prot_M-pyrifera_M_contig96191.22170.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig96191.22170.1
Unique Nameprot_M-pyrifera_M_contig96191.22170.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length140
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig96191.22170.1 vs. uniprot
Match: A0A2K1KX00_PHYPA (Anaphase-promoting complex subunit 5 n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KX00_PHYPA)

HSP 1 Score: 58.9 bits (141), Expect = 2.160e-7
Identity = 41/123 (33.33%), Postives = 61/123 (49.59%), Query Frame = 0 
Query:    9 IEELRRMAPKVSAVHYLALVFEIQRRNVSNARDELHRYFDHQVYEHATRKRDRGANSNGKEGARRSSLL---PFALLNLASLHFLFSDYDEGVQAVSEAVRLAQASSDQGVLAVGLTWLHRLL 128
            + +L ++AP +  VHYL  +  +Q+ +     D+LHRYFD+            G       GA   S +      LL+L S+H  F   D+ +QA++EAVR+AQ  +D   LA  L  L  LL
Sbjct:  287 LTQLEKLAPDMMKVHYLRYLNHLQQSDYPATMDDLHRYFDYSA----------GMGGMSVGGASCDSSVGRFQAGLLSLGSMHAHFGHVDQAMQALNEAVRIAQQYNDDACLAHALAALCHLL 399
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig96191.22170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2K1KX00_PHYPA2.160e-733.33Anaphase-promoting complex subunit 5 n=2 Tax=Physc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026000Anaphase-promoting complex subunit 5 domainPFAMPF12862ANAPC5coord: 23..130
e-value: 5.0E-22
score: 77.8
IPR037679Anaphase-promoting complex subunit 5PANTHERPTHR12830FAMILY NOT NAMEDcoord: 4..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig96191contigM-pyrifera_M_contig96191:6..425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig96191.22170.1mRNA_M-pyrifera_M_contig96191.22170.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig96191 6..425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig96191.22170.1 ID=prot_M-pyrifera_M_contig96191.22170.1|Name=mRNA_M-pyrifera_M_contig96191.22170.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp
TEREISRRIEELRRMAPKVSAVHYLALVFEIQRRNVSNARDELHRYFDHQ
VYEHATRKRDRGANSNGKEGARRSSLLPFALLNLASLHFLFSDYDEGVQA
VSEAVRLAQASSDQGVLAVGLTWLHRLLQQQMGTSRGESS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026000Apc5_dom
IPR037679Apc5