prot_M-pyrifera_M_contig95933.22115.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95933.22115.1
Unique Nameprot_M-pyrifera_M_contig95933.22115.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
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BLAST of mRNA_M-pyrifera_M_contig95933.22115.1 vs. uniprot
Match: A0A2E7KMS8_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KMS8_9PLAN)

HSP 1 Score: 245 bits (626), Expect = 1.370e-81
Identity = 134/145 (92.41%), Postives = 138/145 (95.17%), Query Frame = 0 
Query:    1 MNLSPATEKQYITNISRLSRFTGGYCLFFGTVLFVVSLVMHPTILIGAVLHLITGLLYFLLSKGIQQRSERSIAALTLFSVVLTAASFTAILYLVLEDWNIPALIGLTIFLIINLQLFIELILWKRFRRRLSSKQESQSQESPPN 145
            MNLS ATEKQYI NIS LS FTGGYCLFFGTVLF VSLV+HPTILIGAVLHLITGLLYFLL+KGIQQRSERSI+ALTLFSV LTAASFTAILYLVLEDWNIPALIGLTIFLIINLQLFIELILWKR RRRLSSKQESQSQ+SPPN
Sbjct:    1 MNLSSATEKQYIKNISILSCFTGGYCLFFGTVLFAVSLVIHPTILIGAVLHLITGLLYFLLAKGIQQRSERSISALTLFSVGLTAASFTAILYLVLEDWNIPALIGLTIFLIINLQLFIELILWKRLRRRLSSKQESQSQDSPPN 145
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BLAST of mRNA_M-pyrifera_M_contig95933.22115.1 vs. uniprot
Match: A0A517WB23_9PLAN (Uncharacterized protein n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WB23_9PLAN)

HSP 1 Score: 238 bits (606), Expect = 1.540e-78
Identity = 128/142 (90.14%), Postives = 134/142 (94.37%), Query Frame = 0 
Query:    1 MNLSPATEKQYITNISRLSRFTGGYCLFFGTVLFVVSLVMHPTILIGAVLHLITGLLYFLLSKGIQQRSERSIAALTLFSVVLTAASFTAILYLVLEDWNIPALIGLTIFLIINLQLFIELILWKRFRRRLSSKQESQSQES 142
            MNLS ATEKQYITNISRLS FTGGYCLFFG VLF VSLVMHPTILIGAVLHLITGLLYFLL+KGIQQRSERSI+ALT FSV LTA SFTAILY+VL+DWNIPALIGLTIFLIINLQLFIELILWKR RRRLSS+Q+SQSQES
Sbjct:    1 MNLSSATEKQYITNISRLSLFTGGYCLFFGIVLFAVSLVMHPTILIGAVLHLITGLLYFLLAKGIQQRSERSISALTFFSVALTAVSFTAILYMVLDDWNIPALIGLTIFLIINLQLFIELILWKRLRRRLSSRQDSQSQES 142
[Close]
BLAST of mRNA_M-pyrifera_M_contig95933.22115.1 vs. uniprot
Match: A0A517V728_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V728_9PLAN)

HSP 1 Score: 180 bits (457), Expect = 8.070e-56
Identity = 97/147 (65.99%), Postives = 119/147 (80.95%), Query Frame = 0 
Query:    1 MNLSPATEKQYITNISRLSRFTGGYCLFFGTVLFVVSLVMHPTILIGAVLHLITGLLYFLLSKGIQQRSERSIAALTLFSVVLTAASFTAILYLVL--EDWNIPALIGLTIFLIINLQLFIELILWKRFRRRLSSKQESQSQESPPN 145
            M L+PATEK+++ NIS+L+RFTGGYCLFFG VLF+VSLV++P IL GAVLHLITGLL+ L + GI+QRS+RSI  LTLF+  L AAS  AIL+LVL   +WNIPALIGLTIF++INLQL +EL LWKR R+RLS+  ES+ Q    N
Sbjct:    1 MPLTPATEKKFVENISKLTRFTGGYCLFFGAVLFLVSLVLNPVILFGAVLHLITGLLFLLFANGIKQRSQRSILGLTLFAATLAAASSIAILFLVLIEANWNIPALIGLTIFMVINLQLLVELFLWKRLRKRLSATPESEPQAFTSN 147
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95933.22115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2E7KMS8_9PLAN1.370e-8192.41Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A517WB23_9PLAN1.540e-7890.14Uncharacterized protein n=1 Tax=Gimesia chilikensi... [more]
A0A517V728_9PLAN8.070e-5665.99Uncharacterized protein n=1 Tax=Gimesia algae TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..145
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..43
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..100
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 44..61
NoneNo IPR availableTMHMMTMhelixcoord: 101..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95933contigM-pyrifera_M_contig95933:169..606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95933.22115.1mRNA_M-pyrifera_M_contig95933.22115.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95933 169..606 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95933.22115.1 ID=prot_M-pyrifera_M_contig95933.22115.1|Name=mRNA_M-pyrifera_M_contig95933.22115.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
MNLSPATEKQYITNISRLSRFTGGYCLFFGTVLFVVSLVMHPTILIGAVL
HLITGLLYFLLSKGIQQRSERSIAALTLFSVVLTAASFTAILYLVLEDWN
IPALIGLTIFLIINLQLFIELILWKRFRRRLSSKQESQSQESPPN*
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