prot_M-pyrifera_M_contig9427.21765.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9427.21765.1
Unique Nameprot_M-pyrifera_M_contig9427.21765.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig9427.21765.1 vs. uniprot
Match: D8LKH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH5_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.030e-59
Identity = 108/187 (57.75%), Postives = 128/187 (68.45%), Query Frame = 0 
Query:    1 MLRQVIRVLSDPASAGAGGNPDEPLLLVQKLAVDEADAVFGAFDGRFVKHVSDAGAWSPLPGGFNRWAERYHRKVLRKSRPVLIAVHGDDVCALEDELSLEARM--EAAGVTQAGIGDI------ASQATGRRMPGFGEEFEVPFRYLPIGFGGFETRNGLPQTAYIDAAKQQLEIL-ETCPTAQAG 178
            MLRQV++VL+DP SAG GG PDEPLLLVQKLA+DE DA+FGAF+ RF+ + +DAG+WSPLPGGF+RW  RYHR  L  SRPVL  VHGDDVCALE EL L  R+  EA GVT   I D       AS + G R     E  +V      +     ETR+GLP TAYIDAA++Q E+L ETCP  +AG
Sbjct:    1 MLRQVVKVLTDPTSAGLGGRPDEPLLLVQKLALDETDAIFGAFEPRFLGYAADAGSWSPLPGGFSRWLARYHRVALHGSRPVLATVHGDDVCALEKELYLGVRVPSEAGGVTPNDIIDSIAEEPPASASAGFRRQATNERGKVSIPADRVR----ETRSGLPHTAYIDAARRQPEVLIETCPIDRAG 183
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9427.21765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LKH5_ECTSI1.030e-5957.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9427contigM-pyrifera_M_contig9427:3707..7821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9427.21765.1mRNA_M-pyrifera_M_contig9427.21765.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9427 3707..7821 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9427.21765.1 ID=prot_M-pyrifera_M_contig9427.21765.1|Name=mRNA_M-pyrifera_M_contig9427.21765.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
MLRQVIRVLSDPASAGAGGNPDEPLLLVQKLAVDEADAVFGAFDGRFVKH
VSDAGAWSPLPGGFNRWAERYHRKVLRKSRPVLIAVHGDDVCALEDELSL
EARMEAAGVTQAGIGDIASQATGRRMPGFGEEFEVPFRYLPIGFGGFETR
NGLPQTAYIDAAKQQLEILETCPTAQAGR*
back to top