mRNA_M-pyrifera_M_contig95642.22055.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: F0YP59_AURAN (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YP59_AURAN) HSP 1 Score: 152 bits (383), Expect = 1.470e-42 Identity = 108/211 (51.18%), Postives = 127/211 (60.19%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTS-REQYIHRLGRTARAGKAGGGLLLVAPEEA-----RALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAAGIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAKGARGG 615 R SQ+ R + + FRDA GG LF+SDVSARGMDYP VT VVQFG + QY+HRLGRTARAGK G G LL++ EA +A+ +RP + AGD G L D+ L G A A T G A+ AWLGFYNS+LRRL+WDK LVA AN WA G+A+PP L KTVGKMGL+G GL AKG GG Sbjct: 6 RKSQSHRTKVADAFRDATGGCCLFTSDVSARGMDYPDVTRVVQFGAPADAAQYVHRLGRTARAGKEGSGCLLLSDFEAYFLEDKAIKALPIAMQRP-----LVAGDATGAVL--GRVDAALMGAARALPPETCGAAYQAWLGFYNSSLRRLRWDKDDLVAEAND-WAKE------ILGMAEPPQLQAKTVGKMGLKGVRGL-NVAKGPSGG 201
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S2LSU6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LSU6_9STRA) HSP 1 Score: 141 bits (355), Expect = 2.050e-38 Identity = 95/207 (45.89%), Postives = 125/207 (60.39%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAG-GGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAAG-----------IRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGL 585 R +Q AR RAS++FR + A +F+SDV+ARGMDYP VT V+Q GLT R QYIHRLGRTARAGK G GGLLL EEA + K+ +LKG+PL P+ + ++ A +RV+ A+ AWLG+YN +L++++WDK LV AN LWA + GL+ P L ++TVGKMGL+G PGL Sbjct: 40 RKAQKARERASEEFRKSKN-AVMFTSDVTARGMDYPDVTFVLQVGLTDRAQYIHRLGRTARAGKEGKGGLLLSNYEEAHMV-------KK----------ELKGMPLEPTPINVSVKTSAVVEQAKQNVGKDKTLRVSAEQAYRAWLGYYNGHLKKVRWDKKLLVQQAN-LWAQQN-------GLSDQPALQKRTVGKMGLKGVPGL 220
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S1C442_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C442_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.540e-36 Identity = 96/209 (45.93%), Postives = 119/209 (56.94%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARAL-------LGPTWPPKRPTEVGEVKAGD------LKGLPLVPSTADSTLTGGAA-AGIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGL 585 R SQAAR +AS+QF D G +F+SDVSARGMDYPG+T V+Q GLT +EQY+HRLGRTARAGK G GLL++AP E L L P + T V G L LP D+ G A A + A+ +WLGFYNS+LR +W + TLV NA +A G + PP L ++TVGKMGL+G GL Sbjct: 335 RKSQAARVKASRQFLDGSG-VTMFTSDVSARGMDYPGLTLVLQVGLTEKEQYVHRLGRTARAGKGGCGLLIMAPHERHMLRTLADMPLTEAGPASKITGGVSVVGGPRDNLSTLTDLPAFQRVLDNIERGHAREAPLSARAAQAYGSWLGFYNSHLRACRWTQETLVQETNAFFATL--------GCSTPPALMKRTVGKMGLKGVRGL 534
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S2S2Y5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2Y5_9STRA) HSP 1 Score: 135 bits (339), Expect = 7.480e-36 Identity = 97/211 (45.97%), Postives = 120/211 (56.87%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVP---------STADSTLTGGAAAGIRVTHGV------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLI 588 R SQ R +AS+ F G LF+SDVSARGMDYP VT V+Q GLT++EQYIHRLGRTARAGK+G G LLVA E R + +L+G+PLVP S++ L A+ H + ++ AWLGFYNSNLR+L W+K LV AN L+A G G PP L ++TVGKMGLR PGL+ Sbjct: 51 RKSQPQRDKASRAFASCHQGV-LFTSDVSARGMDYPNVTFVLQVGLTTKEQYIHRLGRTARAGKSGTGALLVAEFEERPM-----------------QNELRGVPLVPAPLPAPNPASSSLPQLQALLASMANPRHPLHQSAAQSYQAWLGFYNSNLRKLGWNKPHLVQMAN-LYARGI-------GHPTPPPLLKRTVGKMGLRDVPGLV 235
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A2P6VP19_9CHLO (DEAD-box ATP-dependent RNA helicase 25-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VP19_9CHLO) HSP 1 Score: 142 bits (357), Expect = 1.180e-35 Identity = 101/208 (48.56%), Postives = 128/208 (61.54%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGL-TSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAA----GIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGL-IEEAKGA 606 R SQ+AR +ASK+FR+A + LFSSDVSARG+DYP VT V+Q G+ +SREQYIHRLGRTARAG+AG GL+++ PEE L +++ L P VP + T AA G R+ +A+ AWLGFYNS + + WDK TLV AN A GL+QPP L +KT+G MGLRG PGL I+E+ GA Sbjct: 363 RKSQSAREKASKEFREARA-SILFSSDVSARGVDYPDVTMVLQVGIPSSREQYIHRLGRTARAGRAGRGLIMLMPEEQHFLR-------------QLRDLPLTAEPGVPVSQQETAAIQAALPRLMGDRLPD-MAYAAWLGFYNST-KGMGWDKPTLVEQANRFAA--------VMGLSQPPALMKKTIGMMGLRGVPGLRIDESGGA 546
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S4AEW1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AEW1_9STRA) HSP 1 Score: 141 bits (355), Expect = 1.480e-35 Identity = 98/209 (46.89%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVPSTADSTLTGGAAA-----GIRVTHGV------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEE 594 R SQ R RAS +FR A +FSSDV+ARGMDYPGVT V+Q GLT R QYIHRLGRTARAGK G G LL+A E + VK +L +PL ++ S T +AA + TH + A+ AWLG+YN +L+++KWDK TLV AN A+ GL P+L ++T+GKMGLRGTPGLI E Sbjct: 409 RKSQKQRERASDEFRKRKN-AVMFSSDVTARGMDYPGVTFVLQVGLTDRSQYIHRLGRTARAGKDGKGGLLLAEYERDYM---------------VKK-ELADMPLESTSIPSLDTASSAATRAIQNVSKTHDLRTAAEQAYRAWLGYYNGHLKKVKWDKKTLVQQANMWGAEV--------GLKAQPSLQKRTIGKMGLRGTPGLIIE 592
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A7S3DXD7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DXD7_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.780e-35 Identity = 94/202 (46.53%), Postives = 122/202 (60.40%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLGPTWPPKRPTEVGEVKAGDLKGLPLVP---STADSTLTGGAAAG-IRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEE 594 R SQ+AR +AS QFR + A LF+SDV+ARGMDY VTAV+Q G T R+QYIHRLGRTARAGK+G G++L+AP E ++ E+ ++ + PL P + D L + +R + A+ AWLG+YN NLR+ WDK TLV AN WA GL + P L +KTVGKMGL+G PGL+ E Sbjct: 450 RKSQSARQKASDQFRKSRN-AILFTSDVTARGMDYDNVTAVLQVGFTERDQYIHRLGRTARAGKSGHGVVLMAPYEKNHMM--------KKELQDLPMQESACPPLSPELQAAMDGALRNVSQNNSLRESAEQAYRAWLGYYNGNLRKAGWDKKTLVQEANQ-WAKDI-------GLKEQPKLLKKTVGKMGLKGVPGLLLE 634
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A5A8E470_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E470_CAFRO) HSP 1 Score: 137 bits (346), Expect = 2.860e-34 Identity = 103/244 (42.21%), Postives = 129/244 (52.87%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLG-----PTWPPKRPTEVGEVKAGDLKGLPLVPST--------ADSTLTGGAAAGIRVTHGV--------------------------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAKGARGG 615 R SQA R RA+ F+ A A LFSSDVSARGMD+P VT V+Q GLT REQYIHRLGRTARAGKAG G L++ P+EA + G P P P + GL L P+ AD++ G A I G+ A+ +W+G+Y R++ W A +VA AN W G+ + GL + P L R+TVGKMGLRG PG+ EEAKG+ GG Sbjct: 291 RKSQAQRMRAADTFKSAPK-AILFSSDVSARGMDFPDVTMVMQVGLTDREQYIHRLGRTARAGKAGRGCLVLLPDEAAHMAGMLRGLPIRSPLDPASTAIPGSIADAGLHLAPARGGPWPMAHADASGPGAGAEHIAAAIGMVGGGTGAGPVRASASDRDSMASLAAMAYSSWIGYYKGAARKVGWSPAQMVAVAND-WFAGAGGL----GLREVPILQRRTVGKMGLRGVPGIREEAKGSGGG 528
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A9TI18_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TI18_PHYPA) HSP 1 Score: 134 bits (338), Expect = 1.190e-33 Identity = 98/203 (48.28%), Postives = 115/203 (56.65%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGL-TSREQYIHRLGRTARAGKAGGGLLLVAPEEA---RALLGPTWPPKRPTEVG-EVKAGDLKGLPLVPSTADSTLTGGAAAGIRVTHGVAFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFG---GLAQPPTLPRKTVGKMGLRGTPGL 585 R SQ+ R +AS +FR+ GG +F+SDVSARG+DYP VT VVQ G SREQYIHRLGRT RAGK G GLLL+ P E R+L T + TEV +++A K L + S A+ AWLG+YNS R LKWDK TLV AN LF GL QPP L +KTVG MGLR PGL Sbjct: 302 RKSQSFRTKASNEFRNHPGGVIMFTSDVSARGVDYPDVTFVVQVGTPASREQYIHRLGRTGRAGKEGRGLLLLTPWEEVFLRSLNDITITQSKGTEVSPDIEAKVNKALGYIDEDTKSK---------------AYQAWLGYYNS-CRLLKWDKQTLVKRAN-----------LFSSTLGLRQPPALLKKTVGMMGLRNVPGL 477
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Match: A0A5A8D4G7_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4G7_CAFRO) HSP 1 Score: 135 bits (341), Expect = 1.400e-33 Identity = 101/241 (41.91%), Postives = 127/241 (52.70%), Query Frame = 1 Query: 1 RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREQYIHRLGRTARAGKAGGGLLLVAPEEARALLG-----PTWPPKRPTEVGEVKAGDLKGLPLVPST--------ADSTLTGGAAAGIRVTHGV--------------------------AFVAWLGFYNSNLRRLKWDKATLVANANALWADGSDPVPLFGGLAQPPTLPRKTVGKMGLRGTPGLIEEAKGA 606 R SQA R RA+ F+ A A LFSSDVSARGMD+P VT V+Q GLT REQYIHRLGRTARAGKAG G L++ P+EA + G P P P + GL L P+ AD++ G A I G+ A+ +W+G+Y R++ W A +VA AN W G+ + GL + P L R+TVGKMGLRG PG+ EEAKG+ Sbjct: 291 RKSQAQRMRAADTFKSAPK-AILFSSDVSARGMDFPDVTMVMQVGLTDREQYIHRLGRTARAGKAGRGCLVLLPDEAAHMAGMLRGLPIRSPLDPASTAIPGSIADAGLHLAPARGGPWPMAHADASGPGAGAEHIAAAIGMVGGGTGAGPVRASASDRDSMASLAAMAYSSWIGYYKGAARKVGWSPAQMVAVAND-WFAGAGGL----GLREVPILQRRTVGKMGLRGVPGIREEAKGS 525 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95642.22055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig95642.22055.1 >prot_M-pyrifera_M_contig95642.22055.1 ID=prot_M-pyrifera_M_contig95642.22055.1|Name=mRNA_M-pyrifera_M_contig95642.22055.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp RNSQAARARASKQFRDADGGAFLFSSDVSARGMDYPGVTAVVQFGLTSREback to top mRNA from alignment at M-pyrifera_M_contig95642:3..728- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig95642.22055.1 ID=mRNA_M-pyrifera_M_contig95642.22055.1|Name=mRNA_M-pyrifera_M_contig95642.22055.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig95642:3..728- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig95642:3..728- >mRNA_M-pyrifera_M_contig95642.22055.1 ID=mRNA_M-pyrifera_M_contig95642.22055.1|Name=mRNA_M-pyrifera_M_contig95642.22055.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1248bp|location=Sequence derived from alignment at M-pyrifera_M_contig95642:3..728- (Macrocystis pyrifera P11B4 male)back to top |