prot_M-pyrifera_M_contig95705.22068.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95705.22068.1
Unique Nameprot_M-pyrifera_M_contig95705.22068.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A7S2B1L5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1L5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.660e-33
Identity = 59/94 (62.77%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEEE 94
            M + APPPWLINMQRYGPPP+YPSL+I GLNAP+P GA+FG+ PG WG+PPVD+ GRP+YGDVFG+   +E + A+A   V    WGEL +E E
Sbjct:   15 MPDNAPPPWLINMQRYGPPPSYPSLKIAGLNAPLPEGASFGYHPGGWGKPPVDEYGRPIYGDVFGQ---AEASAATAAPEVDHTLWGELGSESE 105          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A4V3WRC6_CAMSI (PSP domain-containing protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4V3WRC6_CAMSI)

HSP 1 Score: 127 bits (319), Expect = 6.520e-33
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEE 93
            M EGAPPPWLINMQRYGPPP+YP L+IPGLNAPIP GA+FG+ PG WG+PPVD+ GRP+YGDVFG + + E+     E     +HWG+L  EE
Sbjct:   46 MPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDEFGRPLYGDVFGVQ-QQEQPNYEEEPVDKTKHWGDLEEEE 137          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A5J9UVJ9_9POAL (PSP domain-containing protein n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A5J9UVJ9_9POAL)

HSP 1 Score: 131 bits (329), Expect = 8.370e-33
Identity = 61/94 (64.89%), Postives = 76/94 (80.85%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEEE 94
            M +GAPPPWLINMQRYGPPP+YPSL+IPGLNAPIP GA+FG++PG+WG+PPVD+ GRP+YGDVFG + + +E     E     +HWG+L  EEE
Sbjct:  298 MPDGAPPPWLINMQRYGPPPSYPSLKIPGLNAPIPPGASFGYRPGEWGKPPVDEYGRPLYGDVFGVQ-QQDEPNYDDEPVDRSKHWGDLEEEEE 390          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A662X840_9STRA (PSP domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X840_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.050e-32
Identity = 61/92 (66.30%), Postives = 74/92 (80.43%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAE 92
            M EG PPPWL+NMQRYGPPPAYP+L+IPGLNAPIP GA+FG+ PG WG+PPVD+ G+P+YGDVFGK  ESE+     + G+ +E WGEL  E
Sbjct:  352 MVEGVPPPWLLNMQRYGPPPAYPNLKIPGLNAPIPEGASFGYHPGGWGKPPVDENGQPLYGDVFGKPTESEQTVR--DEGINRERWGELEEE 441          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A0A0LMT1_CUCSA (PSP domain-containing protein n=12 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LMT1_CUCSA)

HSP 1 Score: 130 bits (328), Expect = 1.300e-32
Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEEE 94
            M EGAPPPWLINMQRYGPPP+YP L+IPGLNAPIP GA+FG+ PG WG+PPVD+ GRP+YGDVFG + + E+A    E     +HWG+L  EEE
Sbjct:  321 MPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQ-QQEQANYEEEPVDKTKHWGDLEEEEE 413          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: F0Y119_AURAN (PSP domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y119_AURAN)

HSP 1 Score: 121 bits (303), Expect = 1.320e-32
Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEG 68
            M +GAPPPWLINMQRYGPPP+YP+LRIPGLNAPIP GA+FG+ PG WG+PPVD+ GRP+YGDVFG  G
Sbjct:   56 MPDGAPPPWLINMQRYGPPPSYPNLRIPGLNAPIPEGASFGYHPGGWGKPPVDEYGRPLYGDVFGARG 123          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A812UK03_SYMMI (SF3B2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UK03_SYMMI)

HSP 1 Score: 127 bits (320), Expect = 1.460e-32
Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAA 91
            M E APPPWLINMQRYGPPP+YPSLRIPGLNAPIP GA++G+ PG WG+PPVD+ GRP+YGDVFG   + + A   +   + + HWGEL A
Sbjct:  103 MLENAPPPWLINMQRYGPPPSYPSLRIPGLNAPIPEGASYGYHPGGWGKPPVDEYGRPLYGDVFGTYAQEDHAVLES---IDRSHWGELGA 190          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A804PWD8_MAIZE (PSP domain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A804PWD8_MAIZE)

HSP 1 Score: 127 bits (318), Expect = 1.820e-32
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEEE 94
            M +GAPPPWLINMQRYGPPP+YP L+IPGLNAPIP GA+FG++PG+WG+PPVD+ GRP+YGDVFG   + +E     E     +HWG+L  EEE
Sbjct:   85 MPDGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYRPGEWGKPPVDEHGRPLYGDVFGVL-QQDEPSYDDEPVDRSKHWGDLEEEEE 177          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A059CEB3_EUCGR (PSP domain-containing protein n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CEB3_EUCGR)

HSP 1 Score: 127 bits (319), Expect = 2.200e-32
Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEE 93
            M EGAPPPWLINMQRYGPPP+YP L+IPGLNAPIP GA+FG+ PG WG+PPVD+ GRP+YGDVFG + + E+     E     +HWG+L  EE
Sbjct:  112 MPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGVQ-QQEQPNYEEEPLDKTKHWGDLEEEE 203          
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Match: A0A2U1M9S6_ARTAN (PSP domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1M9S6_ARTAN)

HSP 1 Score: 129 bits (325), Expect = 3.750e-32
Identity = 65/95 (68.42%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    1 MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQPPVDQLGRPVYGDVFGKEGESEEAKASAEAGVLK-EHWGELAAEEE 94
            M EGAPPPWLIN+QRYGPPP+YP LRIPGLNAPIP GA+FG+ PG WG+PPVD+ GRPVYGDVFG++   EE     E  V K +HWG+L  EEE
Sbjct:  335 MPEGAPPPWLINIQRYGPPPSYPHLRIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPVYGDVFGQQ---EELPNYEEEPVDKSKHWGDLEEEEE 426          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95705.22068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2B1L5_9STRA1.660e-3362.77Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A4V3WRC6_CAMSI6.520e-3364.52PSP domain-containing protein n=1 Tax=Camellia sin... [more]
A0A5J9UVJ9_9POAL8.370e-3364.89PSP domain-containing protein n=2 Tax=PACMAD clade... [more]
A0A662X840_9STRA1.050e-3266.30PSP domain-containing protein n=2 Tax=Nothophytoph... [more]
A0A0A0LMT1_CUCSA1.300e-3265.96PSP domain-containing protein n=12 Tax=Cucurbitace... [more]
F0Y119_AURAN1.320e-3277.94PSP domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A812UK03_SYMMI1.460e-3264.84SF3B2 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A804PWD8_MAIZE1.820e-3263.83PSP domain-containing protein n=2 Tax=Zea mays Tax... [more]
A0A059CEB3_EUCGR2.200e-3264.52PSP domain-containing protein n=1 Tax=Eucalyptus g... [more]
A0A2U1M9S6_ARTAN3.750e-3268.42PSP domain-containing protein n=1 Tax=Artemisia an... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availablePANTHERPTHR12785:SF6SPLICING FACTOR 3B SUBUNIT 2coord: 1..155
NoneNo IPR availablePANTHERPTHR12785splicing factor 3Bcoord: 1..155
IPR006568PSP, proline-richSMARTSM00581testneucoord: 1..36
e-value: 2.9E-6
score: 36.8
IPR006568PSP, proline-richPFAMPF04046PSPcoord: 1..32
e-value: 1.4E-12
score: 47.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95705contigM-pyrifera_M_contig95705:35..642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95705.22068.1mRNA_M-pyrifera_M_contig95705.22068.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95705 35..657 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95705.22068.1 ID=prot_M-pyrifera_M_contig95705.22068.1|Name=mRNA_M-pyrifera_M_contig95705.22068.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
MAEGAPPPWLINMQRYGPPPAYPSLRIPGLNAPIPAGAAFGFQPGQWGQP
PVDQLGRPVYGDVFGKEGESEEAKASAEAGVLKEHWGELAAEEEGDDEEE
DEEDGEEAEEEAEEGGHVAGLAAAGAGAATPYSLSGATSVATGVATPDAI
NMRKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006568PSP_pro-rich