prot_M-pyrifera_M_contig94710.21850.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94710.21850.1
Unique Nameprot_M-pyrifera_M_contig94710.21850.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length219
Homology
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A1V9YDV8_9STRA (DNA repair and recombination protein RAD54 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDV8_9STRA)

HSP 1 Score: 230 bits (587), Expect = 1.350e-66
Identity = 119/220 (54.09%), Postives = 147/220 (66.82%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKEQATALSSDDLRDLFSVPTATISDTHDKVACVRCGELEREAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCA-RGLVSFVF 219
            R+K VD FNDP  + F FLLSSKAGGCGLNL+GANRLVLFDPDWNPA DKQAAAR+WR+GQ K+CF+YRF+ TGT+EEKI+QRQLSKEGLQ+IV D KE+  +LSS DL+ LF     T SDTHD++ C RC                             P  + DV    + +  +PQIG PAEEDL  W+HH+ +D++ D ++R+  A   LVSFVF
Sbjct:  566 RKKLVDVFNDPKTNSFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARIWREGQKKQCFIYRFVATGTLEEKIFQRQLSKEGLQSIV-DDKEEVNSLSSKDLKKLFVFMQETDSDTHDQLKCRRC-----------------------------PALDEDVSELDKKQLTQPQIGMPAEEDLNNWNHHYSYDTVADEIMREAQAGSSLVSFVF 755          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A2C9VLL7_MANES (Helicase C-terminal domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9VLL7_MANES)

HSP 1 Score: 218 bits (555), Expect = 1.670e-66
Identity = 124/232 (53.45%), Postives = 150/232 (64.66%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKE-----QATALSSDDLRDLFSVPTATISDTHDKVACVRC--------GELEREAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARGLVSFVF 219
            RQK V+ FNDP +D F+FLLSSKAGGCGLNL+G NRLVLFDPDWNPANDKQAAARVWRDGQ KR ++YRFL+TGTIEEK+YQRQ+SKEGLQ ++  ++      Q   LS++DLRDLFS      S+ H+ + C RC          +E E     C  +  DV  + G  G      A VLR+  LR    Q+G P EEDL  W HHF   S+ D +L QV A   V+FVF
Sbjct:   34 RQKLVNRFNDPAKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQNDSLVSQGNFLSTEDLRDLFSFHENVRSEIHENMDCARCLFHDDGPRNIIEGEGSISRCQSE-QDVSDIGGFAG-----IAGVLRK--LRSSEKQVGTPLEEDLVSWGHHFNASSVPDAIL-QVSAGDEVTFVF 256          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A8K1C4Y7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4Y7_PYTOL)

HSP 1 Score: 226 bits (577), Expect = 6.450e-65
Identity = 127/230 (55.22%), Postives = 149/230 (64.78%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKEQATALSSDDLRDLFSVPTATISDTHDKVACVRCG------ELEREAKHGSCGGDGDDVEGVDG--GGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCA---RGLVSFVF 219
            R+K VD FNDP  + F FLLSSKAGGCGLNL+GANRLVLFDPDWNPA DKQAAARVWR+GQ K C++YRFL TGT+EEKI+QRQLSKEGLQ IV D KE+  +LSS DL+ LF +   T+SDTHD++ C RC       E + E           D +G D   G  DG LP          + Y PQIG P EEDL  W HH  +DS+ D V++   A     LVSF F
Sbjct:  616 RKKLVDTFNDPTTNSFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARVWREGQKKMCYVYRFLATGTLEEKIFQRQLSKEGLQNIV-DDKEEVNSLSSKDLKRLFILRRDTLSDTHDQLKCERCQWRNPGEECDHEIIE-------VDQDGTDDSKGSSDGELPPE--------KHYHPQIGMPPEEDLNSWGHHRAYDSVDDEVMQHAIADLREALVSFAF 829          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A0P1AJX3_PLAHL (Dna repair and recombination protein rad54-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJX3_PLAHL)

HSP 1 Score: 226 bits (575), Expect = 1.040e-64
Identity = 129/232 (55.60%), Postives = 154/232 (66.38%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKEQATALSSDDLRDLFSVPTATISDTHDKVACVRCGELEREAKHGSCGGDG--------DDVEGVDGGGGDGPLPEADVLRRQRL--RGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLR---QVCARGLVSFVF 219
            R+K VD FNDP  + F FLLSSKAGGCGLNL+GANRLVLFDPDWNPA DKQAAARVWR+GQTK C++YRFL TGT+EEKI+QRQLSKEGLQ IV D KE+  +LSS DL+ LF     T+SDTHD++ C RC    RE  H S   D         DDV   + G  +  L E ++  ++    +GY PQIG P EEDL  W HH  + S+ D V++   Q     LVSF F
Sbjct:  602 RKKLVDTFNDPTTNSFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARVWREGQTKMCYVYRFLATGTLEEKIFQRQLSKEGLQNIV-DDKEEVNSLSSKDLKRLFVFRKDTMSDTHDQLKCDRC--QWREDSHAS---DDKVSSPIVIDDVVTNEKGIENKTLYEKEISSQENATDKGYHPQIGMPPEEDLNNWGHHRSYASVDDEVMQAALQQVENDLVSFAF 827          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A5J5SUV6_GOSBA (Helicase C-terminal domain-containing protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A5J5SUV6_GOSBA)

HSP 1 Score: 218 bits (554), Expect = 1.450e-64
Identity = 126/233 (54.08%), Postives = 153/233 (65.67%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQ-----KEQATALSSDDLRDLFSVPTATISDTHDKVACVRC--------GELER-EAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARGLVSFVF 219
            RQK V+ FND  +D F+FLLSSKAGGCGLNL+G NRLVLFDPDWNPANDKQAAARVWRDGQ KR ++YRFL+TGTIEEK+YQRQ+SKEGLQ ++  +     K Q    S++DLRDLF+      S+ H K+ C RC        GE ER E+++GS G    D E  D GG  G     D     +L+    Q+G P EEDL  W HHF  +S+ D +L Q  A G V+FVF
Sbjct:  191 RQKLVNRFNDSTKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQVDSVKGQGNVFSTEDLRDLFTFYDNVRSEIHGKMNCNRCKNDGSENIGEQERCESENGSYG---SDQEVFDIGGFAGIAGCLD-----KLKSSEKQVGSPLEEDLVSWGHHFHSESVPDSIL-QASAGGEVTFVF 414          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A1Y1I9I1_KLENI (Putative SNF2 family DNA repair protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9I1_KLENI)

HSP 1 Score: 224 bits (570), Expect = 3.040e-64
Identity = 125/229 (54.59%), Postives = 148/229 (64.63%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKE----QATALSSDDLRDLFSVPTATISDTHDKVACVRCG------ELEREAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARGLVSFVF 219
            RQK V +FNDPV D F FLLSSKAGGCGLNL+G NRLVLFDPDWNPANDKQAAARVWRDGQ KR F+YRFL TGTIEEK+YQRQ+SKEGLQ +V  +K+    Q  A+SS++LRDLF     + SDTHD + C RC       E E  A         +D+ G            A    R  L+ +  Q+G PAEEDLK W+HH    ++ DRV++ V     VSFVF
Sbjct:  581 RQKLVQKFNDPVPDEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLATGTIEEKVYQRQMSKEGLQQVVDTKKDDDRVQMNAISSEELRDLFKFQEQSSSDTHDSLNCGRCQAGEACTEQEPPAAAEGAPSTAEDIGGF----------AAAAGCRDILKPWERQVGTPAEEDLKSWAHHASPSTVPDRVMQSVAGDD-VSFVF 798          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A067CTJ9_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CTJ9_SAPPC)

HSP 1 Score: 222 bits (566), Expect = 8.650e-64
Identity = 117/220 (53.18%), Postives = 144/220 (65.45%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKEQATALSSDDLRDLFSVPTATISDTHDKVACVRCGELEREAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARG-LVSFVF 219
            R+K VD FNDP  + F FLLSSKAGGCGLNL+GANRLVLFDPDWNPA DKQAAAR+WR+GQ K+CF+YRF+ TGT+EEKI+QRQLSKEGLQ+IV D KE+  +LS+ DL+ LF     T SDTHD++ C RC                             P  +  VL   +    RPQI  PAEEDL  W+HH+ ++++ D ++R   A   LVSFVF
Sbjct:  560 RKKLVDVFNDPKTNSFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARIWREGQKKQCFIYRFVATGTLEEKIFQRQLSKEGLQSIV-DDKEEVNSLSTKDLKKLFVFMENTDSDTHDQLKCRRC-----------------------------PNADELVLEENKKLLTRPQIDMPAEEDLNNWNHHYSYETVADDIMRDAQAGSDLVSFVF 749          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A0D2VAF4_GOSRA (Uncharacterized protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A0D2VAF4_GOSRA)

HSP 1 Score: 218 bits (556), Expect = 2.090e-63
Identity = 126/233 (54.08%), Postives = 154/233 (66.09%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQ-----KEQATALSSDDLRDLFSVPTATISDTHDKVACVRC--------GELER-EAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARGLVSFVF 219
            RQK V+ FND  +D F+FLLSSKAGGCGLNL+G NRLVLFDPDWNPANDKQAAARVWRDGQ KR ++YRFL+TGTIEEK+YQRQ+SKEGLQ ++  +     K Q    S++DLRDLF+      S+ H+K+ C RC        GE ER E+++GS G    D E  D GG  G     D     +L+    Q+G P EEDL  W HHF  +S+ D +L Q  A G V+FVF
Sbjct:  362 RQKLVNRFNDSTKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQVDSVKGQGNVFSTEDLRDLFTFYDNVRSEIHEKMNCNRCKNDGSENIGEQERCESENGSSG---SDQEVSDIGGFAGIAGCLD-----KLKSSEKQVGSPLEEDLISWGHHFHSESVPDAIL-QASAGGEVTFVF 585          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A811PLW0_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811PLW0_9POAL)

HSP 1 Score: 209 bits (533), Expect = 2.430e-63
Identity = 116/224 (51.79%), Postives = 146/224 (65.18%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIV----VDQKEQATALSSDDLRDLFSVPTATISDTHDKVACVRCGELEREAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLR-------RQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARG 213
            RQK V++FND  +D F+FLLSSKAGGCGLNLVG NRLVLFDPDWNPANDKQAAARVWRDGQ KR ++YRFL+TGTIEEK+YQRQ+SKEGLQ ++     D K Q ++LS++DLRDLF+      S+ H+ + C RC +    A  G+     D    +      G    AD+ R        Q++   + QIG P EEDL  W HHF   ++ D VL+  C+ G
Sbjct:  139 RQKLVNQFNDLSRDEFVFLLSSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQADNKMQGSSLSTEDLRDLFTFHEHVRSEIHENLKCSRCDKDGNSALDGTGFAATDHKASIP-----GVQDYADIGRFGEISGCLQKMNSAQHQIGRPTEEDLGSWGHHFDPSTVPDTVLQ--CSAG 355          
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Match: A0A1J3CWJ0_NOCCA (Protein CHROMATIN REMODELING 25 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3CWJ0_NOCCA)

HSP 1 Score: 210 bits (535), Expect = 2.950e-63
Identity = 117/234 (50.00%), Postives = 146/234 (62.39%), Query Frame = 0
Query:    1 RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDKQAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQK-----EQATALSSDDLRDLFSVPTATISDTHDKVACVRCGEL----------EREAKHGSCGGDGDDVEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDSMRDRVLRQVCARGLVSFVF 219
            RQK V+  ND  +D F FLLSSKAGGCGLNL+GANRLVLFDPDWNPANDKQAAARVWRDGQ KR ++YRFL+TGTIEEK+YQRQ+SKEGLQ ++  ++      Q   LS++DLRDLFS      S+ H+K++C+RC             E      +C  D +D+ G           +A+      L+    Q+G P EEDL  W HHF   S+ D +L Q  A   V+FVF
Sbjct:   76 RQKLVNRLNDQTKDEFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTNNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCIRCQNASGTENMEEGNETNVDDNACQIDQEDIGGF--------AKDAECF--DLLKDSERQVGTPLEEDLASWGHHFTSKSVPDAIL-QASAGDEVTFVF 298          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94710.21850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1V9YDV8_9STRA1.350e-6654.09DNA repair and recombination protein RAD54 n=1 Tax... [more]
A0A2C9VLL7_MANES1.670e-6653.45Helicase C-terminal domain-containing protein n=1 ... [more]
A0A8K1C4Y7_PYTOL6.450e-6555.22Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AJX3_PLAHL1.040e-6455.60Dna repair and recombination protein rad54-like n=... [more]
A0A5J5SUV6_GOSBA1.450e-6454.08Helicase C-terminal domain-containing protein n=2 ... [more]
A0A1Y1I9I1_KLENI3.040e-6454.59Putative SNF2 family DNA repair protein n=1 Tax=Kl... [more]
A0A067CTJ9_SAPPC8.650e-6453.18Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A0D2VAF4_GOSRA2.090e-6354.08Uncharacterized protein n=3 Tax=Gossypium TaxID=36... [more]
A0A811PLW0_9POAL2.430e-6351.79Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
A0A1J3CWJ0_NOCCA2.950e-6350.00Protein CHROMATIN REMODELING 25 (Fragment) n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 1..59
e-value: 1.1E-7
score: 32.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..110
score: 11.843
NoneNo IPR availableGENE3D3.40.50.300coord: 1..137
e-value: 2.0E-66
score: 226.3
NoneNo IPR availableGENE3D1.20.120.850coord: 93..118
e-value: 2.0E-66
score: 226.3
NoneNo IPR availablePANTHERPTHR45629:SF6DNA REPAIR AND RECOMBINATION PROTEIN RAD54-LIKEcoord: 1..211
NoneNo IPR availablePANTHERPTHR45629FAMILY NOT NAMEDcoord: 1..211
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94710contigM-pyrifera_M_contig94710:2..733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94710.21850.1mRNA_M-pyrifera_M_contig94710.21850.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94710 2..733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94710.21850.1 ID=prot_M-pyrifera_M_contig94710.21850.1|Name=mRNA_M-pyrifera_M_contig94710.21850.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp
RQKKVDEFNDPVQDHFLFLLSSKAGGCGLNLVGANRLVLFDPDWNPANDK
QAAARVWRDGQTKRCFLYRFLTTGTIEEKIYQRQLSKEGLQTIVVDQKEQ
ATALSSDDLRDLFSVPTATISDTHDKVACVRCGELEREAKHGSCGGDGDD
VEGVDGGGGDGPLPEADVLRRQRLRGYRPQIGYPAEEDLKRWSHHFKWDS
MRDRVLRQVCARGLVSFVF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase