prot_M-pyrifera_M_contig98108.22595.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98108.22595.1
Unique Nameprot_M-pyrifera_M_contig98108.22595.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length138
Homology
BLAST of mRNA_M-pyrifera_M_contig98108.22595.1 vs. uniprot
Match: A0A5A8EKK4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EKK4_CAFRO)

HSP 1 Score: 56.2 bits (134), Expect = 1.870e-6
Identity = 42/146 (28.77%), Postives = 67/146 (45.89%), Query Frame = 0
Query:    1 PTITSITPTTLLPGESSLEVTLCGSNFPPRQVDLDVVEFGGIECEDA-VVESGCVRCPGLITPGATKSSFSAWPSIGERIVVGGREALSFYGTYV-----PLPDITSISPQ--SSKPGSVITINGGGFGVEDGDVSKAWVGGQECE 138
            PT+++ +P+ LLPG   L +TL G N   R  D+  +  G  +C    V+    VRC GL+           W      +V   R   +FY         PL  ++  +P   S+  G+++T++G GFG    D+ +  +GGQ  E
Sbjct: 2529 PTLSTSSPSYLLPGPRHLNMTLNGDNLASRPADILALFIGPSQCPLVEVLPPSTVRCIGLV-----------WDRAAATVVELRRADSTFYLQVPGLESQPLMSLSRAAPSVISTTGGTLVTLSGSGFGQSTLDIDQVKIGGQPAE 2663          
BLAST of mRNA_M-pyrifera_M_contig98108.22595.1 vs. uniprot
Match: A0A534A7V9_9GAMM (Phospholipase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A534A7V9_9GAMM)

HSP 1 Score: 52.4 bits (124), Expect = 3.760e-5
Identity = 41/136 (30.15%), Postives = 59/136 (43.38%), Query Frame = 0
Query:    1 PTITSITPTTLLPGESSLEVTLCGSNFPPRQVDLDVVEFGGIECEDAVVESGCVRCPGLITPGATKSSFSAWPSIGERIVVGGREALSFYGTYV---PLPDITSISPQSSKPGSVITINGGGFGVEDGDVSKAWVG 133
            PTITS TPT    G     VT+ G+NF    +  +VV F G     +   S  +     +   AT    +   S  +  +  G ++++  G Y    P P ITS SP S  P +V+TI G  FG +        +G
Sbjct:  532 PTITSFTPTVDPVGTV---VTITGTNFDGNTLSNNVVSFNGAAVTPSAATSTTLTA--TVPSNATTGPITVTVSSSQLYI--GSQSVTSTGAYTVGYPQPTITSFSPTSGGPATVVTITGTNFGTDPQGAGSVTMG 660          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98108.22595.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5A8EKK4_CAFRO1.870e-628.77Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A534A7V9_9GAMM3.760e-530.15Phospholipase (Fragment) n=1 Tax=Gammaproteobacter... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002909IPT domainPFAMPF01833TIGcoord: 1..56
e-value: 7.2E-5
score: 22.8
coord: 97..137
e-value: 1.4E-5
score: 25.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..68
e-value: 6.9E-6
score: 28.1
coord: 92..138
e-value: 1.8E-7
score: 33.2
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 94..137
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98108contigM-pyrifera_M_contig98108:271..684 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98108.22595.1mRNA_M-pyrifera_M_contig98108.22595.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98108 271..684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98108.22595.1 ID=prot_M-pyrifera_M_contig98108.22595.1|Name=mRNA_M-pyrifera_M_contig98108.22595.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
PTITSITPTTLLPGESSLEVTLCGSNFPPRQVDLDVVEFGGIECEDAVVE
SGCVRCPGLITPGATKSSFSAWPSIGERIVVGGREALSFYGTYVPLPDIT
SISPQSSKPGSVITINGGGFGVEDGDVSKAWVGGQECE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002909IPT_dom
IPR013783Ig-like_fold
IPR014756Ig_E-set