prot_M-pyrifera_M_contig95642.22055.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95642.22055.1
Unique Nameprot_M-pyrifera_M_contig95642.22055.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length208
Homology
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: F0YP59_AURAN (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP59_AURAN)

HSP 1 Score: 152 bits (383), Expect = 1.470e-42
Identity = 108/211 (51.18%), Postives = 127/211 (60.19%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTS-REQYIHRLGRTARAGKAGGGLLLVAPEEA-----RALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAAGIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAKGARGG 205
            R SQ+ R + +  FRDA GG  LF+SDVSARGMDYP VT VVQFG  +   QY+HRLGRTARAGK G G LL++  EA     +A+       +RP     + AGD  G  L     D+ L G A A    T G A+ AWLGFYNS+LRRL+WDK  LVA AN  WA          G+A+PP L  KTVGKMGL+G  GL   AKG  GG
Sbjct:    6 RKSQSHRTKVADAFRDATGGCCLFTSDVSARGMDYPDVTRVVQFGAPADAAQYVHRLGRTARAGKEGSGCLLLSDFEAYFLEDKAIKALPIAMQRP-----LVAGDATGAVL--GRVDAALMGAARALPPETCGAAYQAWLGFYNSSLRRLRWDKDDLVAEAND-WAKE------ILGMAEPPQLQAKTVGKMGLKGVRGL-NVAKGPSGG 201          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S2LSU6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LSU6_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.050e-38
Identity = 95/207 (45.89%), Postives = 125/207 (60.39%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAG-GGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAAG-----------IRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGL 195
            R +Q AR RAS++FR +   A +F+SDV+ARGMDYP VT V+Q GLT R QYIHRLGRTARAGK G GGLLL   EEA  +       K+          +LKG+PL P+  + ++   A              +RV+   A+ AWLG+YN +L++++WDK  LV  AN LWA  +       GL+  P L ++TVGKMGL+G PGL
Sbjct:   40 RKAQKARERASEEFRKSKN-AVMFTSDVTARGMDYPDVTFVLQVGLTDRAQYIHRLGRTARAGKEGKGGLLLSNYEEAHMV-------KK----------ELKGMPLEPTPINVSVKTSAVVEQAKQNVGKDKTLRVSAEQAYRAWLGYYNGHLKKVRWDKKLLVQQAN-LWAQQN-------GLSDQPALQKRTVGKMGLKGVPGL 220          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S1C442_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C442_9STRA)

HSP 1 Score: 142 bits (357), Expect = 4.540e-36
Identity = 96/209 (45.93%), Postives = 119/209 (56.94%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARAL-------LGPTWPPKRPTEVGEVKAGD------LKGLPLVPSTADSTLTGGAA-AGIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGL 195
            R SQAAR +AS+QF D  G   +F+SDVSARGMDYPG+T V+Q GLT +EQY+HRLGRTARAGK G GLL++AP E   L       L    P  + T    V  G       L  LP      D+   G A  A +      A+ +WLGFYNS+LR  +W + TLV   NA +A          G + PP L ++TVGKMGL+G  GL
Sbjct:  335 RKSQAARVKASRQFLDGSG-VTMFTSDVSARGMDYPGLTLVLQVGLTEKEQYVHRLGRTARAGKGGCGLLIMAPHERHMLRTLADMPLTEAGPASKITGGVSVVGGPRDNLSTLTDLPAFQRVLDNIERGHAREAPLSARAAQAYGSWLGFYNSHLRACRWTQETLVQETNAFFATL--------GCSTPPALMKRTVGKMGLKGVRGL 534          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S2S2Y5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2Y5_9STRA)

HSP 1 Score: 135 bits (339), Expect = 7.480e-36
Identity = 97/211 (45.97%), Postives = 120/211 (56.87%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVP---------STADSTLTGGAAAGIRVTHGV------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLI 196
            R SQ  R +AS+ F     G  LF+SDVSARGMDYP VT V+Q GLT++EQYIHRLGRTARAGK+G G LLVA  E R +                   +L+G+PLVP         S++   L    A+     H +      ++ AWLGFYNSNLR+L W+K  LV  AN L+A G        G   PP L ++TVGKMGLR  PGL+
Sbjct:   51 RKSQPQRDKASRAFASCHQGV-LFTSDVSARGMDYPNVTFVLQVGLTTKEQYIHRLGRTARAGKSGTGALLVAEFEERPM-----------------QNELRGVPLVPAPLPAPNPASSSLPQLQALLASMANPRHPLHQSAAQSYQAWLGFYNSNLRKLGWNKPHLVQMAN-LYARGI-------GHPTPPPLLKRTVGKMGLRDVPGLV 235          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A2P6VP19_9CHLO (DEAD-box ATP-dependent RNA helicase 25-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VP19_9CHLO)

HSP 1 Score: 142 bits (357), Expect = 1.180e-35
Identity = 101/208 (48.56%), Postives = 128/208 (61.54%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGL-TSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAA----GIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGL-IEEAKGA 202
            R SQ+AR +ASK+FR+A   + LFSSDVSARG+DYP VT V+Q G+ +SREQYIHRLGRTARAG+AG GL+++ PEE   L              +++   L   P VP +   T    AA     G R+   +A+ AWLGFYNS  + + WDK TLV  AN   A          GL+QPP L +KT+G MGLRG PGL I+E+ GA
Sbjct:  363 RKSQSAREKASKEFREARA-SILFSSDVSARGVDYPDVTMVLQVGIPSSREQYIHRLGRTARAGRAGRGLIMLMPEEQHFLR-------------QLRDLPLTAEPGVPVSQQETAAIQAALPRLMGDRLPD-MAYAAWLGFYNST-KGMGWDKPTLVEQANRFAA--------VMGLSQPPALMKKTIGMMGLRGVPGLRIDESGGA 546          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S4AEW1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AEW1_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.480e-35
Identity = 98/209 (46.89%), Postives = 122/209 (58.37%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAA-----GIRVTHGV------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEE 198
            R SQ  R RAS +FR     A +FSSDV+ARGMDYPGVT V+Q GLT R QYIHRLGRTARAGK G G LL+A  E   +               VK  +L  +PL  ++  S  T  +AA      +  TH +      A+ AWLG+YN +L+++KWDK TLV  AN   A+         GL   P+L ++T+GKMGLRGTPGLI E
Sbjct:  409 RKSQKQRERASDEFRKRKN-AVMFSSDVTARGMDYPGVTFVLQVGLTDRSQYIHRLGRTARAGKDGKGGLLLAEYERDYM---------------VKK-ELADMPLESTSIPSLDTASSAATRAIQNVSKTHDLRTAAEQAYRAWLGYYNGHLKKVKWDKKTLVQQANMWGAEV--------GLKAQPSLQKRTIGKMGLRGTPGLIIE 592          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S3DXD7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DXD7_9STRA)

HSP 1 Score: 140 bits (353), Expect = 3.780e-35
Identity = 94/202 (46.53%), Postives = 122/202 (60.40%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVP---STADSTLTGGAAAG-IRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEE 198
            R SQ+AR +AS QFR +   A LF+SDV+ARGMDY  VTAV+Q G T R+QYIHRLGRTARAGK+G G++L+AP E   ++          E+ ++   +    PL P   +  D  L   +    +R +   A+ AWLG+YN NLR+  WDK TLV  AN  WA          GL + P L +KTVGKMGL+G PGL+ E
Sbjct:  450 RKSQSARQKASDQFRKSRN-AILFTSDVTARGMDYDNVTAVLQVGFTERDQYIHRLGRTARAGKSGHGVVLMAPYEKNHMM--------KKELQDLPMQESACPPLSPELQAAMDGALRNVSQNNSLRESAEQAYRAWLGYYNGNLRKAGWDKKTLVQEANQ-WAKDI-------GLKEQPKLLKKTVGKMGLKGVPGLLLE 634          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A5A8E470_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E470_CAFRO)

HSP 1 Score: 137 bits (346), Expect = 2.860e-34
Identity = 103/244 (42.21%), Postives = 129/244 (52.87%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLG-----PTWPPKRPTEVGEVKAGDLKGLPLVPST--------ADSTLTGGAAAGIRVTHGV--------------------------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAKGARGG 205
            R SQA R RA+  F+ A   A LFSSDVSARGMD+P VT V+Q GLT REQYIHRLGRTARAGKAG G L++ P+EA  + G     P   P  P       +    GL L P+         AD++  G  A  I    G+                          A+ +W+G+Y    R++ W  A +VA AN  W  G+  +    GL + P L R+TVGKMGLRG PG+ EEAKG+ GG
Sbjct:  291 RKSQAQRMRAADTFKSAPK-AILFSSDVSARGMDFPDVTMVMQVGLTDREQYIHRLGRTARAGKAGRGCLVLLPDEAAHMAGMLRGLPIRSPLDPASTAIPGSIADAGLHLAPARGGPWPMAHADASGPGAGAEHIAAAIGMVGGGTGAGPVRASASDRDSMASLAAMAYSSWIGYYKGAARKVGWSPAQMVAVAND-WFAGAGGL----GLREVPILQRRTVGKMGLRGVPGIREEAKGSGGG 528          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A9TI18_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TI18_PHYPA)

HSP 1 Score: 134 bits (338), Expect = 1.190e-33
Identity = 98/203 (48.28%), Postives = 115/203 (56.65%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGL-TSREQYIHRLGRTARAGKAGGGLLLVAPEEA---RALLGPTWPPKRPTEVG-EVKAGDLKGLPLVPSTADSTLTGGAAAGIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFG---GLAQPPTLPRKTVGKMGLRGTPGL 195
            R SQ+ R +AS +FR+  GG  +F+SDVSARG+DYP VT VVQ G   SREQYIHRLGRT RAGK G GLLL+ P E    R+L   T    + TEV  +++A   K L  +     S                A+ AWLG+YNS  R LKWDK TLV  AN           LF    GL QPP L +KTVG MGLR  PGL
Sbjct:  302 RKSQSFRTKASNEFRNHPGGVIMFTSDVSARGVDYPDVTFVVQVGTPASREQYIHRLGRTGRAGKEGRGLLLLTPWEEVFLRSLNDITITQSKGTEVSPDIEAKVNKALGYIDEDTKSK---------------AYQAWLGYYNS-CRLLKWDKQTLVKRAN-----------LFSSTLGLRQPPALLKKTVGMMGLRNVPGL 477          
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A5A8D4G7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4G7_CAFRO)

HSP 1 Score: 135 bits (341), Expect = 1.400e-33
Identity = 101/241 (41.91%), Postives = 127/241 (52.70%), Query Frame = 0
Query:    1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLG-----PTWPPKRPTEVGEVKAGDLKGLPLVPST--------ADSTLTGGAAAGIRVTHGV--------------------------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAKGA 202
            R SQA R RA+  F+ A   A LFSSDVSARGMD+P VT V+Q GLT REQYIHRLGRTARAGKAG G L++ P+EA  + G     P   P  P       +    GL L P+         AD++  G  A  I    G+                          A+ +W+G+Y    R++ W  A +VA AN  W  G+  +    GL + P L R+TVGKMGLRG PG+ EEAKG+
Sbjct:  291 RKSQAQRMRAADTFKSAPK-AILFSSDVSARGMDFPDVTMVMQVGLTDREQYIHRLGRTARAGKAGRGCLVLLPDEAAHMAGMLRGLPIRSPLDPASTAIPGSIADAGLHLAPARGGPWPMAHADASGPGAGAEHIAAAIGMVGGGTGAGPVRASASDRDSMASLAAMAYSSWIGYYKGAARKVGWSPAQMVAVAND-WFAGAGGL----GLREVPILQRRTVGKMGLRGVPGIREEAKGS 525          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YP59_AURAN1.470e-4251.18Helicase C-terminal domain-containing protein (Fra... [more]
A0A7S2LSU6_9STRA2.050e-3845.89Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1C442_9STRA4.540e-3645.93Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2S2Y5_9STRA7.480e-3645.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2P6VP19_9CHLO1.180e-3548.56DEAD-box ATP-dependent RNA helicase 25-like n=1 Ta... [more]
A0A7S4AEW1_9STRA1.480e-3546.89Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3DXD7_9STRA3.780e-3546.53Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A5A8E470_CAFRO2.860e-3442.21Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A9TI18_PHYPA1.190e-3348.28Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A5A8D4G7_CAFRO1.400e-3341.91Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1..63
e-value: 7.6E-4
score: 28.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 3..63
e-value: 9.8E-11
score: 42.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..112
score: 9.493
NoneNo IPR availableGENE3D3.40.50.300coord: 1..97
e-value: 4.8E-20
score: 74.1
NoneNo IPR availablePANTHERPTHR24031:SF384DEAD-BOX ATP-DEPENDENT RNA HELICASE 31coord: 1..184
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 1..184
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95642contigM-pyrifera_M_contig95642:3..728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95642.22055.1mRNA_M-pyrifera_M_contig95642.22055.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95642 3..728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95642.22055.1 ID=prot_M-pyrifera_M_contig95642.22055.1|Name=mRNA_M-pyrifera_M_contig95642.22055.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSRE
QYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGD
LKGLPLVPSTADSTLTGGAAAGIRVTHGVAFVAWLGFYNSNLRRLKWDKA
TLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAK
GARGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase