prot_M-pyrifera_M_contig98746.22723.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98746.22723.1
Unique Nameprot_M-pyrifera_M_contig98746.22723.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length59
Homology
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: D7G1U3_ECTSI (Aminomethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 6.650e-26
Identity = 51/58 (87.93%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYKP 58
            G ITSGTFSPCLKKPVAMGYVET HAKN T VML IRNKMVPT +TAMPFLETSYYKP
Sbjct:  362 GTITSGTFSPCLKKPVAMGYVETAHAKNGTDVMLKIRNKMVPTAVTAMPFLETSYYKP 419          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A836CJF5_9STRA (Aminomethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJF5_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.090e-19
Identity = 37/58 (63.79%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYKP 58
            G+ITSGTFSPCLK+P+AMGYV   H+K +TPVML++R K+ P V+++MPF+ET Y+KP
Sbjct:  357 GEITSGTFSPCLKRPLAMGYVAAEHSKTDTPVMLSVRGKLQPAVVSSMPFVETRYFKP 414          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A1E7ELI0_9STRA (Aminomethyltransferase n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ELI0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.100e-18
Identity = 37/57 (64.91%), Postives = 49/57 (85.96%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G+ITSGTFSPCLKKP+AMGY++T  +KN+TP+ L IRNKMV   +T MPF+E++YY+
Sbjct:  370 GEITSGTFSPCLKKPIAMGYIDTIMSKNDTPIKLKIRNKMVDAHVTKMPFVESNYYR 426          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A7S3PZL6_9STRA (Aminomethyltransferase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZL6_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.890e-17
Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G+ITSGTFSPCLKKP+AMGYVET + KN T VM+ IRNKM    +T MPF+E+ YY+
Sbjct:  360 GEITSGTFSPCLKKPIAMGYVETGNHKNGTEVMIKIRNKMQKAAVTKMPFVESHYYR 416          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: B7S451_PHATC (Aminomethyltransferase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S451_PHATC)

HSP 1 Score: 82.8 bits (203), Expect = 3.610e-17
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G++TSGTFSPCLK P+AMGYVET  AK  TP+ML IRNKM    IT MPF+E+ YY+
Sbjct:  362 GEVTSGTFSPCLKAPIAMGYVETASAKAGTPIMLKIRNKMQKAEITKMPFVESRYYR 418          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A7S1Y9F6_9STRA (Aminomethyltransferase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9F6_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.250e-16
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G++TSGTFSP LKKP+AMGYVET  AK  T VM+ +RNKM P  +T MPF+E+ YY+
Sbjct:  352 GEVTSGTFSPSLKKPIAMGYVETKSAKAGTDVMIKVRNKMQPAQVTKMPFVESRYYR 408          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A7S0UNH9_9STRA (Aminomethyltransferase n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UNH9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.910e-16
Identity = 36/57 (63.16%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G++TSGTFSPCLKKP+AMGYV+T  AKN T + L IRNKM    +T MPF+E+ YY+
Sbjct:  319 GEVTSGTFSPCLKKPIAMGYVDTALAKNGTGLQLKIRNKMQAAEVTKMPFVESRYYR 375          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A7S2HI00_9STRA (Aminomethyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HI00_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.250e-16
Identity = 37/57 (64.91%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G+ITSGTFSPCLKKP+AMGYVET  AK  T VM+ IRNKM    +  MPF+E+ YY+
Sbjct:  357 GEITSGTFSPCLKKPIAMGYVETKSAKAGTEVMVKIRNKMQKAEVVKMPFVESRYYR 413          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A1Z5JTI5_FISSO (Aminomethyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTI5_FISSO)

HSP 1 Score: 77.8 bits (190), Expect = 2.160e-15
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G +TSGTFSPCLKKP+AMGYV T  AK  T + L IR+KM   V+T MPF+ET Y+K
Sbjct:  347 GHVTSGTFSPCLKKPIAMGYVTTEFAKVGTEIQLKIRDKMQNAVVTKMPFVETKYFK 403          
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Match: A0A7S4K6X5_9STRA (Aminomethyltransferase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K6X5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 5.890e-15
Identity = 37/57 (64.91%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    1 GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPFLETSYYK 57
            G ITSGTFSPCLK P+AMGYVET  AK  T V L IRNKM    +T MPF+E+ YY+
Sbjct:  367 GTITSGTFSPCLKAPIAMGYVETKSAKAGTEVTLKIRNKMQKAEVTKMPFVESRYYR 423          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98746.22723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U3_ECTSI6.650e-2687.93Aminomethyltransferase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A836CJF5_9STRA2.090e-1963.79Aminomethyltransferase n=1 Tax=Tribonema minus Tax... [more]
A0A1E7ELI0_9STRA2.100e-1864.91Aminomethyltransferase n=2 Tax=Fragilariopsis cyli... [more]
A0A7S3PZL6_9STRA1.890e-1766.67Aminomethyltransferase n=1 Tax=Chaetoceros debilis... [more]
B7S451_PHATC3.610e-1766.67Aminomethyltransferase n=1 Tax=Phaeodactylum trico... [more]
A0A7S1Y9F6_9STRA3.250e-1663.16Aminomethyltransferase n=1 Tax=Grammatophora ocean... [more]
A0A7S0UNH9_9STRA3.910e-1663.16Aminomethyltransferase n=1 Tax=Pseudo-nitzschia de... [more]
A0A7S2HI00_9STRA6.250e-1664.91Aminomethyltransferase n=1 Tax=Helicotheca tamesis... [more]
A0A1Z5JTI5_FISSO2.160e-1563.16Aminomethyltransferase n=2 Tax=Fistulifera solaris... [more]
A0A7S4K6X5_9STRA5.890e-1564.91Aminomethyltransferase n=2 Tax=Odontella aurita Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013977Glycine cleavage T-protein, C-terminal barrel domainPFAMPF08669GCV_T_Ccoord: 1..50
e-value: 1.9E-13
score: 50.1
NoneNo IPR availableGENE3D2.40.30.110coord: 1..53
e-value: 7.2E-17
score: 63.0
NoneNo IPR availablePANTHERPTHR43757FAMILY NOT NAMEDcoord: 1..58
NoneNo IPR availablePANTHERPTHR43757:SF2AMINOMETHYLTRANSFERASE-RELATEDcoord: 1..58
IPR029043Glycine cleavage T-protein/YgfZ, C-terminalSUPERFAMILY101790Aminomethyltransferase beta-barrel domaincoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98746contigM-pyrifera_M_contig98746:407..583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98746.22723.1mRNA_M-pyrifera_M_contig98746.22723.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98746 407..583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98746.22723.1 ID=prot_M-pyrifera_M_contig98746.22723.1|Name=mRNA_M-pyrifera_M_contig98746.22723.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=59bp
GQITSGTFSPCLKKPVAMGYVETPHAKNETPVMLNIRNKMVPTVITAMPF
LETSYYKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013977GCV_T_C
IPR029043GcvT/YgfZ_C