prot_M-pyrifera_M_contig94213.21758.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig94213.21758.1
Unique Nameprot_M-pyrifera_M_contig94213.21758.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length221
Homology
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BLAST of mRNA_M-pyrifera_M_contig94213.21758.1 vs. uniprot
Match: A0A2M8B747_9DELT (PMT_2 domain-containing protein n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A2M8B747_9DELT)

HSP 1 Score: 53.9 bits (128), Expect = 6.800e-5
Identity = 45/144 (31.25%), Postives = 66/144 (45.83%), Query Frame = 0 
Query:    2 HHPALYTHLIALSLRVFGNVEWAVRIVPLTFSMLSLLIAARCLRRWFGAEVALFAAAWMAALPLFAWYGMLPWTEGVLVGIGCLQLGAYARWCAAGPGAARRAFLVMCGWQFVAVLFDWTGAFMCVGIGLHALCFGRWRRFAKL 145
            HHP L    +A+   +FG  EWA R+VP  +S+LS  +    +RR +G+ VA+ +      LP+   Y  +   E   +    + L  Y R    G   ARR    +    F+A  FDW   ++   + LHAL  G  R   KL
Sbjct:   82 HHPLLLHLHVAVMFVLFGEHEWAARLVPAIYSVLSAAMLYFLVRRLWGSRVAVVSLFVFVCLPIDLIYANMVDHEQGSIFWSLVMLHHYLRLRETG---ARRNLWGLLAATFMACQFDWPPYYIAFFLFLHALVGGLRRHPVKL 222
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig94213.21758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2M8B747_9DELT6.800e-531.25PMT_2 domain-containing protein n=2 Tax=unclassifi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038731Glycosyltransferase RgtA/B/C/D-likePFAMPF13231PMT_2coord: 2..154
e-value: 1.0E-10
score: 42.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 168..221
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 146..168
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 23..40
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig94213contigM-pyrifera_M_contig94213:3..665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig94213.21758.1mRNA_M-pyrifera_M_contig94213.21758.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig94213 3..665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig94213.21758.1 ID=prot_M-pyrifera_M_contig94213.21758.1|Name=mRNA_M-pyrifera_M_contig94213.21758.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
THHPALYTHLIALSLRVFGNVEWAVRIVPLTFSMLSLLIAARCLRRWFGA
EVALFAAAWMAALPLFAWYGMLPWTEGVLVGIGCLQLGAYARWCAAGPGA
ARRAFLVMCGWQFVAVLFDWTGAFMCVGIGLHALCFGRWRRFAKLLWLGV
PIFLAAGLHALHMNLVLGGLHQATETKATLAAVTALPTETLAEFVRLQFG
HARRFLGLPAYVLVLAGALVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038731RgtA/B/C-like