prot_M-pyrifera_M_contig9482.21874.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9482.21874.1
Unique Nameprot_M-pyrifera_M_contig9482.21874.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length275
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig9482.21874.1 vs. uniprot
Match: D8LQP9_ECTSI (DUF1115 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQP9_ECTSI)

HSP 1 Score: 191 bits (485), Expect = 1.960e-55
Identity = 138/281 (49.11%), Postives = 169/281 (60.14%), Query Frame = 0 
Query:    3 GEKSAMLSLQEVLTMQLDEMELLETAYPEITFDTPDPRPNMRAALA---EAASLGQQGREDSCLEDALATVPLLSFRCPLS-REAHLRVRLPRRYPEDKLEATVEGTPRLSALSRREIAAAATAAAVGDGEASGLSGERRSEPQCLQVLGEAMRKSDDLAEKESAGRVPSSSLAGVSTIGDGRGAAGAHYGGESGEARRKEGSNVSSTRDQXXXXXXXXXXQPPRDLGAGPAI---KGEEEVGAV-LGRRLIYSHHIIAQQKRTGIVKAARELGLGGFSKV 275
            GE+ A +SL E LTMQLDEMELLETAYPE+TFDTPD RP +RAAL    E      Q  E+  L++ALA  PLLSFRC L  +EA LRVRLP  YP+  L   VEGTP+L+  +R+ I+ A T       EA+ LS + R EPQCL+VLG AM+ S DLA++ES G   +S   G   I      +G   GG +  A        SS  ++              ++GA   +    GE +   V LGRRLIYSHHIIA QKRTGI+KAAR+L LGGFSKV
Sbjct:    2 GEEEAKMSLHEALTMQLDEMELLETAYPELTFDTPDARPLLRAALDGSFERQHTSDQKAEEIRLQEALADTPLLSFRCTLPLKEAQLRVRLPHEYPDAPLLVKVEGTPQLTVSARKAISDAVT------DEATRLSRDNRREPQCLEVLGAAMQTSVDLADRESTGG-QASQAGGCHEI------SGCGGGGMTTSAAPCLPHTCSSEGEERGISHHS------NNVGATKRVVSNSGEPDGEPVFLGRRLIYSHHIIATQKRTGIMKAARDLRLGGFSKV 263
[Close]
BLAST of mRNA_M-pyrifera_M_contig9482.21874.1 vs. uniprot
Match: A0A6H5KV49_9PHAE (DUF1115 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV49_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.880e-43
Identity = 120/259 (46.33%), Postives = 146/259 (56.37%), Query Frame = 0 
Query:   22 MELLETAYPEITFDTPDPRPNMRAALA---EAASLGQQGREDSCLEDALATVPLLSFRCPLS-REAHLRVRLPRRYPEDKLEATVEGTPRLSALSRREIAAAATAAAVGDGEASGLSGERRSEPQCLQVLGEAMRKSDDLAEKES-AGRVPSSSLAGVSTIGDGRGAAGAHYGGESGEARRKEGSNVSSTRDQXXXXXXXXXXQPPRDLGAGPAIKGEEEVGAVLGRRLIYSHHIIAQQKRTGIVKAARELGLGGFSKV 275
            MELLETAYPE+TFDTPD RP +RAAL    E      Q  E++ L++ALA  PLLSFRC L  +EA LRVRLP  YP+  L  T+EGTP+L+  +R+ I  A T       +A+ LS +RR EPQCL+VLG AM+ S DLA +ES AG               G G   +     +        S+    RD           +      A P  +GE      LGRRLIYSHHIIA QKR GI+KAAR+L LGGFSKV
Sbjct:    1 MELLETAYPELTFDTPDARPLLRAALDGSFERQHTSDQKAEETRLKEALADTPLLSFRCTLPLKEAQLRVRLPHDYPDTLLLVTIEGTPQLTVSARKAITDAVT------DKATRLSRDRRREPQCLEVLGAAMQTSADLAGRESTAGXXXXXXXXXXXXXCGGGGMTSS-----TAPCLPYTCSSEGEERDVSHLTNSVGATKSVISKSAQP--EGEP---VFLGRRLIYSHHIIATQKRAGIIKAARDLRLGGFSKV 243
[Close]
BLAST of mRNA_M-pyrifera_M_contig9482.21874.1 vs. uniprot
Match: A0A1V9ZWL6_9STRA (YSHH motif n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWL6_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 7.960e-5
Identity = 25/39 (64.10%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:  237 VGAVLGRRLIYSHHIIAQQKRTGIVKAARELGLGGFSKV 275
            V  VLGRR IY HHIIA  KR  ++  A+ELGLGGFSK+
Sbjct:   39 VNPVLGRRAIYFHHIIATSKRRVVLDWAKELGLGGFSKI 77
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9482.21874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQP9_ECTSI1.960e-5549.11DUF1115 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KV49_9PHAE1.880e-4346.33DUF1115 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1V9ZWL6_9STRA7.960e-564.10YSHH motif n=1 Tax=Thraustotheca clavata TaxID=745... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 7..125
e-value: 1.8E-5
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9482contigM-pyrifera_M_contig9482:114..3481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9482.21874.1mRNA_M-pyrifera_M_contig9482.21874.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9482 114..3481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9482.21874.1 ID=prot_M-pyrifera_M_contig9482.21874.1|Name=mRNA_M-pyrifera_M_contig9482.21874.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
MSGEKSAMLSLQEVLTMQLDEMELLETAYPEITFDTPDPRPNMRAALAEA
ASLGQQGREDSCLEDALATVPLLSFRCPLSREAHLRVRLPRRYPEDKLEA
TVEGTPRLSALSRREIAAAATAAAVGDGEASGLSGERRSEPQCLQVLGEA
MRKSDDLAEKESAGRVPSSSLAGVSTIGDGRGAAGAHYGGESGEARRKEG
SNVSSTRDQRQQQQQERREQPPRDLGAGPAIKGEEEVGAVLGRRLIYSHH
IIAQQKRTGIVKAARELGLGGFSKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD