prot_M-pyrifera_M_contig9805.22575.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9805.22575.1
Unique Nameprot_M-pyrifera_M_contig9805.22575.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length251
Homology
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BLAST of mRNA_M-pyrifera_M_contig9805.22575.1 vs. uniprot
Match: A0A6H5JA01_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA01_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 9.120e-42
Identity = 143/250 (57.20%), Postives = 165/250 (66.00%), Query Frame = 0 
Query:    1 MPRSTAWLVFLSLAIASCKASAAAYD---SSPPAAASSAFVSYVPVTASFNHLSRAGITFRRAIPGSRPDSRGAKLGWVARRRGSLLP--PVNAEADDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AGSSIKDAISAFSKGERDINKSDLEKLVKDKEATELKAAETRRADSARKAAKEKRQLMQQAKSEAILVAAAGAAVGLVGGGLGDGAFAGGDAPWAPPVGALALGGLAYTAATTVGFDSE 243
            MP   A L  LSL        AA      +SP   +++AFVS+VPVTASFN  SR     +RAIPG+RP+S    LG        LL   PV AE  D        XXXXXXXXXXXXXXXXXXX      AG SIK+AISAFSKGE  I KSDLEKLVK+KEA EL+AAE R+A++ R+AA+ K Q+  + K +A++VA A A VGLV GGLGDGAFAGGDAPWAPPVGA+ALGGL Y AATT G   E
Sbjct:    1 MPGPAARLAVLSLLAGGTYCDAACPSGTRASPGHDSAAAFVSHVPVTASFNPFSRVRKAGKRAIPGTRPESDETTLGQALPGGRPLLSLTPVKAEGSDGAPPPPAPXXXXXXXXXXXXXXXXXXXPGEAPPAGGSIKEAISAFSKGE--IAKSDLEKLVKEKEAVELEAAEQRQAETLRQAAQAKAQVAAKEKMDALMVAGATATVGLVAGGLGDGAFAGGDAPWAPPVGAVALGGLGYAAATTDGVVGE 248
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9805.22575.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JA01_9PHAE9.120e-4257.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 148..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..18
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.812

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9805contigM-pyrifera_M_contig9805:564..10599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9805.22575.1mRNA_M-pyrifera_M_contig9805.22575.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9805 564..10599 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9805.22575.1 ID=prot_M-pyrifera_M_contig9805.22575.1|Name=mRNA_M-pyrifera_M_contig9805.22575.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=251bp
MPRSTAWLVFLSLAIASCKASAAAYDSSPPAAASSAFVSYVPVTASFNHL
SRAGITFRRAIPGSRPDSRGAKLGWVARRRGSLLPPVNAEADDSAAAAAG
AGAPKAGAPSQPPRVTPPPPPSPPAGSSIKDAISAFSKGERDINKSDLEK
LVKDKEATELKAAETRRADSARKAAKEKRQLMQQAKSEAILVAAAGAAVG
LVGGGLGDGAFAGGDAPWAPPVGALALGGLAYTAATTVGFDSETGGKGGG
G
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