prot_M-pyrifera_M_contig97413.22437.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig97413.22437.1
Unique Nameprot_M-pyrifera_M_contig97413.22437.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length177
Homology
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A6U2CDB0_HEMAN (DNA damage-binding protein 1 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2CDB0_HEMAN)

HSP 1 Score: 195 bits (495), Expect = 1.920e-54
Identity = 101/175 (57.71%), Postives = 127/175 (72.57%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L DK+K+SLGTQP+TL  F S G+ ++FA SDRPTV+YSNNKKLLFSNVNL DV  +S FN+E F DSLAI +   LTIGTIDDIQKLHIR++PLGE PRRI H ES+ AF + T+K      G + +   ++LLD+ +FE L +FELRR E  C++    F  D + Y+VVGTA
Sbjct:  620 LSDKKKVSLGTQPLTLSRFQSKGSTHVFAASDRPTVIYSNNKKLLFSNVNLKDVTQMSQFNSEDFTDSLAIATESGLTIGTIDDIQKLHIRSVPLGEQPRRICHQESARAFCICTIKVTFDEAGEDVDEHYVKLLDDQTFEVLHTFELRRWENCCSLTTCTFIDDASTYIVVGTA 794          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A176VZA6_MARPO (DNA damage-binding protein 1 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VZA6_MARPO)

HSP 1 Score: 191 bits (485), Expect = 4.650e-53
Identity = 96/175 (54.86%), Postives = 126/175 (72.00%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPITLR F S    ++FA SDRPTV+YS+N+KLL+SNVNL +V ++  FN+ +FPDSLAI   G LTIGTIDDIQKLHIRT+PLGE PRRI H ESS  F L + K   ++NG + E+  +RL+D+ +FE + +++L   E GC++    FA D   Y  VGTA
Sbjct:  565 LSDRKKISLGTQPITLRTFRSKNATHVFAASDRPTVIYSSNRKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDDIQKLHIRTVPLGEQPRRICHQESSRTFGLCSAKHQNSSNGEDMESHYVRLIDDQTFEIIATYQLDTYETGCSIITCSFADDSNVYFCVGTA 739          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A2C9VPU0_MANES (Uncharacterized protein n=7 Tax=fabids TaxID=91835 RepID=A0A2C9VPU0_MANES)

HSP 1 Score: 190 bits (482), Expect = 1.100e-52
Identity = 100/175 (57.14%), Postives = 128/175 (73.14%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPITLR FSS    ++FA SDRPTV+YS+NKKLL+SNVNL +V ++  FN+ AFPDSLAI   G LTIGTIDDIQKLHIRTIPLGE  RRI H E S  FA+ ++K+ ++A   E ET  +RLLD+ SFE + +++L   E GC++ +  F+ D   Y  VGTA
Sbjct:  617 LSDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQSRTFAICSLKNQSSAE--ESETHFIRLLDDQSFEFISTYQLDPFEYGCSMLSCSFSDDINVYYCVGTA 789          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A067GJ31_CITSI (Uncharacterized protein n=2 Tax=rosids TaxID=71275 RepID=A0A067GJ31_CITSI)

HSP 1 Score: 187 bits (475), Expect = 2.870e-52
Identity = 98/175 (56.00%), Postives = 126/175 (72.00%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPITLR FSS    ++FA SDRPTV+YS+NKKLL+SNVNL +V ++  FN+ AFPDSLAI   G LTIGTIDDIQKLHIR+IPLGE PRRI H E S  FA+ ++K+ + A   E E   +RLLD+ +FE + ++ L   E GC++ +  F+ D   Y  VGTA
Sbjct:  303 LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICHQEQSRTFAICSLKNQSCAE--ESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDSNVYYCVGTA 475          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A6A6MEY8_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MEY8_HEVBR)

HSP 1 Score: 188 bits (478), Expect = 3.090e-52
Identity = 100/175 (57.14%), Postives = 128/175 (73.14%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPITLR FSS    ++FA SDRPTV+YS+NKKLL+SNVNL +V ++  FN+ AFPDSLAI   G LTIGTIDDIQKLHIRTIPLGE  RRI H E S  FA+ ++K+ ++A   E ET  +RLLD+ SFE + +++L   E GC++ +  F+ D   Y  VGTA
Sbjct:  494 LTDRKKVSLGTQPITLRTFSSKNVTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQSRTFAICSLKNQSSAE--ETETHFIRLLDDQSFEFISTYQLDPFEYGCSILSCSFSDDINVYYCVGTA 666          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A1Y1HSK5_KLENI (DNA damage-binding protein 1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSK5_KLENI)

HSP 1 Score: 188 bits (477), Expect = 5.210e-52
Identity = 97/175 (55.43%), Postives = 129/175 (73.71%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPI+L+ F S    ++FA SDRPTV+YS+N+KLL+SNVNL +V ++  FN+ +FPDSLAI     LTIGTIDDIQKLHIRTIPLGE  RRIAH E S  F ++TVK  +  +G E E++ +RL+D+ +FE + S+ L + EQGCA+ +  F+ DP  Y  VGTA
Sbjct:  617 LTDRKKISLGTQPISLKTFKSKSATHVFAASDRPTVIYSSNQKLLYSNVNLKEVNHMCPFNSASFPDSLAIGMESELTIGTIDDIQKLHIRTIPLGEHARRIAHQEPSRTFGIITVKYNSINSGDEPESNFVRLVDDQTFEVVGSYALDKDEQGCAIISCSFSEDPATYYCVGTA 791          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A061SBD9_9CHLO (DNA damage-binding protein 1 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SBD9_9CHLO)

HSP 1 Score: 187 bits (475), Expect = 9.790e-52
Identity = 94/175 (53.71%), Postives = 130/175 (74.29%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L +++K+SLGT+P+TLR FSSNG  ++FA SDRPTV+Y +NKKLL+SNVN  +V ++++FN  +FP+SLAI S   +TIGTID+IQKLHIRT+PL EMPRRIAH ESS  F ++TV+  ++ +G  E+   +RL+D  +FE + SF L   E GC++ +  F  D + Y VVGTA
Sbjct:  621 LMNRKKISLGTKPVTLRTFSSNGTTHVFAASDRPTVIYYSNKKLLYSNVNENEVNFMTSFNCASFPNSLAIASKSSMTIGTIDEIQKLHIRTVPLNEMPRRIAHQESSRTFGVITVQLASSHSGDVEQNCHVRLVDEQTFEVVSSFSLDEHELGCSILSCSFEEDDSIYYVVGTA 795          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A7I4AY44_PHYPA (DNA damage-binding protein 1 n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4AY44_PHYPA)

HSP 1 Score: 187 bits (475), Expect = 9.880e-52
Identity = 95/175 (54.29%), Postives = 122/175 (69.71%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPI LR F S    ++FA SDRPTV+YS+NKKLL+SNVNL +V ++  FN+ +FPDSLAI   G LTIGTID+IQKLHIRT+PLGE PRRIAH E S  FA+ + K    +NG + ET  +RL+++ +FE +  F L   E GC++    F  D   Y  VGTA
Sbjct:  640 LSDRKKISLGTQPIALRTFRSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVNHMCPFNSASFPDSLAIGKEGELTIGTIDEIQKLHIRTVPLGEHPRRIAHQEQSRTFAICSAKYAPGSNGEDMETHYVRLIEDQTFEIISGFPLDPYENGCSIITCSFTDDSNVYYCVGTA 814          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: UPI001FB0A394 (DNA damage-binding protein 1 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB0A394)

HSP 1 Score: 186 bits (473), Expect = 1.810e-51
Identity = 97/175 (55.43%), Postives = 126/175 (72.00%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPITLR FSS    ++FA SDRPTV+YS+NKKLL+SNVNL +V ++  FN+ AFPDSLAI   G LTIGTIDDIQKLHIRTIPLGE  RRI H E +  FA+ ++K    +N  E E   +RLLD+ +FE + ++ L + E GC++ +  F+ DP  Y  +GTA
Sbjct:  617 LTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKLLYSNVNLKEVSHMCPFNSAAFPDSLAIAREGELTIGTIDDIQKLHIRTIPLGEHARRICHQEHTRTFAICSLK-YNQSNSEETEMHFIRLLDDQTFEFISTYPLDQYEYGCSIISCSFSDDPNVYYCIGTA 790          
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Match: A0A7J8LXN4_9ROSI (CPSF_A domain-containing protein n=1 Tax=Gossypium lobatum TaxID=34289 RepID=A0A7J8LXN4_9ROSI)

HSP 1 Score: 182 bits (462), Expect = 2.040e-51
Identity = 97/175 (55.43%), Postives = 125/175 (71.43%), Query Frame = 0
Query:    3 LGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSNVNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEMPRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFELRRLEQGCAVEAVRFAADPTEYLVVGTA 177
            L D++K+SLGTQPITLR FSS    ++FA SDRPTV+YS+NKKLL+SNVNL +V ++  FN+ AFPDSLAI   G LTIGTIDDIQKLHIRTIPLGE  RRI H E S  FA+  +K+ ++A+  E E   +RLLD+ + E + ++ L   E GC++ +  F+ D   Y  VGTA
Sbjct:  108 LTDRKKVSLGTQPITLRTFSSKNTTHVFASSDRPTVIYSSNKKLLYSNVNLKEVGHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHARRICHQEQSRTFAICCLKNQSSAD--ESEMHFIRLLDDQTLECISTYPLDTFEYGCSILSCSFSDDTNVYYCVGTA 280          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig97413.22437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U2CDB0_HEMAN1.920e-5457.71DNA damage-binding protein 1 n=1 Tax=Hemiselmis an... [more]
A0A176VZA6_MARPO4.650e-5354.86DNA damage-binding protein 1 n=2 Tax=Marchantia po... [more]
A0A2C9VPU0_MANES1.100e-5257.14Uncharacterized protein n=7 Tax=fabids TaxID=91835... [more]
A0A067GJ31_CITSI2.870e-5256.00Uncharacterized protein n=2 Tax=rosids TaxID=71275... [more]
A0A6A6MEY8_HEVBR3.090e-5257.14Uncharacterized protein n=1 Tax=Hevea brasiliensis... [more]
A0A1Y1HSK5_KLENI5.210e-5255.43DNA damage-binding protein 1 n=1 Tax=Klebsormidium... [more]
A0A061SBD9_9CHLO9.790e-5253.71DNA damage-binding protein 1 n=2 Tax=Tetraselmis s... [more]
A0A7I4AY44_PHYPA9.880e-5254.29DNA damage-binding protein 1 n=6 Tax=Physcomitrium... [more]
UPI001FB0A3941.810e-5155.43DNA damage-binding protein 1 n=1 Tax=Impatiens gla... [more]
A0A7J8LXN4_9ROSI2.040e-5155.43CPSF_A domain-containing protein n=1 Tax=Gossypium... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 40..177
e-value: 4.4E-35
score: 123.5
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 3..177
IPR031297DNA damage-binding protein 1PANTHERPTHR10644:SF3DNA DAMAGE-BINDING PROTEIN 1coord: 3..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig97413contigM-pyrifera_M_contig97413:62..592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig97413.22437.1mRNA_M-pyrifera_M_contig97413.22437.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig97413 62..592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig97413.22437.1 ID=prot_M-pyrifera_M_contig97413.22437.1|Name=mRNA_M-pyrifera_M_contig97413.22437.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MGLGDKRKLSLGTQPITLRGFSSNGNRNLFAVSDRPTVVYSNNKKLLFSN
VNLPDVEYVSAFNTEAFPDSLAIYSGGCLTIGTIDDIQKLHIRTIPLGEM
PRRIAHHESSSAFALLTVKSLTAANGLEEETSSLRLLDNVSFERLDSFEL
RRLEQGCAVEAVRFAADPTEYLVVGTA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR031297DDB1