prot_M-pyrifera_M_contig98766.22729.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98766.22729.1
Unique Nameprot_M-pyrifera_M_contig98766.22729.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length135
Homology
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BLAST of mRNA_M-pyrifera_M_contig98766.22729.1 vs. uniprot
Match: A0A8G1J3N8_9ACTN (Uncharacterized protein n=1 Tax=Glycomyces sp. TRM65418 TaxID=2867006 RepID=A0A8G1J3N8_9ACTN)

HSP 1 Score: 54.7 bits (130), Expect = 4.490e-6
Identity = 45/151 (29.80%), Postives = 69/151 (45.70%), Query Frame = 0 
Query:    3 VLPSGSTSRGTAVTPLHDVDFLVVPEGDL----------AFETPEQFIKYVGSRMGEALGQEAA------WQTRSVKVRLEDTD------VDLVPVLKVEDGVYRLADRSCKDKDWPITKPHVQARILAELDHKDKANGRAAKCCRLVKAW 131
            V+PSGS +RGT   P+HDVD ++V +GD           A E  +   + V   +G + G  A       W+  +VK  L+D D      VD +P L+ ED   +L       +DW +  P     ++AE+  K     + A   R++K W
Sbjct:   44 VIPSGSLARGTHKDPIHDVDVILVFDGDARPGWGEPGASAAEALDHTRERVHQLLGTSEGTSAQVVRLARWRNHAVKCFLDDPDDPAAFTVDAMPALRRED---KLLVPEALSEDWILCDPES---LIAEVAEKHGEWNKFAGSVRMLKWW 188
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98766.22729.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8G1J3N8_9ACTN4.490e-629.80Uncharacterized protein n=1 Tax=Glycomyces sp. TRM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF18144SMODScoord: 4..105
e-value: 9.2E-10
score: 38.9
NoneNo IPR availableGENE3D3.30.460.10coord: 1..100
e-value: 1.0E-8
score: 37.1
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 4..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98766contigM-pyrifera_M_contig98766:23..427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98766.22729.1mRNA_M-pyrifera_M_contig98766.22729.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98766 23..427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98766.22729.1 ID=prot_M-pyrifera_M_contig98766.22729.1|Name=mRNA_M-pyrifera_M_contig98766.22729.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=135bp
ATVLPSGSTSRGTAVTPLHDVDFLVVPEGDLAFETPEQFIKYVGSRMGEA
LGQEAAWQTRSVKVRLEDTDVDLVPVLKVEDGVYRLADRSCKDKDWPITK
PHVQARILAELDHKDKANGRAAKCCRLVKAWNRTL
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