prot_M-pyrifera_M_contig95106.21950.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig95106.21950.1
Unique Nameprot_M-pyrifera_M_contig95106.21950.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A5A8DM70_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DM70_CAFRO)

HSP 1 Score: 98.6 bits (244), Expect = 9.070e-22
Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 0
Query:   38 VRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHDRCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTVGVWR 124
            +R G     L GH G  Y   ++ E GGRR+++GGHD  + IWD  +GT++Q ++  HRSY+LGL  R DG +FA+ASGDRTVG+WR
Sbjct:  250 LRTGSCMHVLAGHVGPAYSVTFTHEGGGRRIITGGHDTNIIIWDARSGTVIQKMEMTHRSYILGLAARSDGLVFASASGDRTVGLWR 336          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A482UE17_9ARCH (WD40 repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UE17_9ARCH)

HSP 1 Score: 91.3 bits (225), Expect = 6.270e-19
Identity = 42/122 (34.43%), Postives = 62/122 (50.82%), Query Frame = 0
Query:    3 REIKGHEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHDRCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTVGVWR 124
            R   GH GPV D R +  G +  ++S DGS R+W    G     LRGH  ++    +SP+ GGR                  G ++Q ++ +H  ++  L +R DG  F +ASGD+TVG+WR
Sbjct:  244 RSFIGHTGPVYDARFNHVGNRIVTASADGSARVWEFGSGECIRVLRGHGSALRSALFSPDGGGRXXXXXXXXXXXXXXXXXXGLLMQRMERVHAGFIHRLAYRTDGVFFLSASGDKTVGMWR 365          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: UPI000C76E6B7 (pre-mRNA 3' end processing protein WDR33-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C76E6B7)

HSP 1 Score: 82.4 bits (202), Expect = 6.930e-16
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 0
Query:    5 IKGHEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHD--RCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTV 120
             + H+ PV  +   P  TKFAS S DG+VRIW+ +  +    LRGH   V CC W P++G   ++SG  D  + + +WD   GT+L  + + H+S V+   F  +G+   TAS D  +
Sbjct:   32 FQAHKEPVRQVAFCPTDTKFASCSDDGTVRIWDFQRCMEERVLRGHGSDVKCCDWHPQKG--IVVSGSKDNQQPLKLWDPRNGTVLTTI-HAHKSTVMDCRFNRNGNWLLTASRDHLL 146          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: R4XB74_TAPDE (U3 snoRNP-associated protein Utp13 n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4XB74_TAPDE)

HSP 1 Score: 82.0 bits (201), Expect = 1.140e-15
Identity = 40/123 (32.52%), Postives = 62/123 (50.41%), Query Frame = 0
Query:    3 REIKGHEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGR--RLLSGGHDRCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTVGVW 123
            R++K HE PV+ I      T  A+   +G+V++W++RGG      +GH G +    +    G R  RL SG  D  + +WD+ +   L  L N H S + GL F  DG+   + S D+ +  W
Sbjct:   94 RQVKAHESPVISIETDSTSTLVATGGAEGTVKVWDIRGGFVTHNFKGHGGVISALRFYGRAGSRTWRLASGADDCKIRVWDLVSSKCLATLDN-HSSVIRGLDFSDDGNTLISGSRDQVLNTW 215          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A8I6RUI8_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RUI8_CIMLE)

HSP 1 Score: 76.6 bits (187), Expect = 8.830e-14
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 0
Query:    8 HEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHD--RCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTV 120
            H+  +  I  SP  +KFAS S DG++++W+        TLRGH   V C  W P++G   ++SG  D  + V +WD  TGT L  + + H+S V+ + +  +G+ F TAS D  +
Sbjct:  218 HQEAIRGISFSPTDSKFASCSDDGTIKVWDFYRCQEERTLRGHGADVKCVHWHPQKG--LIISGSKDNQQPVKLWDPKTGTSLATI-HAHKSTVMDVKWNNNGNWFVTASRDHLL 329          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A0P4VK08_9HEMI (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=2 Tax=Rhodnius TaxID=13248 RepID=A0A0P4VK08_9HEMI)

HSP 1 Score: 75.5 bits (184), Expect = 2.130e-13
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0
Query:    8 HEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHD--RCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTV 120
            H+  +  I  SP  +KFAS S DG+V+IW+         LRGH   V C  W P++G   ++SG  D  + V +WD  TGT L  + + H+S V+ + +  +G+ F TAS D  +
Sbjct:  168 HQEAIRGISFSPTDSKFASCSDDGTVKIWDFYRCQEERILRGHGADVKCIHWHPQKG--LIISGSKDNQQPVKLWDPKTGTSLATI-HAHKSTVMDIKWNNNGNWFVTASRDHLL 279          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A069DWU2_9HEMI (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=2 Tax=Triatominae TaxID=70999 RepID=A0A069DWU2_9HEMI)

HSP 1 Score: 75.5 bits (184), Expect = 2.190e-13
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0
Query:    8 HEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHD--RCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTV 120
            H+  +  I  SP  +KFAS S DG+V+IW+         LRGH   V C  W P++G   ++SG  D  + V +WD  TGT L  + + H+S V+ + +  +G+ F TAS D  +
Sbjct:    9 HQEAIRGISFSPTDSKFASCSDDGTVKIWDFYRCQEERILRGHGADVKCIHWHPQKG--LIISGSKDNQQPVKLWDPKTGTSLATI-HAHKSTVMDIKWNNNGNWFVTASRDHLL 120          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A023F3M6_TRIIF (Putative polyadenylation factor i complex subunit pfs2 (Fragment) n=2 Tax=Triatoma infestans TaxID=30076 RepID=A0A023F3M6_TRIIF)

HSP 1 Score: 75.5 bits (184), Expect = 2.250e-13
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0
Query:    8 HEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHD--RCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTV 120
            H+  +  I  SP  +KFAS S DG+V+IW+         LRGH   V C  W P++G   ++SG  D  + V +WD  TGT L  + + H+S V+ + +  +G+ F TAS D  +
Sbjct:  213 HQEAIRGISFSPTDSKFASCSDDGTVKIWDFYRCQEERILRGHGADVKCIHWHPQKG--LIISGSKDNQQPVKLWDPKTGTSLATI-HAHKSTVMDIKWNNNGNWFVTASRDHLL 324          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A7S0T0E9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T0E9_9CHLO)

HSP 1 Score: 75.1 bits (183), Expect = 2.940e-13
Identity = 45/125 (36.00%), Postives = 60/125 (48.00%), Query Frame = 0
Query:    5 IKGHEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHDRCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDG------SMFATASGDRTVGVW 123
             KGH   +  I  S D     S+S DG++ +W+   G     L GH G+V  CC+    GG R+LSGG D+ V +WDV  G        +  + + G T R  G      S FA+ S DRT  VW
Sbjct:  422 FKGHSKAIRAIAASQDMKTAVSASDDGNLMLWDTVTGQDSGILTGHKGAVLACCF--VSGGERVLSGGKDQAVRVWDV--GGXXXXXVLIAETALQGHTGRITGLASIGRSSFASCSADRTARVW 542          
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Match: A0A8D9ESA5_9HEMI (Pre-mRNA 3' end processing protein WDR33 n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9ESA5_9HEMI)

HSP 1 Score: 74.7 bits (182), Expect = 4.210e-13
Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = 0
Query:    3 REIKGHEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGHSGSVYCCCWSPEEGGRRLLSGGHD--RCVCIWDVATGTILQHLKNLHRSYVLGLTFRFDGSMFATASGDRTVGVW 123
            +  +GH+  V  I  SP  +KFA+ S DG+VR+W+    V    LRGH   V C  W P +    ++SG  D  + V +WD   G  L  L + H+S V+ L +  +G+   TAS D  + V+
Sbjct:  230 KTFQGHKESVRGISFSPSDSKFATCSDDGTVRVWDFYRCVEEKVLRGHGADVKCVDWHPYKS--LIVSGSKDNQQPVKLWDPKAGQALATL-HAHKSTVMDLAWNQNGNWLVTASRDHLLKVF 349          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig95106.21950.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DM70_CAFRO9.070e-2250.57Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A482UE17_9ARCH6.270e-1934.43WD40 repeat domain-containing protein n=1 Tax=arch... [more]
UPI000C76E6B76.930e-1636.44pre-mRNA 3' end processing protein WDR33-like n=1 ... [more]
R4XB74_TAPDE1.140e-1532.52U3 snoRNP-associated protein Utp13 n=1 Tax=Taphrin... [more]
A0A8I6RUI8_CIMLE8.830e-1435.65Uncharacterized protein n=1 Tax=Cimex lectularius ... [more]
A0A0P4VK08_9HEMI2.130e-1336.52Putative polyadenylation factor i complex subunit ... [more]
A0A069DWU2_9HEMI2.190e-1336.52Putative polyadenylation factor i complex subunit ... [more]
A0A023F3M6_TRIIF2.250e-1336.52Putative polyadenylation factor i complex subunit ... [more]
A0A7S0T0E9_9CHLO2.940e-1336.00Hypothetical protein (Fragment) n=1 Tax=Mantoniell... [more]
A0A8D9ESA5_9HEMI4.210e-1334.96Pre-mRNA 3' end processing protein WDR33 n=2 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 68..82
score: 34.32
coord: 24..38
score: 36.27
coord: 111..125
score: 29.43
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..37
e-value: 5.4E-7
score: 39.2
coord: 84..124
e-value: 1.3E-4
score: 31.3
coord: 40..81
e-value: 1.2E-10
score: 51.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 94..123
e-value: 0.019
score: 15.8
coord: 3..37
e-value: 3.3E-8
score: 34.0
coord: 45..81
e-value: 5.5E-6
score: 27.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 5..46
score: 15.789
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 92..126
score: 11.143
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 47..90
score: 13.483
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..126
e-value: 8.8E-41
score: 142.0
IPR039241Ribosomal RNA-processing protein Rrp9-likePANTHERPTHR19865U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2coord: 49..123
coord: 6..89
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 68..82
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 5..126
score: 31.349
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig95106contigM-pyrifera_M_contig95106:303..680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig95106.21950.1mRNA_M-pyrifera_M_contig95106.21950.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig95106 303..680 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig95106.21950.1 ID=prot_M-pyrifera_M_contig95106.21950.1|Name=mRNA_M-pyrifera_M_contig95106.21950.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
LRREIKGHEGPVLDIRISPDGTKFASSSQDGSVRIWNVRGGVPHSTLRGH
SGSVYCCCWSPEEGGRRLLSGGHDRCVCIWDVATGTILQHLKNLHRSYVL
GLTFRFDGSMFATASGDRTVGVWRGQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR039241Rrp9-like
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf