prot_M-pyrifera_M_contig98011.22572.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig98011.22572.1
Unique Nameprot_M-pyrifera_M_contig98011.22572.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length140
Homology
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A358FY61_9ACTN (Flagellar motor switch protein FliN n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358FY61_9ACTN)

HSP 1 Score: 117 bits (293), Expect = 2.430e-30
Identity = 57/94 (60.64%), Postives = 74/94 (78.72%), Query Frame = 0
Query:   41 FQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGR 134
            F  E  +       DG+LS+GVLR VPLEV+AELG  ++++ EILQ   GS+IELDRTAG+P+DVV NGS++ARGEVVVI +EYG+R+TEI+GR
Sbjct:  110 FASEPHLTPTTGPSDGVLSIGVLRHVPLEVAAELGRAKVTMEEILQYGPGSIIELDRTAGSPVDVVVNGSMVARGEVVVIGEEYGVRVTEILGR 203          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A4Q7NW53_9ACTN (Flagellar motor switch protein FliN/FliY n=1 Tax=Motilibacter rhizosphaerae TaxID=598652 RepID=A0A4Q7NW53_9ACTN)

HSP 1 Score: 105 bits (261), Expect = 4.400e-25
Identity = 52/79 (65.82%), Postives = 67/79 (84.81%), Query Frame = 0
Query:   60 LGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDA 138
            L +LR+V +EV+AELG TR++V E+L LT GSV+ELDR AG+P D++ NG+LIARGEVVV+D+EYGIRITE+VG   DA
Sbjct:  168 LELLRDVVMEVTAELGRTRMTVRELLSLTPGSVVELDRAAGSPADLLVNGTLIARGEVVVVDEEYGIRITELVGPGADA 246          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A094ITD5_9GAMM (Flagellar motor switch protein FliN n=1 Tax=Pseudidiomarina salinarum TaxID=435908 RepID=A0A094ITD5_9GAMM)

HSP 1 Score: 101 bits (251), Expect = 8.560e-25
Identity = 50/102 (49.02%), Postives = 75/102 (73.53%), Query Frame = 0
Query:   31 SAPSLDEDLPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIV 132
            +AP+ D    F   + +DN AA G  +  L ++ ++P+++S ELG TR+++ ++L+L  GSV+ELD  AG P+D++ NG LIA+GEVVV+DD+YGIRITEIV
Sbjct:   28 AAPTSDSQKVF---KPLDNTAAAGGTMNDLDIIMDIPVKLSVELGRTRITIKQLLELAQGSVVELDGLAGEPMDILINGYLIAQGEVVVLDDKYGIRITEIV 126          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A346XUG4_9ACTN (Flagellar motor switch protein FliN n=1 Tax=Euzebya pacifica TaxID=1608957 RepID=A0A346XUG4_9ACTN)

HSP 1 Score: 105 bits (262), Expect = 1.840e-24
Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 0
Query:   51 AAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDA 138
            A  G G  S+ +L +V + V+AELG T+L+V ++L LT GS++ELDR AG+P+DVV NG+LIARGEVVVID+E+GIRITEI+G V  A
Sbjct:  256 ALPGQGQSSMSLLGDVEMGVTAELGRTQLTVRDVLNLTPGSIVELDRAAGSPVDVVVNGTLIARGEVVVIDEEFGIRITEILGAVEQA 343          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: UPI00196B79E3 (flagellar motor switch protein FliN n=1 Tax=Euzebya rosea TaxID=2052804 RepID=UPI00196B79E3)

HSP 1 Score: 105 bits (262), Expect = 2.000e-24
Identity = 53/88 (60.23%), Postives = 70/88 (79.55%), Query Frame = 0
Query:   51 AAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDA 138
            A  G G  S+ +L +V + V+AELG T+L+V ++L LT GS++ELDR AG+P+DVV NG+LIARGEVVVID+E+GIRITEI+G V  A
Sbjct:  262 ALPGQGQSSMSLLGDVEMGVTAELGRTQLTVRDVLNLTPGSIVELDRAAGSPVDVVVNGTLIARGEVVVIDEEFGIRITEILGAVEQA 349          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: U5WE98_9ACTN (Flagellar motor switch protein FliN n=6 Tax=Micromonosporaceae TaxID=28056 RepID=U5WE98_9ACTN)

HSP 1 Score: 102 bits (255), Expect = 3.280e-24
Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0
Query:   27 LVTASAPSLDEDLPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIV 132
            L  A +P   +  P  + RR D+   M  GL    +L +V +EVSAELG TR+SV E+L LT G+++ELDR AG+P D++ NG LIARGEVVVID+ +GIRITEI+
Sbjct:  140 LAMALSPWPSDGAPAGVARRGDSAGPMRGGL---DMLHDVEMEVSAELGRTRMSVRELLSLTPGAIVELDRAAGSPADLLVNGRLIARGEVVVIDENFGIRITEII 242          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A0D8HFH8_9ACTN (Flagellar motor switch protein FliN n=1 Tax=Acidithrix ferrooxidans TaxID=1280514 RepID=A0A0D8HFH8_9ACTN)

HSP 1 Score: 97.4 bits (241), Expect = 1.350e-23
Identity = 50/103 (48.54%), Postives = 71/103 (68.93%), Query Frame = 0
Query:   36 DEDLPFQMERRMDNDAAMGDGLLS----LGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGR 134
            D    F    +  N+  +G  L S    LGV++ V +E++ ELG  ++SV E+L LT G V+ELDR A +P+DV+ NG+L+AR EVVV++DE+GIRITE+VGR
Sbjct:    3 DISTDFSDTNQNGNENFLGKRLESDLGPLGVIQNVEMEITVELGRAKMSVRELLSLTSGDVVELDRLATSPVDVLVNGTLVARAEVVVVEDEFGIRITEVVGR 105          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A525C0N6_9GAMM (Flagellar motor switch protein FliN n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A525C0N6_9GAMM)

HSP 1 Score: 98.2 bits (243), Expect = 1.580e-23
Identity = 47/110 (42.73%), Postives = 74/110 (67.27%), Query Frame = 0
Query:   29 TASAPSLDED------LPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIV 132
            TA    +D D       P  ME  +    A GD  ++L V+ ++P+++S E+G TR+S+  +LQL  GS++ELDR AG P+DV+ NG+LIA GEVVV+++ +GIR+T+++
Sbjct:   23 TAEGDEIDPDEIMANVSPAPMENLVSETVAAGDEDVNLNVILDIPVDLSMEIGRTRISIRNLLQLNQGSIVELDRLAGEPLDVMVNGTLIAHGEVVVVNERFGIRLTDVI 132          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: A0A420XTQ3_9ACTN (Flagellar motor switch protein FliN/FliY n=1 Tax=Motilibacter peucedani TaxID=598650 RepID=A0A420XTQ3_9ACTN)

HSP 1 Score: 100 bits (250), Expect = 1.840e-23
Identity = 49/80 (61.25%), Postives = 66/80 (82.50%), Query Frame = 0
Query:   54 GDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVG 133
            G     L +LR+V +EV+AELG TR++V E+L L+ G+V+ELDR AG+P D++ NG+LIARGEVVV+D+EYGIRITE+VG
Sbjct:  162 GGRAAGLELLRDVEMEVTAELGRTRMTVRELLSLSPGAVVELDRAAGSPADLLVNGTLIARGEVVVVDEEYGIRITELVG 241          
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Match: UPI001BC9287F (flagellar motor switch protein FliN n=1 Tax=Bacillus sp. FJAT-29953 TaxID=1895007 RepID=UPI001BC9287F)

HSP 1 Score: 97.1 bits (240), Expect = 2.660e-23
Identity = 48/102 (47.06%), Postives = 74/102 (72.55%), Query Frame = 0
Query:   33 PSLDEDLPFQMERRMDNDAAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAGAPIDVVANGSLIARGEVVVIDDEYGIRITEIVGR 134
            P + +DLP + ++R  +D+      ++L +L ++ LE+  ELG T+  + EIL+LT GS+IELDR +G P+DV+ NG ++A+GEVVVIDD +GIRITEI+ +
Sbjct:   25 PFIFQDLPDEPQKRETDDS------VNLDLLMDISLELVVELGRTKKKINEILELTQGSIIELDRVSGEPVDVLINGKIVAKGEVVVIDDYFGIRITEILNK 120          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig98011.22572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A358FY61_9ACTN2.430e-3060.64Flagellar motor switch protein FliN n=1 Tax=Acidim... [more]
A0A4Q7NW53_9ACTN4.400e-2565.82Flagellar motor switch protein FliN/FliY n=1 Tax=M... [more]
A0A094ITD5_9GAMM8.560e-2549.02Flagellar motor switch protein FliN n=1 Tax=Pseudi... [more]
A0A346XUG4_9ACTN1.840e-2460.23Flagellar motor switch protein FliN n=1 Tax=Euzeby... [more]
UPI00196B79E32.000e-2460.23flagellar motor switch protein FliN n=1 Tax=Euzeby... [more]
U5WE98_9ACTN3.280e-2452.83Flagellar motor switch protein FliN n=6 Tax=Microm... [more]
A0A0D8HFH8_9ACTN1.350e-2348.54Flagellar motor switch protein FliN n=1 Tax=Acidit... [more]
A0A525C0N6_9GAMM1.580e-2342.73Flagellar motor switch protein FliN n=1 Tax=Gammap... [more]
A0A420XTQ3_9ACTN1.840e-2361.25Flagellar motor switch protein FliN/FliY n=1 Tax=M... [more]
UPI001BC9287F2.660e-2347.06flagellar motor switch protein FliN n=1 Tax=Bacill... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001172Flagellar motor switch FliN/Type III secretion HrcQbPRINTSPR00956FLGMOTORFLINcoord: 62..78
score: 31.62
coord: 79..95
score: 43.75
coord: 108..123
score: 55.08
coord: 95..108
score: 44.64
IPR036429SpoA-like superfamilyGENE3D2.30.330.10coord: 55..136
e-value: 2.0E-29
score: 103.0
IPR036429SpoA-like superfamilySUPERFAMILY101801Surface presentation of antigens (SPOA)coord: 61..134
IPR012826Flagellar motor switch FliNTIGRFAMTIGR02480TIGR02480coord: 61..132
e-value: 2.5E-28
score: 95.8
IPR001543Surface presentation of antigen (SpoA)PFAMPF01052FliMN_Ccoord: 63..132
e-value: 1.9E-25
score: 88.7
NoneNo IPR availablePANTHERPTHR43484:SF1FLAGELLAR MOTOR SWITCH PROTEIN FLINcoord: 58..133
NoneNo IPR availablePANTHERPTHR43484FAMILY NOT NAMEDcoord: 58..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig98011contigM-pyrifera_M_contig98011:73..492 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig98011.22572.1mRNA_M-pyrifera_M_contig98011.22572.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig98011 73..492 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig98011.22572.1 ID=prot_M-pyrifera_M_contig98011.22572.1|Name=mRNA_M-pyrifera_M_contig98011.22572.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
VGQGAPGAASGSVLLVAGPNGPLLVGLVTASAPSLDEDLPFQMERRMDND
AAMGDGLLSLGVLREVPLEVSAELGHTRLSVAEILQLTIGSVIELDRTAG
APIDVVANGSLIARGEVVVIDDEYGIRITEIVGRVGDAI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001172FliN_T3SS_HrcQb
IPR036429SpoA-like_sf
IPR012826FliN
IPR001543SpoA