prot_M-pyrifera_M_contig94614.21828.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94614.21828.1
Unique Nameprot_M-pyrifera_M_contig94614.21828.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length83
Homology
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A7S3TAY9_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TAY9_EMIHU)

HSP 1 Score: 80.9 bits (198), Expect = 2.200e-17
Identity = 39/60 (65.00%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 AVKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAER 60
            A +SLTP V++ VG LFR +FGD AGWAH LLFAAEL  FRP LPPS+VA+M+  RA E+
Sbjct:   66 ACRSLTPAVYERVGDLFRRRFGDHAGWAHQLLFAAELQQFRPFLPPSLVAEMEAARAEEK 125          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: K0RLY4_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RLY4_THAOC)

HSP 1 Score: 77.0 bits (188), Expect = 1.510e-16
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    7 PRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAERA 61
            PRV+  VG LFR +FG+ AGWAHSLLF AELP FRP+LPP VV +MD+ R  E+A
Sbjct:   32 PRVYGRVGDLFRDRFGERAGWAHSLLFVAELPSFRPVLPPDVVGEMDEWREREQA 86          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A7S1DC35_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DC35_CYCTE)

HSP 1 Score: 75.9 bits (185), Expect = 1.920e-15
Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 VKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDK 54
            VKSLTP ++D VG LFR +F    GWAHSLLF AELP FRP+LP  VV +MDK
Sbjct:   96 VKSLTPTIYDQVGDLFRSRFKQKPGWAHSLLFIAELPSFRPVLPKDVVEEMDK 148          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: F2UB62_SALR5 (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UB62_SALR5)

HSP 1 Score: 77.4 bits (189), Expect = 9.060e-15
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = 0
Query:    1 AVKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVV 49
            A+KSLTPRV+D VG+LFR +FGD AGWAHS+LFAAELP F PLLP   V
Sbjct:  230 AMKSLTPRVYDRVGSLFRQRFGDHAGWAHSVLFAAELPVFAPLLPSHFV 278          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A7S1C0T7_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0T7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.050e-14
Identity = 30/51 (58.82%), Postives = 40/51 (78.43%), Query Frame = 0
Query:    3 KSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMD 53
            K+LTP ++  +G +FR +F + AGWAHSLLF AELP FRP+LPP +V +MD
Sbjct:   54 KTLTPALYGRIGDVFRERFPEYAGWAHSLLFVAELPSFRPVLPPDIVKEMD 104          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A7S2DRB9_9STRA (DNA-(apurinic or apyrimidinic site) lyase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRB9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.100e-14
Identity = 36/60 (60.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    2 VKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAERA 61
            VKSLTP+++D +G LFR +FGD AGWAHSLLFAAEL  F+  LP  +  +MD  RA E+A
Sbjct:  364 VKSLTPKIYDRIGDLFRTRFGDKAGWAHSLLFAAELAAFKSQLPEDMREEMDVFRAQEKA 423          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A7S4A8T7_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A8T7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 4.210e-14
Identity = 38/66 (57.58%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    2 VKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAERAVAKAAR 67
            V S+TP V++ VG LFR +FG  AGWAH++LFAAELP FR  LP +VV +MD  R  E+  AK AR
Sbjct:  268 VASITPTVYERVGDLFRDRFGPTAGWAHAVLFAAELPAFRSALPAAVVEEMDAFRDDEKRAAKEAR 333          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A6U6FTQ8_9STRA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6FTQ8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.100e-13
Identity = 41/71 (57.75%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    2 VKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAERAVAKAARLEKKA 72
            VKSLTP V+  VG +FR +F   AGWAHSLLF AELP FRP LP  +V +MD  R  E A   A R EK A
Sbjct:  496 VKSLTPTVYKRVGNIFRRRFSSHAGWAHSLLFVAELPSFRPALPGDIVEEMDLWRQQELARKAAKRAEKAA 566          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A0A0G4ECR9_VITBC (DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECR9_VITBC)

HSP 1 Score: 73.2 bits (178), Expect = 2.720e-13
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 AVKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAERAVAKAARLEKKARR 74
            + KSLTP V+D VG LFR ++G  AGWAHSLLF AELP FR  LP S+  +M +   +E+   K  R  +K RR
Sbjct:  344 SAKSLTPAVYDRVGDLFRDRYGSRAGWAHSLLFTAELPAFRARLPASLQQEMSEFAVSEKEAKKTERAARKRRR 417          
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Match: A9V852_MONBE (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9V852_MONBE)

HSP 1 Score: 72.4 bits (176), Expect = 5.030e-13
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    3 KSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVAQMDKIRAAERA 61
            +SLTP ++  VG LFR ++G  AGWAHSLLFAAELP F P LP  +VA +   R AE+A
Sbjct:  298 RSLTPTIYKRVGDLFRARYGSYAGWAHSLLFAAELPAFAPCLPSELVADIKAFRLAEKA 356          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94614.21828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3TAY9_EMIHU2.200e-1765.00Hypothetical protein (Fragment) n=1 Tax=Emiliania ... [more]
K0RLY4_THAOC1.510e-1665.45Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S1DC35_CYCTE1.920e-1566.04Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F2UB62_SALR59.060e-1573.47DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A7S1C0T7_9STRA3.050e-1458.82Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2DRB9_9STRA3.100e-1460.00DNA-(apurinic or apyrimidinic site) lyase (Fragmen... [more]
A0A7S4A8T7_9STRA4.210e-1457.58DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=... [more]
A0A6U6FTQ8_9STRA2.100e-1357.75DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A0G4ECR9_VITBC2.720e-1351.35DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=... [more]
A9V852_MONBE5.030e-1357.63DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..82
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminalGENE3D1.10.1670.10coord: 1..37
e-value: 5.0E-9
score: 38.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94614contigM-pyrifera_M_contig94614:64..312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94614.21828.1mRNA_M-pyrifera_M_contig94614.21828.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94614 64..312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94614.21828.1 ID=prot_M-pyrifera_M_contig94614.21828.1|Name=mRNA_M-pyrifera_M_contig94614.21828.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp
AVKSLTPRVHDAVGALFRGKFGDMAGWAHSLLFAAELPCFRPLLPPSVVA
QMDKIRAAERAVAKAARLEKKARREAKRAAAEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023170HTH_base_excis_C