prot_M-pyrifera_M_contig95582.22033.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95582.22033.1
Unique Nameprot_M-pyrifera_M_contig95582.22033.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length51
Homology
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BLAST of mRNA_M-pyrifera_M_contig95582.22033.1 vs. uniprot
Match: D7G3J7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3J7_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 3.120e-17
Identity = 36/49 (73.47%), Postives = 40/49 (81.63%), Query Frame = 0 
Query:    1 CDPSAECVNTIGSYKCSCPLGEACVPWSGAGFCQNVTSSADCCTVDEEQ 49
            C  SAECVNTIGSY+CSCP  EACVP SG G+C  + SSADCCTVDEE+
Sbjct:  136 CHASAECVNTIGSYECSCPGREACVPRSGLGYCTGINSSADCCTVDEEK 184
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95582.22033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3J7_ECTSI3.120e-1773.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 1..21
e-value: 1.9E-6
score: 27.9
NoneNo IPR availableGENE3D2.10.25.10coord: 1..49
e-value: 3.9E-7
score: 32.0
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95582contigM-pyrifera_M_contig95582:372..524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95582.22033.1mRNA_M-pyrifera_M_contig95582.22033.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95582 372..524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95582.22033.1 ID=prot_M-pyrifera_M_contig95582.22033.1|Name=mRNA_M-pyrifera_M_contig95582.22033.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=51bp
CDPSAECVNTIGSYKCSCPLGEACVPWSGAGFCQNVTSSADCCTVDEEQV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom