prot_M-pyrifera_M_contig98758.22727.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98758.22727.1
Unique Nameprot_M-pyrifera_M_contig98758.22727.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length154
Homology
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BLAST of mRNA_M-pyrifera_M_contig98758.22727.1 vs. uniprot
Match: A0A8J4V0J3_9MYCE (Rho-GAP domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V0J3_9MYCE)

HSP 1 Score: 68.9 bits (167), Expect = 1.050e-10
Identity = 49/167 (29.34%), Postives = 84/167 (50.30%), Query Frame = 0 
Query:    5 LYRKLFGHKKSVVAVQLTEDKQHLWTGDSAGILRVWDTTTLKLRHEVELGKRINAMVLAAGN--MWIGLADSIQIRDQNDVSDLICEIENAPTYNLCVVG-DQVWVGDAGKLIIYDVDAF--------MGEPVDV-----GALPVCLTAVG-DAVWGACADRKIRVW 154
            L  KL GHKKS+  + LT+ +Q +W+ DS G  R+WD+ T +   E ++ +     +++A N  +W     S++I D N    LI EI    +Y+LC     ++WVG A  L IY+++          + +P+       G   + +  V  + +WG  ++R + VW
Sbjct:  374 LNAKLLGHKKSIQWMVLTDKQQKVWSLDSYGNCRIWDSQTHQFIKEFQICEGAVYQMISASNNTVWTATGKSVKIWDAN--GGLIGEIPGE-SYSLCESQYGEIWVGSAQVLNIYNLEDVPTVANPDELFKPIGTDLFMKGTFILAMCRVSSNRIWGCSSERSLFVW 537
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BLAST of mRNA_M-pyrifera_M_contig98758.22727.1 vs. uniprot
Match: A0A151Z559_9MYCE (RhoGAP domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z559_9MYCE)

HSP 1 Score: 58.5 bits (140), Expect = 4.260e-7
Identity = 47/182 (25.82%), Postives = 76/182 (41.76%), Query Frame = 0 
Query:    5 LYRKLFGHKKSVVAVQLTEDKQHLWTGDSAGILRVWDTTTLKLRHEVEL---------GKRINAMVLAAGNMWIGLADSIQIRDQNDVSDLICEIENAPTYNLCVVG-DQVWVGDAGKLIIYDVDAF----------------MGEPVDV-----GALPVCLTAVGDA-VWGACADRKIRVW 154
            L  KL  HKKSV  +   + +Q +W+ DS G ++VWD+   KL  E+ +         G      V +   +W   + S  I D ++   LI  +     Y+LC     Q+WVG A  + IYD+D                     P+       G   + +  VG + +WG  +D+ + +W
Sbjct:  351 LISKLLSHKKSVQMMVCCDKEQKVWSLDSIGSVKVWDSQNRKLIEELSVFGSEDEQNTGAVYQMTVSSNDCIWTATSLSTSIWDSSNCK-LIARVPGE-AYSLCESQFKQMWVGGAQVINIYDIDDLPKNASAQTPDVRASTDFSRPISTDIFMKGVYILAMAKVGASKIWGCSSDKTLYIW 530
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98758.22727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A8J4V0J3_9MYCE1.050e-1029.34Rho-GAP domain-containing protein n=1 Tax=Polyspho... [more]
A0A151Z559_9MYCE4.260e-725.82RhoGAP domain-containing protein n=1 Tax=Tieghemos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 2..41
e-value: 0.0024
score: 27.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 9..50
score: 11.043
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..120
e-value: 3.4E-9
score: 38.6
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 9..50
score: 10.575
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 9..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98758contigM-pyrifera_M_contig98758:25..537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98758.22727.1mRNA_M-pyrifera_M_contig98758.22727.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98758 25..537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98758.22727.1 ID=prot_M-pyrifera_M_contig98758.22727.1|Name=mRNA_M-pyrifera_M_contig98758.22727.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
PTAILYRKLFGHKKSVVAVQLTEDKQHLWTGDSAGILRVWDTTTLKLRHE
VELGKRINAMVLAAGNMWIGLADSIQIRDQNDVSDLICEIENAPTYNLCV
VGDQVWVGDAGKLIIYDVDAFMGEPVDVGALPVCLTAVGDAVWGACADRK
IRVW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam