prot_M-pyrifera_M_contig98095.22588.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig98095.22588.1
Unique Name	prot_M-pyrifera_M_contig98095.22588.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	120

Homology

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: UPI001E1DC257 (DDB1- and CUL4-associated factor 13-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC257)

HSP 1 Score: 147 bits (371), Expect = 4.900e-40
Identity = 72/120 (60.00%), Postives = 90/120 (75.00%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F+F V +ED N Y+FD+RKLS    +H  HV AVMD+ +SPTGTE V+GS+D T+RIF    +RSR+VYH +RMQRV  VRWS D+KYI SGS E NIRVWKARA+E+I  L A+E
Sbjct:  247 PMEAFIFTVANEDYNLYSFDIRKLSMPLTIHKDHVSAVMDLDYSPTGTEFVSGSFDKTIRIFTCGQQRSREVYHTKRMQRVSVVRWSLDNKYILSGSMEMNIRVWKARASEKIGVLKARE 366

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: K1QGW5_CRAGI (DDB1- and CUL4-associated factor 13 n=2 Tax=Crassostrea TaxID=6564 RepID=K1QGW5_CRAGI)

HSP 1 Score: 145 bits (365), Expect = 3.700e-39
Identity = 72/120 (60.00%), Postives = 87/120 (72.50%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  SF+F   SED N YTFD+RKLS   ++H  HV AVMDV +SPTG ELV+  YD  LRIF     RSR++YH +RMQRV  V+WS D+KYI SGSDE NIRVWKARA+E++  LS +E
Sbjct:  247 PMESFVFTAASEDYNLYTFDMRKLSAPIMMHMDHVAAVMDVDYSPTGKELVSAGYDKCLRIFSVDTSRSREIYHTKRMQRVRVVQWSLDNKYIISGSDEMNIRVWKARASEKLGMLSTRE 366

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: A0A8I6TL15_CIMLE (DDB1- and CUL4-associated factor 13 n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TL15_CIMLE)

HSP 1 Score: 144 bits (364), Expect = 5.180e-39
Identity = 67/120 (55.83%), Postives = 88/120 (73.33%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  ++ + V +ED N YTFD+R+LS A  +H GH+ AV+ V +SPTG E+V+GSYD T+RIFG     SRDVYH +RMQR+  V WSADDKYI S SDE N+R+WKARA+E++  L  +E
Sbjct:  248 PMEAYTYTVANEDYNLYTFDMRRLSSAVTIHKGHISAVIAVDYSPTGLEIVSGSYDRTIRIFGNDKSNSRDVYHTKRMQRITNVLWSADDKYILSSSDEMNVRIWKARASEKLGVLKPRE 367

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: UPI0005D0B116 (DDB1- and CUL4-associated factor 13 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0005D0B116)

HSP 1 Score: 144 bits (364), Expect = 5.440e-39
Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F+F V +ED N YTFDVRKL +   +H GH  AV+DV ++PTG ELV GSYD T+RIF +    SRDVYH +RMQR+  V+WS D+KYI SGSDE NIR+WKARAAE++  L  +E
Sbjct:  250 PMEAFIFTVANEDYNLYTFDVRKLGQPVNIHMGHTSAVVDVDYAPTGRELVAGSYDKTVRIFESLKGHSRDVYHTKRMQRLTCVKWSLDNKYILSGSDEMNIRMWKARAAEKLGVLKPRE 369

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: A0A4Y7NIC2_9CRUS (DDB1- and CUL4-associated factor 13 n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NIC2_9CRUS)

HSP 1 Score: 144 bits (363), Expect = 7.250e-39
Identity = 69/120 (57.50%), Postives = 87/120 (72.50%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F+F V +ED N YTFD+RKL E   +H  HV AV+DV +SPTG ELV+ SYD T+RI+      SRDVYH +RMQR+  V WS DDKYI+SGSDE NIR+WKARAAE++  +  +E
Sbjct:  248 PMEAFIFTVANEDYNLYTFDMRKLDEPINIHRDHVSAVIDVDYSPTGKELVSASYDKTIRIYETNKTHSRDVYHTKRMQRLTCVSWSLDDKYIYSGSDEMNIRIWKARAAEKLGVVKPRE 367

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: A0A6P4ZG13_BRABE (DDB1- and CUL4-associated factor 13 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZG13_BRABE)

HSP 1 Score: 144 bits (363), Expect = 7.490e-39
Identity = 65/120 (54.17%), Postives = 92/120 (76.67%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F+F V +ED+N Y+FD+R+L+    +H  HV AV+D+ +SPTG E V+GS+D T+RIF  +  RSR+VYH +RMQRVF ++WS D+KYI SGSDE N+R+WKA+AAE+I  L+ +E
Sbjct:  249 PMEAFVFTVANEDHNLYSFDIRRLTSPFNIHMDHVNAVLDLDYSPTGREFVSGSFDKTIRIFPLEKGRSREVYHTKRMQRVFCIKWSLDNKYILSGSDETNVRIWKAKAAEKIGKLTPRE 368

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: F2USP9_SALR5 (DDB1- and CUL4-associated factor 13 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2USP9_SALR5)

HSP 1 Score: 144 bits (363), Expect = 1.910e-38
Identity = 68/117 (58.12%), Postives = 87/117 (74.36%), Query Frame = 0

Query:    4 SFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            +F F V +ED+N YTFD+RK+  A + H  HV AVMD+++SPTG E  T SYDC+LRIF  +   SR+VYH +RMQRVF V+W+ D+KYI SGSDE NIRVWKA A E+I   SA++
Sbjct:  245 AFNFTVANEDHNCYTFDMRKMKRALMAHQDHVSAVMDISYSPTGREFATASYDCSLRIFDHRSGHSREVYHTKRMQRVFCVKWANDNKYITSGSDETNIRVWKATAWEKIGTQSARQ 361

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: A0A6F9DB68_9ASCI (DDB1- and CUL4-associated factor 13 n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DB68_9ASCI)

HSP 1 Score: 143 bits (360), Expect = 2.190e-38
Identity = 65/120 (54.17%), Postives = 91/120 (75.83%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F+F   +ED+N YTFD+R L+ A  VH  H  AV+DV ++PTG E V+GSYD ++RIF +   RSRDVYH +RMQRVF V+WS+D++Y+ SGSDE N+R+WKARA+E++  L+ +E
Sbjct:  247 PMEAFVFTAANEDHNLYTFDMRNLNFAMNVHTDHADAVLDVDYAPTGKEFVSGSYDRSIRIFPSNRSRSRDVYHTKRMQRVFCVKWSSDNRYLLSGSDETNVRIWKARASEKLGTLTPRE 366

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: UPI0018858505 (DDB1- and CUL4-associated factor 13-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI0018858505)

HSP 1 Score: 142 bits (359), Expect = 2.830e-38
Identity = 67/120 (55.83%), Postives = 87/120 (72.50%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F+F   +ED N Y++D+R+L    V+H  HV AV+DV +SPTG E V+G YD TLRIFGA+   SRD+YH RRMQRV  V WS DDKY+ SGSDE N+R+WKARA+E++  L  +E
Sbjct:  248 PMEAFVFTAANEDYNLYSWDMRRLRRPLVIHKDHVSAVIDVDYSPTGREFVSGGYDKTLRIFGAREAHSRDIYHTRRMQRVACVCWSGDDKYVLSGSDEMNVRLWKARASEKLGVLKERE 367

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BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Match: A0A2T0FEH7_9ASCO (DDB1- and CUL4-associated factor 13 n=1 Tax=Wickerhamiella sorbophila TaxID=45607 RepID=A0A2T0FEH7_9ASCO)

HSP 1 Score: 142 bits (359), Expect = 2.870e-38
Identity = 72/120 (60.00%), Postives = 88/120 (73.33%), Query Frame = 0

Query:    1 PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTELVTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEANIRVWKARAAERIAPLSAKE 120
            P  +F F VGSED+NAY +D+R L  A  V+  HV AVMDV FSPTG ELVTGSYD T+RIF  Q   SRD+YH +RMQRVF+VR+S D KYI SGSD+ N+RVW+A A ER +  S ++
Sbjct:  244 PMEAFNFAVGSEDHNAYLYDMRNLKRALNVYKDHVAAVMDVDFSPTGQELVTGSYDRTIRIFKLQEGHSRDIYHTKRMQRVFSVRYSMDSKYILSGSDDGNVRVWRANANERSSVKSTRQ 363

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig98095.22588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001E1DC257	4.900e-40	60.00	DDB1- and CUL4-associated factor 13-like n=1 Tax=M...	[more]
K1QGW5_CRAGI	3.700e-39	60.00	DDB1- and CUL4-associated factor 13 n=2 Tax=Crasso...	[more]
A0A8I6TL15_CIMLE	5.180e-39	55.83	DDB1- and CUL4-associated factor 13 n=1 Tax=Cimex ...	[more]
UPI0005D0B116	5.440e-39	58.33	DDB1- and CUL4-associated factor 13 n=1 Tax=Plutel...	[more]
A0A4Y7NIC2_9CRUS	7.250e-39	57.50	DDB1- and CUL4-associated factor 13 n=1 Tax=Moina ...	[more]
A0A6P4ZG13_BRABE	7.490e-39	54.17	DDB1- and CUL4-associated factor 13 n=3 Tax=Branch...	[more]
F2USP9_SALR5	1.910e-38	58.12	DDB1- and CUL4-associated factor 13 n=1 Tax=Salpin...	[more]
A0A6F9DB68_9ASCI	2.190e-38	54.17	DDB1- and CUL4-associated factor 13 n=1 Tax=Phallu...	[more]
UPI0018858505	2.830e-38	55.83	DDB1- and CUL4-associated factor 13-like n=1 Tax=P...	[more]
A0A2T0FEH7_9ASCO	2.870e-38	60.00	DDB1- and CUL4-associated factor 13 n=1 Tax=Wicker...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 71..106 e-value: 0.023 score: 23.9 coord: 23..63 e-value: 1.8E-5 score: 34.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 81..106 e-value: 0.0052 score: 17.6 coord: 32..62 e-value: 5.1E-6 score: 27.1
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 31..62 score: 10.542
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 81..115 score: 10.408
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 1..120 e-value: 6.3E-22 score: 79.9
None	No IPR available	PANTHER	PTHR22851	U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN	coord: 3..120
None	No IPR available	PANTHER	PTHR22851:SF0	DDB1- AND CUL4-ASSOCIATED FACTOR 13	coord: 3..120
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 1..120 score: 17.06
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 9..110

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig98095	contig	M-pyrifera_M_contig98095:342..701 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig98095.22588.1	mRNA_M-pyrifera_M_contig98095.22588.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig98095 342..701 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig98095.22588.1 ID=prot_M-pyrifera_M_contig98095.22588.1|Name=mRNA_M-pyrifera_M_contig98095.22588.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
PFLSFLFPVGSEDNNAYTFDVRKLSEAAVVHGGHVKAVMDVAFSPTGTEL
VTGSYDCTLRIFGAQMRRSRDVYHLRRMQRVFAVRWSADDKYIFSGSDEA
NIRVWKARAAERIAPLSAKE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR011047	Quinoprotein_ADH-like_supfam