prot_M-pyrifera_M_contig98200.22615.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98200.22615.1
Unique Nameprot_M-pyrifera_M_contig98200.22615.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
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BLAST of mRNA_M-pyrifera_M_contig98200.22615.1 vs. uniprot
Match: A0A0D2W1H9_CAPO3 (DNA-dependent protein kinase catalytic subunit n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2W1H9_CAPO3)

HSP 1 Score: 56.2 bits (134), Expect = 1.350e-6
Identity = 36/108 (33.33%), Postives = 53/108 (49.07%), Query Frame = 0 
Query:    1 ELARRCVSGILHAAALGSSAAADRLPRAMELATEGDEGGDGSGDGASAAFSRHWRTVPTWRFLRWRGQMLALLPRAGSACLSSAVLDAARRYPAAMVHPFMISSEQLS 108
             L +  V  +L A ALGS  A D  PR ++L  +        G+     F      VP+W F+RW  Q++A+L +     LS  + +    YP A+V+PF +S EQ S
Sbjct: 4136 HLPKLIVENVLKAMALGSPDARDSFPRLLQLLAQFGSSSPELGN----LFKDLSEKVPSWMFIRWIAQIVAVLDKPEGLSLSRILKNLCLNYPQAIVYPFFLSCEQFS 4239
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BLAST of mRNA_M-pyrifera_M_contig98200.22615.1 vs. uniprot
Match: UPI001EE63446 (LOW QUALITY PROTEIN: DNA-dependent protein kinase catalytic subunit-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE63446)

HSP 1 Score: 55.1 bits (131), Expect = 3.400e-6
Identity = 34/96 (35.42%), Postives = 48/96 (50.00%), Query Frame = 0 
Query:   10 ILHAAALGSSAAADRLPRAMELATEGDEGGDGSGDGASAAFSRHWRTVPTWRFLRWRGQMLALLPRAGSACLSSAVLDAARRYPAAMVHPFMISSE 105
            +L A  LGS  A +R PR M+L     E          A F    + VP+W F+ W  QM+ALL +  +  +   V+  A  YP A+++PF IS E
Sbjct: 3663 MLKAMKLGSVEARERFPRLMQLVEYYPE--------TMATFREKSQEVPSWMFILWLAQMMALLDKKEAPAVQPIVISLATDYPQAVIYPFRISCE 3750
[Close]
BLAST of mRNA_M-pyrifera_M_contig98200.22615.1 vs. uniprot
Match: UPI000D73311F (DNA-dependent protein kinase catalytic subunit-like n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73311F)

HSP 1 Score: 51.2 bits (121), Expect = 7.500e-5
Identity = 32/99 (32.32%), Postives = 49/99 (49.49%), Query Frame = 0 
Query:    7 VSGILHAAALGSSAAADRLPRAMELATEGDEGGDGSGDGASAAFSRHWRTVPTWRFLRWRGQMLALLPRAGSACLSSAVLDAARRYPAAMVHPFMISSE 105
            V  +L A   GS+ A +R PR + +     +  D         F +   T+P+W F+ W  QM+ALL +  +  +   +L  A  YP A+V+PF IS E
Sbjct: 3425 VKCLLDAMRAGSAEALERFPRLLHIIEHYPDTTD--------MFLKKSETIPSWMFILWISQMMALLDKHQAHAVRPIILRIATEYPQAIVYPFHISQE 3515
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98200.22615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0D2W1H9_CAPO31.350e-633.33DNA-dependent protein kinase catalytic subunit n=2... [more]
UPI001EE634463.400e-635.42LOW QUALITY PROTEIN: DNA-dependent protein kinase ... [more]
UPI000D73311F7.500e-532.32DNA-dependent protein kinase catalytic subunit-lik... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98200contigM-pyrifera_M_contig98200:26..406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98200.22615.1mRNA_M-pyrifera_M_contig98200.22615.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98200 26..406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98200.22615.1 ID=prot_M-pyrifera_M_contig98200.22615.1|Name=mRNA_M-pyrifera_M_contig98200.22615.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
ELARRCVSGILHAAALGSSAAADRLPRAMELATEGDEGGDGSGDGASAAF
SRHWRTVPTWRFLRWRGQMLALLPRAGSACLSSAVLDAARRYPAAMVHPF
MISSEQLSSSSGAASAVAARLGAMLRE
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