS
SELAGERGRYGSYHGSNNVMAIAPTATISTIIGVSQSIEPSYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000788RNR_lg_C
IPR039718Rrm1