mRNA_M-pyrifera_M_contig95761.22081.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A2P6TP50_CHLSO (ERAD-associated E3 ubiquitin-ligase HRD1B-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TP50_CHLSO) HSP 1 Score: 115 bits (289), Expect = 1.170e-26 Identity = 62/177 (35.03%), Postives = 98/177 (55.37%), Query Frame = 1
Query: 13 EHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCREAVAPDLP 543
V+LLFAFE V A +++L +++ L +D +EG+W KG + + L L++L L ++ A+FAVVF Y PL ++RDL F + V + +++ A + + ++DL DH+C ICR ++T G L C H++H+HC+ W E Q CP CR +V P P
Sbjct: 172 NRPVGVDLLFAFEYTVQASTIVLTFIKYCLSMVDIAMEGRWEGKGVAVFYLELTLDMLHLLVYCAFFAVVFSTYGIPLHLVRDLYWTFRNFNQRVRDFLRYRRITANMDQSFPDATEEDLQRA-DHVCIICREELTTQGRNKKLGCNHVFHLHCLRSWLERQQNCPICRRSVVPPTP 347
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A4D9CLU7_9STRA (RING-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLU7_9STRA) HSP 1 Score: 110 bits (275), Expect = 8.460e-25 Identity = 61/175 (34.86%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 19 GASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCREAVAPDLP 543
G SV +LF FE +LA+S+ LR+ LH +D RIEG W KG+YL F V+R +V +F+++F +Y PL ++RDL ++ + R ++ + L A + R ++L + H C ICR + A LPC HI+H+ C+ W + Q+CP CR + + P
Sbjct: 166 GPSVLILFGFEYTILAVSVSSTLLRYCLHLVDMRIEGNWPQKGSYLFFLEFATEVVRFLSYVVFFSIIFTYYGMPLHIVRDLWMSYVNLKRRLVIFNKYRHLTANMNERFPDATSEELIGCE-HTCIICRDLMEAGPGAKKLPCSHIFHLDCLRLWLQQQQSCPTCRADIPTNSP 339
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: UPI001ED8BCD7 (E3 ubiquitin-protein ligase synoviolin B n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED8BCD7) HSP 1 Score: 100 bits (249), Expect = 2.500e-21 Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 10 LEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDL---VNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 519
+ GASV+L+F FE +L ++ IT++++LH IDQ E W NK +LL+ L++ +++ L++ + A++ Y+ PL R + + AF +VI R A Q L A ++L D++C ICR ++ LPC HI+H C+ WF+ QTCP CR
Sbjct: 166 MSKGASVQLVFGFEYAILLTIMINITIKYILHTIDQTSENPWENKAVFLLYTELVMGFIKVVLYLTFVAIMIRLYTLPLFAFRPMYYTMRAFKKAFNDVILSRRAIQNMNSLYPDATP---EEL-AAADNVCIICREEMVTASKK--LPCNHIFHTSCLRSWFQRQQTCPTCR 332
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A0L0DFU9_THETB (E3 ubiquitin-protein ligase synoviolin-A n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DFU9_THETB) HSP 1 Score: 99.4 bits (246), Expect = 6.430e-21 Identity = 60/171 (35.09%), Postives = 93/171 (54.39%), Query Frame = 1
Query: 10 LEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQR-IEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 519
L+ G S+ LLF FE +L + ++ + + LH D +EGQW NKG Y+L +L R ++ +F VV ++YS P+ ML +L +++ A V+ +++ L R + DLD +D MC++CRVDV + LPC H++H C+ W E Q CP CR
Sbjct: 163 LDKGPSLVLLFVFEYLILLVLVVEMLATYGLHLWDLHGVEGQWQNKGWYMLVLEVLGVGARFFAYITFFCVVLHYYSLPIHMLPELFSSWRAFQNKVVEFVNYRRVIGDLAERFEAVTAADLDG-EDAMCTVCRVDV---DEGHRLPCGHVFHYDCLRSWMERRQQCPTCR 329
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: UPI001CF180ED (E3 ubiquitin-protein ligase synoviolin-like isoform X1 n=5 Tax=Acropora TaxID=6127 RepID=UPI001CF180ED) HSP 1 Score: 95.9 bits (237), Expect = 1.010e-19 Identity = 52/172 (30.23%), Postives = 93/172 (54.07%), Query Frame = 1
Query: 4 TLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 519
T+++ GASV+L+F FE +L ++ I +++VLH ID R E W NK YLL+ L+ ++ L+ + ++ ++ PL +R + +++ ++ +++ A + ++L D++C ICR ++T LPC HI+H C+ WF+ QTCP CR
Sbjct: 161 TVMQSGASVQLVFGFEYAILLTIVVTIQMKYVLHIIDLRSENPWDNKAVYLLYTELITGFIKTILYSCFMVIMIKVHTFPLFAIRPMYLTLRGFKKSISDVIMSRRAIANMNTLYPDATPEELQQ-GDNVCIICREEMTTG--CKKLPCNHIFHTSCLRSWFQRQQTCPTCR 329
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: D8LTS9_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTS9_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 2.930e-16 Identity = 51/162 (31.48%), Postives = 82/162 (50.62%), Query Frame = 1
Query: 37 LFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLL-MLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 519
LFAFE +L+++ + +LH +D R+EG W K T+++ V + +V +F V+F Y P L ++RD+ +F+ + R + +QL + R +++L + H C ICR D G LPC HI+H C+ W + Q CP CR
Sbjct: 172 LFAFEYAILSIAAFSTAVHLLLHVVDNRMEGAWHAKATWVMLLEFFSEVFKFSFYVIFFGVMFSLYGVPPLNLIRDVYMSFDRLQRRLQAFYRYRQLANTMDERFPDATEEELAECE-HTCIICR-DTMDAGKK--LPCGHIFHFQCLRMWLQQQQACPTCR 329
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A0W4ZVS2_PNEJ7 (RING-type domain-containing protein n=1 Tax=Pneumocystis jirovecii (strain RU7) TaxID=1408657 RepID=A0A0W4ZVS2_PNEJ7) HSP 1 Score: 81.6 bits (200), Expect = 8.660e-15 Identity = 47/190 (24.74%), Postives = 87/190 (45.79%), Query Frame = 1
Query: 4 TLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDA---------------VMLPCRHIYHVHCILPWFENSQTCPFCREAV 528
T+L ++ L+FAFE +L +++ +++ + ID W NKG Y+L+ L L + +L + +F + Y PL ++RD+ + + +L +++ + +R +++ +D C ICR ++ + LPC HI H +C+ W E Q+CP CR V
Sbjct: 119 TILNQKPNMMLMFAFEFAILTSTIIGAAIKYTFNLIDSYHNDNWENKGLYVLYLELFLELFKLIAYTTFFMLALTFYGLPLHIIRDVYITLKSFLAKCRDLIRYKRVTNNMNQRFVDATLEEITATEDKTCIICREEMVHSSEKDPNENNKSQHINNTPKKLPCNHILHFNCLKSWLERQQSCPTCRRPV 308
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A1E7FD03_9STRA (RING-type domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD03_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.430e-13 Identity = 46/173 (26.59%), Postives = 89/173 (51.45%), Query Frame = 1
Query: 1 MTLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCR 519
M ++ +G SV + FAFE ++ S++ L + LH +D +K T + L + ++ +FA+V +Y P+ ++R++ +F+++ +I ++L + + R +DL+ ++H+C ICR ++T + + C HI+H C+ W QTCP CR
Sbjct: 172 MNIMTNGPSVSIFFAFESLIMLTSVISNNLLWYLHMMDD-------HKATLIFAVELQAQAAKFMFYLTFFAIVMTYYGLPINLIREVYVSFHSLKTRLIAFNKYRKLMSSMNRFKDPTT-EDLE--EEHICIICRDEMTVETSKKLPGCGHIFHKSCLRDWLVQQQTCPTCR 334
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: A0A098VXU6_9MICR (Synovial apoptosis inhibitor 1 n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VXU6_9MICR) HSP 1 Score: 75.1 bits (183), Expect = 1.230e-12 Identity = 51/183 (27.87%), Postives = 87/183 (47.54%), Query Frame = 1
Query: 16 HGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQ-WLNK-----------GTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDLVNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVTGDGDAVMLPCRHIYHVHCILPWFENSQTCPFCREAV 528
+G S+ L+FAFE G+L +SL+ ++ + D + + W +K GT+ + S++ + RL L+ +F V Y P+ ++RD ++ + +LR Q ++ R + DL D +C ICR D+ A L C H++H C+ W E Q+CP CR +
Sbjct: 120 YGPSMMLIFAFEAGILTVSLISSAAKYGFNIYDSSLAPEEWESKSIAMVYLDIISGTFTMLSSII-DFFRLLLYGTFFGAVTGLYGLPIHIIRDFYLTVKSLATRIQDLRRFLQATQNMEERYMDATEQDLG-ASDRLCIICREDMQS---AKKLDCGHMFHFKCLKSWLERQQSCPTCRSPI 297
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Match: UPI00200812B2 (RING-type E3 ubiquitin transferase n=1 Tax=Purpureocillium takamizusanense TaxID=2060973 RepID=UPI00200812B2) HSP 1 Score: 72.8 bits (177), Expect = 1.110e-11 Identity = 52/164 (31.71%), Postives = 83/164 (50.61%), Query Frame = 1
Query: 106 QIDQRIEGQWLNKGTYLLFGSLLLNVLRLGLHVAYFAVVFYHYSAPLLMLRDL-------VNAFNAVMRNVINLRAAQQLRAKLQRRAWTIQQDDLDHIQDHMCSICRVDVT--------GDGDAVM---LPCRHIYHVHCILPWFENSQTCPFCREAVAPDLP 543
++D + G W KG ++L+ LL ++++LG++VA+FA++ Y P+ ++RDL V NA++R RA Q++ R +DL Q++ C ICR ++ G D + LPC HI H+ C+ W E Q CP CR V + P
Sbjct: 257 EMDIEVPG-WAAKGEWVLWLDLLTDMIKLGIYVAFFAMLLTFYGLPIHIMRDLFMTSRDFVKRLNALLRYR---RAIQEMN-----RYHDATAEDL--AQENTCIICREEMRPWDPANNPGAIDRIRPKKLPCGHILHLGCLKSWLERQQVCPTCRSPVTAERP 409 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95761.22081.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95761.22081.1 >prot_M-pyrifera_M_contig95761.22081.1 ID=prot_M-pyrifera_M_contig95761.22081.1|Name=mRNA_M-pyrifera_M_contig95761.22081.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp MTLLEHGASVELLFAFECGVLALSLLLITLRFVLHQIDQRIEGQWLNKGTback to top mRNA from alignment at M-pyrifera_M_contig95761:3..548+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95761.22081.1 ID=mRNA_M-pyrifera_M_contig95761.22081.1|Name=mRNA_M-pyrifera_M_contig95761.22081.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig95761:3..548+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95761:3..548+ >mRNA_M-pyrifera_M_contig95761.22081.1 ID=mRNA_M-pyrifera_M_contig95761.22081.1|Name=mRNA_M-pyrifera_M_contig95761.22081.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1092bp|location=Sequence derived from alignment at M-pyrifera_M_contig95761:3..548+ (Macrocystis pyrifera P11B4 male)back to top |