prot_M-pyrifera_M_contig97580.22477.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97580.22477.1
Unique Nameprot_M-pyrifera_M_contig97580.22477.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: A0A7Y2IQ80_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IQ80_9ACTN)

HSP 1 Score: 60.5 bits (145), Expect = 1.220e-9
Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSAAGYTSR 51
            DS +V  + ++G  VFLVPF+G+P +W D+G+W +L  L  +    GYTSR
Sbjct:  156 DSGIVAPESVNGIGVFLVPFIGLPRIWFDNGEWLRLGALVTLFVVVGYTSR 206          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: UPI000F9A981F (signal peptidase I n=1 Tax=Curtobacterium sp. PhB130 TaxID=2485178 RepID=UPI000F9A981F)

HSP 1 Score: 52.4 bits (124), Expect = 1.550e-6
Identity = 22/48 (45.83%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSAAGY 48
            DST +ER  + G A   +PFVG P +W+ DG+W K+ +LA  L+A  Y
Sbjct:  128 DSTPIERSAVHGVAFLRIPFVGTPIVWLRDGEWHKVVLLALALTAMLY 175          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: UPI00188A9BB5 (signal peptidase I n=1 Tax=Curtobacterium sp. VKM Ac-1393 TaxID=2783814 RepID=UPI00188A9BB5)

HSP 1 Score: 52.4 bits (124), Expect = 1.690e-6
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSA 45
            DST +ER D+ G A   +PFVG P LW+  G+W K+ VLA  L+A
Sbjct:  125 DSTPLERSDVHGVAFLRIPFVGAPVLWLRQGEWAKVLVLALGLTA 169          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: A0A2W1Z8E7_9MICO (Signal peptidase I n=7 Tax=Curtobacterium TaxID=2034 RepID=A0A2W1Z8E7_9MICO)

HSP 1 Score: 52.0 bits (123), Expect = 2.320e-6
Identity = 20/50 (40.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSAAGYTS 50
            DST + R  + G     VP++GMP +W+ DG+W K+A+L   L+A  + S
Sbjct:  131 DSTPITRSAVHGVGFIRVPYIGMPVMWLRDGEWKKVAILVLALTAMAFLS 180          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: A0A3N1JAH3_9MICO (Signal peptidase n=2 Tax=unclassified Curtobacterium TaxID=257496 RepID=A0A3N1JAH3_9MICO)

HSP 1 Score: 51.2 bits (121), Expect = 4.320e-6
Identity = 21/48 (43.75%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSAAGY 48
            DST +ER  + G A   +P+VG P +W+ DG+W K+ +LA  L+A  Y
Sbjct:  128 DSTPIERSAVHGVAFLRIPYVGTPIVWLRDGEWHKVVLLALALTAMLY 175          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: UPI001C4E9A05 (Ig-like domain-containing protein n=2 Tax=unclassified Arthrobacter TaxID=235627 RepID=UPI001C4E9A05)

HSP 1 Score: 51.2 bits (121), Expect = 4.370e-6
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDW-----WKLAVLAAVLSAA-GYTSRR 52
            DST + R+ ISG A  L+P+VG+P LW+  GD+     W L  L AV +A  G T+RR
Sbjct:   69 DSTPITREQISGQARLLIPWVGLPGLWLASGDFPSLALWSLLTLTAVAAAVLGVTNRR 126          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: UPI00188AE1A5 (S26 family signal peptidase n=1 Tax=Curtobacterium sp. VKM Ac-1395 TaxID=2783815 RepID=UPI00188AE1A5)

HSP 1 Score: 50.4 bits (119), Expect = 8.110e-6
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSA 45
            DST + R D+ G A   +P VG P +W+ DG W KLA+LA  ++A
Sbjct:  125 DSTAISRSDVHGVAFLRIPVVGTPIVWMRDGAWSKLALLALAVAA 169          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: A0A2W1U2U8_9MICO (Ig-like domain-containing protein n=21 Tax=Curtobacterium TaxID=2034 RepID=A0A2W1U2U8_9MICO)

HSP 1 Score: 49.7 bits (117), Expect = 1.520e-5
Identity = 22/45 (48.89%), Postives = 29/45 (64.44%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSA 45
            DST +ER  + G A   +PFVG P LW+  G+W K+ VLA  L+A
Sbjct:  125 DSTPLERSAVRGVAFLRIPFVGSPVLWLRQGEWVKVVVLALGLTA 169          
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Match: A0A2S3ZR14_ARTGL (Signal peptidase I n=3 Tax=Arthrobacter glacialis TaxID=1664 RepID=A0A2S3ZR14_ARTGL)

HSP 1 Score: 47.8 bits (112), Expect = 7.360e-5
Identity = 23/50 (46.00%), Postives = 32/50 (64.00%), Query Frame = 0
Query:    1 DSTLVERDDISGTAVFLVPFVGMPPLWVDDGD-----WWKLAVLAAVLSA 45
            DST ++R+ I+G A  LVPFVG+P LW+  G+     WW +  L AV+ A
Sbjct:  133 DSTPLKREQITGQARLLVPFVGLPGLWLGLGNLPALAWWSVLTLIAVVLA 182          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97580.22477.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A7Y2IQ80_9ACTN1.220e-945.10Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
UPI000F9A981F1.550e-645.83signal peptidase I n=1 Tax=Curtobacterium sp. PhB1... [more]
UPI00188A9BB51.690e-651.11signal peptidase I n=1 Tax=Curtobacterium sp. VKM ... [more]
A0A2W1Z8E7_9MICO2.320e-640.00Signal peptidase I n=7 Tax=Curtobacterium TaxID=20... [more]
A0A3N1JAH3_9MICO4.320e-643.75Signal peptidase n=2 Tax=unclassified Curtobacteri... [more]
UPI001C4E9A054.370e-646.55Ig-like domain-containing protein n=2 Tax=unclassi... [more]
UPI00188AE1A58.110e-646.67S26 family signal peptidase n=1 Tax=Curtobacterium... [more]
A0A2W1U2U8_9MICO1.520e-548.89Ig-like domain-containing protein n=21 Tax=Curtoba... [more]
A0A2S3ZR14_ARTGL7.360e-546.00Signal peptidase I n=3 Tax=Arthrobacter glacialis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97580contigM-pyrifera_M_contig97580:1..156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97580.22477.1mRNA_M-pyrifera_M_contig97580.22477.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97580 1..156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97580.22477.1 ID=prot_M-pyrifera_M_contig97580.22477.1|Name=mRNA_M-pyrifera_M_contig97580.22477.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
DSTLVERDDISGTAVFLVPFVGMPPLWVDDGDWWKLAVLAAVLSAAGYTS
RR
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