prot_M-pyrifera_M_contig95761.22081.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95761.22081.1
Unique Nameprot_M-pyrifera_M_contig95761.22081.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length182
Homology
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A2P6TP50_CHLSO (ERAD-associated E3 ubiquitin-ligase HRD1B-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP50_CHLSO)

HSP 1 Score: 115 bits (289), Expect = 1.170e-26
Identity = 62/177 (35.03%), Postives = 98/177 (55.37%), Query Frame = 0
Query:    5 EHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCREAVAPDLP 181
                 V+LLFAFE  V A +++L  +++ L  +D  +EG+W  KG  + +  L L++L L ++ A+FAVVF  Y  PL ++RDL   F    + V +    +++ A + +      ++DL    DH+C ICR ++T  G    L C H++H+HC+  W E  Q CP CR +V P  P
Sbjct:  172 NRPVGVDLLFAFEYTVQASTIVLTFIKYCLSMVDIAMEGRWEGKGVAVFYLELTLDMLHLLVYCAFFAVVFSTYGIPLHLVRDLYWTFRNFNQRVRDFLRYRRITANMDQSFPDATEEDLQRA-DHVCIICREELTTQGRNKKLGCNHVFHLHCLRSWLERQQNCPICRRSVVPPTP 347          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 8.460e-25
Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 0
Query:    7 GASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCREAVAPDLP 181
            G SV +LF FE  +LA+S+    LR+ LH +D RIEG W  KG+YL F      V+R   +V +F+++F +Y  PL ++RDL  ++  + R ++     + L A +  R      ++L   + H C ICR  +     A  LPC HI+H+ C+  W +  Q+CP CR  +  + P
Sbjct:  166 GPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELIGCE-HTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNSP 339          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: UPI001ED8BCD7 (E3 ubiquitin-protein ligase synoviolin B n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BCD7)

HSP 1 Score: 100 bits (249), Expect = 2.500e-21
Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 0
Query:    4 LEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDL---VNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            +  GASV+L+F FE  +L   ++ IT++++LH IDQ  E  W NK  +LL+  L++  +++ L++ + A++   Y+ PL   R +   + AF     +VI  R A Q    L   A     ++L    D++C ICR ++        LPC HI+H  C+  WF+  QTCP CR
Sbjct:  166 MSKGASVQLVFGFEYAILLTIMINITIKYILHTIDQTSENPWENKAVFLLYTELVMGFIKVVLYLTFVAIMIRLYTLPLFAFRPMYYTMRAFKKAFNDVILSRRAIQNMNSLYPDATP---EEL-AAADNVCIICREEMVTASKK--LPCNHIFHTSCLRSWFQRQQTCPTCR 332          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A0L0DFU9_THETB (E3 ubiquitin-protein ligase synoviolin-A n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DFU9_THETB)

HSP 1 Score: 99.4 bits (246), Expect = 6.430e-21
Identity = 60/171 (35.09%), Postives = 93/171 (54.39%), Query Frame = 0
Query:    4 LEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQR-IEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            L+ G S+ LLF FE  +L + ++ +   + LH  D   +EGQW NKG Y+L   +L    R   ++ +F VV ++YS P+ ML +L +++ A    V+     +++   L  R   +   DLD  +D MC++CRVDV    +   LPC H++H  C+  W E  Q CP CR
Sbjct:  163 LDKGPSLVLLFVFEYLILLVLVVEMLATYGLHLWDLHGVEGQWQNKGWYMLVLEVLGVGARFFAYITFFCVVLHYYSLPIHMLPELFSSWRAFQNKVVEFVNYRRVIGDLAERFEAVTAADLDG-EDAMCTVCRVDV---DEGHRLPCGHVFHYDCLRSWMERRQQCPTCR 329          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: UPI001CF180ED (E3 ubiquitin-protein ligase synoviolin-like isoform X1 n=5 Tax=Acropora TaxID=6127 RepID=UPI001CF180ED)

HSP 1 Score: 95.9 bits (237), Expect = 1.010e-19
Identity = 52/172 (30.23%), Postives = 93/172 (54.07%), Query Frame = 0
Query:    2 TLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            T+++ GASV+L+F FE  +L   ++ I +++VLH ID R E  W NK  YLL+  L+   ++  L+  +  ++   ++ PL  +R +        +++ ++  +++  A +         ++L    D++C ICR ++T       LPC HI+H  C+  WF+  QTCP CR
Sbjct:  161 TVMQSGASVQLVFGFEYAILLTIVVTIQMKYVLHIIDLRSENPWDNKAVYLLYTELITGFIKTILYSCFMVIMIKVHTFPLFAIRPMYLTLRGFKKSISDVIMSRRAIANMNTLYPDATPEELQQ-GDNVCIICREEMTTG--CKKLPCNHIFHTSCLRSWFQRQQTCPTCR 329          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A2I4CSW0_9TELE (RING-type E3 ubiquitin transferase n=2 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4CSW0_9TELE)

HSP 1 Score: 95.5 bits (236), Expect = 1.370e-19
Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 0
Query:    2 TLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVD-VTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            +++  GASV+L+F FE  +L   +L   ++++LH +D + E  W NK  Y+L+  L    +++ L++A+  ++   ++ PL  +R +  A     + V +   +++    +         +DL    D++C ICR + VTG   A  LPC HI+H  C+  WF+  QTCP CR
Sbjct:  162 SIINRGASVQLVFGFEYAILLTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDL-QASDNVCIICREEMVTG---AKKLPCNHIFHSSCLRSWFQRQQTCPTCR 330          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: UPI001069E8D2 (E3 ubiquitin-protein ligase synoviolin-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069E8D2)

HSP 1 Score: 94.7 bits (234), Expect = 2.480e-19
Identity = 48/172 (27.91%), Postives = 97/172 (56.40%), Query Frame = 0
Query:    2 TLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            ++L  GAS +L+F FE  +L   ++ + +++VLH ID +    W NK  Y+L+  L++  ++  L+V++  ++   ++ PL  +R +     +  +++ ++  +++    +        +++L    D++C ICR ++T +  A  LPC HI+H+ C+  WF+  QTCP CR
Sbjct:  161 SVLNSGASTQLVFGFEYAILLTIVVAVFMKYVLHTIDLQSVNPWENKAVYILYSELVMGFIKSSLYVSFMFIMIRVHTFPLFAIRPMYLTLRSFKKSISDVIMSRRAILNMNTLYPDATEEELAS-GDNVCIICREEMTTN--AKKLPCNHIFHISCLRSWFQRQQTCPTCR 329          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 2.930e-16
Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 0
Query:   13 LFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLL-MLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            LFAFE  +L+++     +  +LH +D R+EG W  K T+++       V +   +V +F V+F  Y  P L ++RD+  +F+ + R +      +QL   +  R     +++L   + H C ICR D    G    LPC HI+H  C+  W +  Q CP CR
Sbjct:  172 LFAFEYAILSIAAFSTAVHLLLHVVDNRMEGAWHAKATWVMLLEFFSEVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFDRLQRRLQAFYRYRQLANTMDERFPDATEEELAECE-HTCIICR-DTMDAGKK--LPCGHIFHFQCLRMWLQQQQACPTCR 329          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A0W4ZVS2_PNEJ7 (RING-type domain-containing protein n=1 Tax=Pneumocystis jirovecii (strain RU7) TaxID=1408657 RepID=A0A0W4ZVS2_PNEJ7)

HSP 1 Score: 81.6 bits (200), Expect = 8.660e-15
Identity = 47/190 (24.74%), Postives = 87/190 (45.79%), Query Frame = 0
Query:    2 TLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDA---------------VMLPCRHIYHVHCILPWFENSQTCPFCREAV 176
            T+L    ++ L+FAFE  +L  +++   +++  + ID      W NKG Y+L+  L L + +L  +  +F +    Y  PL ++RD+     + +    +L   +++   + +R      +++   +D  C ICR ++    +                  LPC HI H +C+  W E  Q+CP CR  V
Sbjct:  119 TILNQKPNMMLMFAFEFAILTSTIIGAAIKYTFNLIDSYHNDNWENKGLYVLYLELFLELFKLIAYTTFFMLALTFYGLPLHIIRDVYITLKSFLAKCRDLIRYKRVTNNMNQRFVDATLEEITATEDKTCIICREEMVHSSEKDPNENNKSQHINNTPKKLPCNHILHFNCLKSWLERQQSCPTCRRPV 308          
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A1E7FD03_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD03_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.430e-13
Identity = 46/173 (26.59%), Postives = 89/173 (51.45%), Query Frame = 0
Query:    1 MTLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 173
            M ++ +G SV + FAFE  ++  S++   L + LH +D        +K T +    L     +   ++ +FA+V  +Y  P+ ++R++  +F+++   +I     ++L + + R       +DL+  ++H+C ICR ++T +    +  C HI+H  C+  W    QTCP CR
Sbjct:  172 MNIMTNGPSVSIFFAFESLIMLTSVISNNLLWYLHMMDD-------HKATLIFAVELQAQAAKFMFYLTFFAIVMTYYGLPINLIREVYVSFHSLKTRLIAFNKYRKLMSSMNRFKDPTT-EDLE--EEHICIICRDEMTVETSKKLPGCGHIFHKSCLRDWLVQQQTCPTCR 334          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6TP50_CHLSO1.170e-2635.03ERAD-associated E3 ubiquitin-ligase HRD1B-like n=1... [more]
A0A4D9CLU7_9STRA8.460e-2534.86RING-type domain-containing protein n=2 Tax=Monodo... [more]
UPI001ED8BCD72.500e-2134.10E3 ubiquitin-protein ligase synoviolin B n=1 Tax=I... [more]
A0A0L0DFU9_THETB6.430e-2135.09E3 ubiquitin-protein ligase synoviolin-A n=1 Tax=T... [more]
UPI001CF180ED1.010e-1930.23E3 ubiquitin-protein ligase synoviolin-like isofor... [more]
A0A2I4CSW0_9TELE1.370e-1930.64RING-type E3 ubiquitin transferase n=2 Tax=Austrof... [more]
UPI001069E8D22.480e-1927.91E3 ubiquitin-protein ligase synoviolin-like n=1 Ta... [more]
D8LTS9_ECTSI2.930e-1631.48RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0W4ZVS2_PNEJ78.660e-1524.74RING-type domain-containing protein n=1 Tax=Pneumo... [more]
A0A1E7FD03_9STRA1.430e-1326.59RING-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 132..172
e-value: 7.4E-6
score: 35.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 131..173
e-value: 3.7E-12
score: 46.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 132..173
score: 12.165
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 93..179
e-value: 7.4E-17
score: 62.8
NoneNo IPR availablePANTHERPTHR22763:SF169coord: 8..178
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 8..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..76
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..182
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 118..179
NoneNo IPR availableTMHMMTMhelixcoord: 56..78
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95761contigM-pyrifera_M_contig95761:3..548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95761.22081.1mRNA_M-pyrifera_M_contig95761.22081.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95761 3..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95761.22081.1 ID=prot_M-pyrifera_M_contig95761.22081.1|Name=mRNA_M-pyrifera_M_contig95761.22081.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MTLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGT
YLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVI
NLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPC
RHIYHVHCILPWFENSQTCPFCREAVAPDLPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD