prot_M-pyrifera_M_contig94530.21814.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94530.21814.1
Unique Nameprot_M-pyrifera_M_contig94530.21814.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length235
Homology
BLAST of mRNA_M-pyrifera_M_contig94530.21814.1 vs. uniprot
Match: A0A7C8AID2_9BACT (Uncharacterized protein n=2 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8AID2_9BACT)

HSP 1 Score: 82.4 bits (202), Expect = 2.250e-14
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 0
Query:    3 ESDGAGVFHLSGLSM-RRHMVRASLGEQSAQEPCLIYDHAPVAELILVMSSNQGIAGIVRDEDGNPVAGAQLYPLIYNGKPVARYRQIGNSTNS--DQEGHFAFDALDEGQWELYAMAEGYSATLSAPFPTGTTVGEIVLKSGVLISGQVLKDG 153
            ++D  G +  +GL + +++ ++A+     + +   + D AP  E+   +     I G VR+E G P+A A LYP    G+      Q G    S  D EGHFA  A   G W L+  A+GY+   +  FP GT   EIVL  G   SG VL +G
Sbjct:  140 QADAKGKYEATGLPLDKQYRLKAAAPSGFSVKRTYLIDAAPEREVNFTLEDGGSIEGWVRNEAGEPIADASLYPSQREGQDGGIPGQQGQDLRSITDDEGHFALHA-GVGSWRLFVKADGYATMETPSFPIGTRDAEIVLTRGGSASGTVLHEG 292          
BLAST of mRNA_M-pyrifera_M_contig94530.21814.1 vs. uniprot
Match: A0A7V7ECF5_9BACT (Sigma-70 family RNA polymerase sigma factor n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V7ECF5_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 1.760e-11
Identity = 71/249 (28.51%), Postives = 114/249 (45.78%), Query Frame = 0
Query:    4 SDGAGVFHLSGLSMRRHM-VRASLGEQSAQEPCLIYDHAPVAELILVMSSNQGIAGIVRDEDGNPVAGAQLYPLIYNGKPVARY--RQIGNSTNSDQEGHFAFDALDEGQWELYAMAEGYSATLSAPFPTGTTVGEIVLKSGVLISGQVLKDGATASEVRVSLSREGLPAPPLI------------ALSSRDGSFAYAAVAPGSYSLSATKGDAVLVDSPLNLAV--GTEPVTDLSLNLVTGGILRGTL 235
            +D AG + ++ + +   + ++A+     A +   +    P  E+  V+     IAG VR+E G  +  A LYP     +  A    + I   T +D EG FA   L EG W+L+  AE Y+ T +    TGT   EIVL  G  ++G+V+           +  RE LP   ++            +LS  DG FA  A+  G Y  S      V    P++ +V  GTE  + L+L+++ GG++ G +
Sbjct:  381 TDAAGRYEVANIPLEIPLKLKATCPSGFAVQGASLSRSEPKKEVNFVLEPGGVIAGWVRNEAGEGIPEAFLYPCEMAERKGALVGGKGIDLRTATDAEGRFAIH-LPEGAWKLFVKAEAYATTETEFLRTGTLDNEIVLTEGSTVTGRVIH----------ATPREQLPGVWVLVRSKIYWQNQYRSLSGADGQFAIGALQNGDYVASVEDSIYVSTGGPVSFSVSDGTE-TSPLTLDVLEGGVVTGRI 617          
BLAST of mRNA_M-pyrifera_M_contig94530.21814.1 vs. uniprot
Match: UPI001CD02DA1 (carboxypeptidase-like regulatory domain-containing protein n=1 Tax=Cystobacter gracilis TaxID=394092 RepID=UPI001CD02DA1)

HSP 1 Score: 61.6 bits (148), Expect = 2.570e-7
Identity = 70/236 (29.66%), Postives = 106/236 (44.92%), Query Frame = 0
Query:    1 ETESDGAGVFHLSGLSMRRHMVRASLGEQSAQEPCLIYDHAPVAELILVMSSNQGIAGIVRDEDGNPVAGAQLYPLIYNGKPVARYRQIGNSTNSDQEGHFAFDALDEGQWELYAMAEGYSATLSAPFPTGTTVGEIVLKSGVLISGQVLKDGATASEVRVSLSREGLPAPPLIAL-SSRDGSFAYAAVAPGSYSLSATKGDAVLVDSPLNLAVGTEPVTDLSLNLVTGGILRGTL 235
            ET +   G F L+GL      + A LGEQ AQ    +   A   EL+L     +   GIV D +  PV G  L  L        ++      T S ++G F    L +G++ L A  EG+  T  +   +     ++VL     ++G+VL+DGA A +V VS+  E         L +S +G F+   + P +Y  +A +     VD  + L   TEP  +L LNL     + GT+
Sbjct:  138 ETVTAADGAFVLAGLPEGDFTLWA-LGEQGAQLQSGVKAGAQAVELLL--DEGRMWEGIVVDPEEQPVEGVALTILH-------KWHTRFFDTRSGEDGRFRIGPLPKGEYALTAEREGWLPTFRSHGFSKPLKSKVVLVRPSRLAGRVLRDGAPAPDVEVSVKAEQCVTFTEQKLRTSAEGRFSLERLGPCTYEFTAERDGLYAVDQ-VELEP-TEPSPELVLNLGQALHMEGTV 361          
BLAST of mRNA_M-pyrifera_M_contig94530.21814.1 vs. uniprot
Match: A0A5B9WE53_9BACT (Thiol-disulfide oxidoreductase n=1 Tax=Aquisphaera giovannonii TaxID=406548 RepID=A0A5B9WE53_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.580e-6
Identity = 43/146 (29.45%), Postives = 61/146 (41.78%), Query Frame = 0
Query:    3 ESDGAGVFHLSGLSMRRHMVRASL-GEQSAQEPCLIYDHAPVAELILVMSSNQGIAGIVRDEDGNPVAGAQLYP-----LIYNGKPVARYRQIGNSTNSDQEGHFAFDALDEGQWELYAMAEGYSATLSAPFPTGTTVGEIVLKSG 142
            ESDG G F + GL    ++V+ +  G   A+    +      A     M     IAG+VRD  G PVAGA + P      + +      +  I   T  D +G F F  L EG++ L   A G+        P GT    + L+ G
Sbjct:  584 ESDGDGRFEIPGLCKGGYLVKVTAPGRAWAERKVFVGPDLAPAPADFEMKQGDTIAGVVRDRQGKPVAGATVTPDGRQNFVGDEMSSTVHPHIPGVTTGD-DGRFRFSNLQEGRYLLKIEAPGFKPLEPDAIPAGTQDATLTLEPG 728          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94530.21814.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7C8AID2_9BACT2.250e-1433.77Uncharacterized protein n=2 Tax=Candidatus Hydroge... [more]
A0A7V7ECF5_9BACT1.760e-1128.51Sigma-70 family RNA polymerase sigma factor n=1 Ta... [more]
UPI001CD02DA12.570e-729.66carboxypeptidase-like regulatory domain-containing... [more]
A0A5B9WE53_9BACT2.580e-629.45Thiol-disulfide oxidoreductase n=1 Tax=Aquisphaera... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1120coord: 54..140
e-value: 5.8E-8
score: 35.0
NoneNo IPR availablePFAMPF13620CarboxypepD_regcoord: 56..124
e-value: 7.3E-9
score: 35.8
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 49..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94530contigM-pyrifera_M_contig94530:36..740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94530.21814.1mRNA_M-pyrifera_M_contig94530.21814.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94530 36..740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94530.21814.1 ID=prot_M-pyrifera_M_contig94530.21814.1|Name=mRNA_M-pyrifera_M_contig94530.21814.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=235bp
ETESDGAGVFHLSGLSMRRHMVRASLGEQSAQEPCLIYDHAPVAELILVM
SSNQGIAGIVRDEDGNPVAGAQLYPLIYNGKPVARYRQIGNSTNSDQEGH
FAFDALDEGQWELYAMAEGYSATLSAPFPTGTTVGEIVLKSGVLISGQVL
KDGATASEVRVSLSREGLPAPPLIALSSRDGSFAYAAVAPGSYSLSATKG
DAVLVDSPLNLAVGTEPVTDLSLNLVTGGILRGTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013784Carb-bd-like_fold