prot_M-pyrifera_M_contig95257.21975.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig95257.21975.1
Unique Name	prot_M-pyrifera_M_contig95257.21975.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	133

Homology

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BLAST of mRNA_M-pyrifera_M_contig95257.21975.1 vs. uniprot
Match: A0A2P6N761_9EUKA (Cyclin domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N761_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 1.200e-5
Identity = 38/127 (29.92%), Postives = 59/127 (46.46%), Query Frame = 0

Query:    4 REKVYDATFVDPPDIQPGRAANAHASLGLVSSVQSYRPAVELEAELDSRFLERHDWLPPELNVRLSSLRKVKHLLVQTAERIQAELVIPALAFSLLDRLILARRINAATLAPVAAATFLLAFKFLQP 130
            +   YD  F+D PD+  G+            S+  +    +L+++L+ +F  +H W+     V+L  +RKVK  L       + +    ALA+ LLDRLI+   I    L P A    LL+ KF  P
Sbjct:  251 KRSQYDPDFIDDPDLTTGKHKTVLNLPFYRGSIIPFVRPDDLKSDLNDQFRRKHPWI--NAGVKLYKIRKVKKKLYDVIVDTKLDFSFLALAYVLLDRLIMRNVIFRENLKPYAVVCLLLSIKFNDP 375

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig95257.21975.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig95257.21975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2P6N761_9EUKA	1.200e-5	29.92	Cyclin domain-containing protein n=1 Tax=Planoprot...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22896:SF0	CYCLIN DOMAIN-CONTAINING PROTEIN	coord: 7..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..107
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 108..128
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 129..133
None	No IPR available	TMHMM	TMhelix		coord: 103..125
IPR012388	CDK5 and ABL1 enzyme substrate 1/2	PANTHER	PTHR22896	CDK5 AND ABL1 ENZYME SUBSTRATE 1	coord: 7..127
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 63..128

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig95257	contig	M-pyrifera_M_contig95257:60..458 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig95257.21975.1	mRNA_M-pyrifera_M_contig95257.21975.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig95257 60..458 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig95257.21975.1 ID=prot_M-pyrifera_M_contig95257.21975.1|Name=mRNA_M-pyrifera_M_contig95257.21975.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=133bp
MANREKVYDATFVDPPDIQPGRAANAHASLGLVSSVQSYRPAVELEAELD
SRFLERHDWLPPELNVRLSSLRKVKHLLVQTAERIQAELVIPALAFSLLD
RLILARRINAATLAPVAAATFLLAFKFLQPGTS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012388	CABLES1/2
IPR036915	Cyclin-like_sf