prot_M-pyrifera_M_contig9408.21712.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9408.21712.1
Unique Nameprot_M-pyrifera_M_contig9408.21712.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length307
Homology
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BLAST of mRNA_M-pyrifera_M_contig9408.21712.1 vs. uniprot
Match: A0A6H5K9K8_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K8_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 4.350e-28
Identity = 116/318 (36.48%), Postives = 138/318 (43.40%), Query Frame = 0 
Query:   28 GVATVVNVHLGNQDTEDNHNQVTGLLSLLEDL----LDTSRLPEG---RMNNQRPLTPTSMSPEGERDGG--LALMGGGGGSGHQRPRLLIVAGDFNFNATSTGYRRLVGEGGLESAA---------------------------------AXXXXXXXLTNGIXXXXRDWARARVLRGKXXXEAGNGVEEGEGRAGDSAALDEYAGDDDGNVGXXXXXXDWSGRGGVDRIGVGDGVGGRGVDADGGDXXXXXXXXXXXXXXXXXXXXXXDDAPLDFVFFSSGPGAYFA-AYEVHREFSQERYADGYPSVTDFDVSCP 302
            GVATVVNVHLGN+   D   QVTGLLSLLEDL    L T  L E    R +   P T      +  R  G  LA+ G       +  RLLIV GDFNF +TS+GYRR+V EGGL+SAA                                           +G+    R+  R+ V  G     A  GV  G               ++DG+                D +GVG G GG   D D GD                      +   LDFVFFS+G G     +YEVHREFSQERYADGYPSV +F+VSCP
Sbjct:    2 GVATVVNVHLGNEG--DTEKQVTGLLSLLEDLRAGNLRTRDLRERDGIRRDQHMPKTSNQRRRKLRRKKGEDLAVRGL-----DEDRRLLIVVGDFNFESTSSGYRRMVSEGGLQSAANVSAEAAEAEATGWFPPATASNFPAIIPNYPVKVYHPAPKLADDGVVPDKREVLRSLVGDGAAAVNASEGVAGGV--------------ENDGHRN--------------DALGVGSGSGGVVDDFDDGDVVGGVSAMRVDTFVAGDAD---NRGALDFVFFSAGGGGISCRSYEVHREFSQERYADGYPSVAEFEVSCP 281
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BLAST of mRNA_M-pyrifera_M_contig9408.21712.1 vs. uniprot
Match: D7FZJ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ1_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 2.980e-14
Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:    1 WGWRRLPRGSGENACEVHATLSLGEGRGVATVVNVHLGNQ-DTE 43
            WGWRRLPRG GENAC VHATLSLG G GVATVVNVHLGN+ DTE
Sbjct:  102 WGWRRLPRGPGENACVVHATLSLGGGMGVATVVNVHLGNEGDTE 145
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9408.21712.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K9K8_9PHAE4.350e-2836.48Endo/exonuclease/phosphatase domain-containing pro... [more]
D7FZJ1_ECTSI2.980e-1486.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 17..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9408contigM-pyrifera_M_contig9408:938..2540 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9408.21712.1mRNA_M-pyrifera_M_contig9408.21712.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9408 938..2540 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9408.21712.1 ID=prot_M-pyrifera_M_contig9408.21712.1|Name=mRNA_M-pyrifera_M_contig9408.21712.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=307bp
WGWRRLPRGSGENACEVHATLSLGEGRGVATVVNVHLGNQDTEDNHNQVT
GLLSLLEDLLDTSRLPEGRMNNQRPLTPTSMSPEGERDGGLALMGGGGGS
GHQRPRLLIVAGDFNFNATSTGYRRLVGEGGLESAAAAAATSLELTNGIG
SGSRDWARARVLRGKGEGEAGNGVEEGEGRAGDSAALDEYAGDDDGNVGG
GGGGGDWSGRGGVDRIGVGDGVGGRGVDADGGDDDDDAAAADDDDDDDGD
GGGSEDDAPLDFVFFSSGPGAYFAAYEVHREFSQERYADGYPSVTDFDVS
CPLPPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf